Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen02g004370 Solanum pennellii HOM05D006266 ORTHO05D008016 5.8e-112 407.5 200 100.0
Sopen12g011050 Solanum pennellii HOM05D006266 ORTHO05D008016 6.5e-95 350.9 170 99.4
Solyc12g021170.2 Solanum lycopersicum HOM05D006266 ORTHO05D008016 4.2e-94 348.2 170 98.2
CAN.G51.9 Capsicum annuum HOM05D006266 ORTHO05D008016 5.9e-88 327.8 182 85.2
Nitab4.5_0000505g0020 Nicotiana tabacum HOM05D006266 ORTHO05D008016 7.9e-85 317.4 173 89.6
Nitab4.5_0001990g0030 Nicotiana tabacum HOM05D006266 ORTHO05D008016 7.4e-83 310.8 173 87.9
vmacro00635 Vaccinium macrocarpon HOM05D006266 ORTHO05D008016 2.2e-79 299.3 192 76.0
AUR62023848 Chenopodium quinoa HOM05D006266 ORTHO05D008016 5.0e-79 298.1 177 78.5
Hund12414 Selenicereus undatus HOM05D006266 ORTHO05D008016 5.0e-79 298.1 170 81.8
Gohir.A10G139200 Gossypium hirsutum HOM05D006266 ORTHO05D008016 1.4e-78 296.6 170 82.9
Oeu024477.1 Olea europaea HOM05D006266 ORTHO05D008016 5.5e-78 294.7 170 83.5
SGA_v2.0_scaffold17G08154 Striga asiatica HOM05D006266 ORTHO05D008016 7.2e-78 294.3 170 82.4
Aqoxy2G04160 Aquilegia oxysepala HOM05D006266 ORTHO05D008016 9.4e-78 293.9 170 81.8
Gohir.D10G127600 Gossypium hirsutum HOM05D006266 ORTHO05D008016 1.2e-77 293.5 170 81.8
Gorai.011G140700 Gossypium raimondii HOM05D006266 ORTHO05D008016 1.2e-77 293.5 170 81.8
GSVIVG01010835001 Vitis vinifera HOM05D006266 ORTHO05D008016 1.6e-77 293.1 170 80.6
EL10Ac3g06005 Beta vulgaris HOM05D006266 ORTHO05D008016 2.7e-77 292.4 171 80.7
Prupe.1G197500 Prunus persica HOM05D006266 ORTHO05D008016 2.7e-77 292.4 170 81.2
Sc19g0002870 Simmondsia chinensis HOM05D006266 ORTHO05D008016 2.7e-77 292.4 170 81.2
Cpa.g.sc9.312 Carica papaya HOM05D006266 ORTHO05D008016 3.6e-77 292.0 164 84.1
Dinv44175 Davidia involucrata HOM05D006266 ORTHO05D008016 4.6e-77 291.6 170 81.8
CDE09G1029 Ceratophyllum demersum HOM05D006266 ORTHO05D008016 6.1e-77 291.2 170 79.4
CANSAT78G1968 Cannabis sativa HOM05D006266 ORTHO05D008016 1.4e-76 290.0 170 80.0
arahy.Tifrunner.gnm1.ann1.D6UD48 Arachis hypogaea HOM05D006266 ORTHO05D008016 1.8e-76 289.7 170 80.0
arahy.Tifrunner.gnm1.ann1.JU07H9 Arachis hypogaea HOM05D006266 ORTHO05D008016 1.8e-76 289.7 170 80.0
Nn7g37595 Nelumbo nucifera HOM05D006266 ORTHO05D008016 1.8e-76 289.7 170 78.8
ClCG05G007190 Citrullus lanatus HOM05D006266 ORTHO05D008016 2.3e-76 289.3 170 80.0
Ciclev10019615m.g Citrus clementina HOM05D006266 ORTHO05D008016 2.3e-76 289.3 170 80.6
CsaV3_3G015950 Cucumis sativus L. HOM05D006266 ORTHO05D008016 2.3e-76 289.3 170 80.0
Potri.017G027500 Populus trichocarpa HOM05D006266 ORTHO05D008016 3.0e-76 288.9 170 80.0
PSO675G5931 Papaver somniferum HOM05D006266 ORTHO05D008016 5.1e-76 288.1 170 80.6
QL10p050722 Quercus lobata HOM05D006266 ORTHO05D008016 5.1e-76 288.1 199 73.4
Sabra17G0016500 Salix brachista HOM05D006266 ORTHO05D008016 5.1e-76 288.1 170 79.4
ATR0743G015 Amborella trichopoda HOM05D006266 ORTHO05D008016 6.7e-76 287.7 170 77.6
Migut.G01347 Erythranthe guttata HOM05D006266 ORTHO05D008016 1.5e-75 286.6 170 80.6
Thecc.04G175700 Theobroma cacao HOM05D006266 ORTHO05D008016 1.5e-75 286.6 170 78.8
DCAR_028531 Daucus carota HOM05D006266 ORTHO05D008016 2.0e-75 286.2 170 78.8
Manes.11G123500 Manihot esculenta HOM05D006266 ORTHO05D008016 2.0e-75 286.2 170 78.8
Glyma.15G029200 Glycine max HOM05D006266 ORTHO05D008016 3.3e-75 285.4 170 77.1
CiPaw.02G052400 Carya illinoinensis HOM05D006266 ORTHO05D008016 4.4e-75 285.0 170 78.8
Lalb_Chr14g0372511 Lupinus albus HOM05D006266 ORTHO05D008016 4.4e-75 285.0 170 77.6
Medtr2g099040 Medicago truncatula HOM05D006266 ORTHO05D008016 5.7e-75 284.6 170 77.6
TPR.G18865 Trifolium pratense HOM05D006266 ORTHO05D008016 5.7e-75 284.6 170 77.6
TAR362G0699 Trochodendron aralioides HOM05D006266 ORTHO05D008016 5.7e-75 284.6 170 77.1
PSO017G5469 Papaver somniferum HOM05D006266 ORTHO05D008016 7.4e-75 284.3 170 78.8
Cfa015189 Carpinus fangiana HOM05D006266 ORTHO05D008016 1.3e-74 283.5 164 82.9
MD04G1042900 Malus domestica HOM05D006266 ORTHO05D008016 1.3e-74 283.5 172 77.3
Duzib151G0889 Durio zibethinus HOM05D006266 ORTHO05D008016 1.7e-74 283.1 169 78.7
Ah.07g202330 Amaranthus hybridus HOM05D006266 ORTHO05D008016 2.2e-74 282.7 164 79.9
MSTRG.4284 Avicennia marina HOM05D006266 ORTHO05D008016 2.2e-74 282.7 177 76.8
Lj3g0007796 Lotus japonicus HOM05D006266 ORTHO05D008016 2.8e-74 282.3 170 76.5
Psat5g289640 Pisum sativum HOM05D006266 ORTHO05D008016 2.8e-74 282.3 170 76.5
FvH4_4g10960 Fragaria vesca HOM05D006266 ORTHO05D008016 6.3e-74 281.2 170 76.5
PGR142G3304 Punica granatum HOM05D006266 ORTHO05D008016 6.3e-74 281.2 168 79.8
Cc03_g11980 Coffea canephora HOM05D006266 ORTHO05D008016 8.2e-74 280.8 171 78.9
Eucgr.H00345 Eucalyptus grandis HOM05D006266 ORTHO05D008016 8.2e-74 280.8 170 74.7
Aa31LG1G25150 Aethionema arabicum HOM05D006266 ORTHO05D008016 1.1e-73 280.4 170 76.5
FAN12G3251 Fragaria x ananassa HOM05D006266 ORTHO05D008016 1.1e-73 280.4 169 76.9
Sp4g25480 Schrenkiella parvula HOM05D006266 ORTHO05D008016 1.1e-73 280.4 170 74.7
Sed0000993 Sechium edule HOM05D006266 ORTHO05D008016 1.1e-73 280.4 170 77.6
THA.LOC104805138 Tarenaya hassleriana HOM05D006266 ORTHO05D008016 1.1e-73 280.4 170 76.5
Thhalv10001353m.g Eutrema salsugineum HOM05D006266 ORTHO05D008016 1.4e-73 280.0 170 74.7
Ca_01251_v3 Cicer arietinum L. HOM05D006266 ORTHO05D008016 1.8e-73 279.6 170 75.9
Atru.chr4.1256 Acer truncatum HOM05D006266 ORTHO05D008016 3.1e-73 278.9 170 75.3
RcHm_v2.0_Chr4g0406421 Rosa chinensis HOM05D006266 ORTHO05D008016 3.1e-73 278.9 170 76.5
HanXRQChr01g0023481 Helianthus annuus HOM05D006266 ORTHO05D008016 4.1e-73 278.5 170 77.1
MBI07_g02893_MAGBIO Magnolia biondii HOM05D006266 ORTHO05D008016 4.1e-73 278.5 164 78.0
AT2G43400 Arabidopsis thaliana HOM05D006266 ORTHO05D008016 5.3e-73 278.1 170 74.7
C04p04440 Brassica napus HOM05D006266 ORTHO05D008016 1.2e-72 276.9 170 73.5
BolC4t22077H Brassica oleracea HOM05D006266 ORTHO05D008016 1.2e-72 276.9 170 73.5
A05p03740 Brassica napus HOM05D006266 ORTHO05D008016 1.5e-72 276.6 170 73.5
BraA05t19361Z Brassica rapa HOM05D006266 ORTHO05D008016 1.5e-72 276.6 170 73.5
Lsat_1_v5_gn_1_77821 Lactuca sativa HOM05D006266 ORTHO05D008016 2.0e-72 276.2 170 75.9
VMungo1080G0961 Vigna mungo HOM05D006266 ORTHO05D008016 2.6e-72 275.8 169 75.1
AL4G42140 Arabidopsis lyrata HOM05D006266 ORTHO05D008016 4.5e-72 275.0 170 74.1
BcaC02g12401 Brassica carinata HOM05D006266 ORTHO05D008016 4.5e-72 275.0 170 72.9
Carub.0004s2587 Capsella rubella HOM05D006266 ORTHO05D008016 4.5e-72 275.0 170 73.5
Phvul.005G153800 Phaseolus vulgaris HOM05D006266 ORTHO05D008016 7.7e-72 274.2 170 73.5
SEGI_14637 Sequoiadendron giganteum HOM05D006266 ORTHO05D008016 3.8e-71 271.9 171 75.4
HPP92_022167 Vanilla planifolia HOM05D006266 ORTHO05D008016 5.0e-71 271.6 173 72.8
Mapoly0012s0124 Marchantia polymorpha HOM05D006266 ORTHO05D008016 6.5e-71 271.2 171 74.9
CARHR138470 Cardamine hirsuta HOM05D006266 ORTHO05D008016 2.5e-70 269.2 170 71.2
Pp3c26_13090 Physcomitrium patens HOM05D006266 ORTHO05D008016 7.2e-70 267.7 173 73.4
Rhsim09G0023000 Rhododendron simsii HOM05D006266 ORTHO05D008016 6.1e-69 264.6 239 58.2
AagrBONN_evm.TU.Sc2ySwM_117.3933 Anthoceros agrestis HOM05D006266 ORTHO05D008016 1.0e-68 263.8 171 71.9
FAN17G0658 Fragaria x ananassa HOM05D006266 ORTHO05D008016 1.5e-67 260.0 155 78.1
SMO141G0282 Selaginella moellendorffii HOM05D006266 ORTHO05D008016 3.1e-65 252.3 170 69.4
Actinidia27081 Actinidia chinensis HOM05D006266 ORTHO05D008016 7.0e-65 251.1 170 71.8
Lj3C1G0 Lonicera japonica HOM05D006266 ORTHO05D008016 5.9e-64 248.1 133 88.7
Lj3C32G4 Lonicera japonica HOM05D006266 ORTHO05D008016 5.9e-64 248.1 133 88.7
Peaxi162Scf00184g00418 Petunia axillaris HOM05D006266 ORTHO05D008016 1.0e-63 247.3 164 77.4
Zm00001eb043590 Zea mays HOM05D006266 ORTHO05D008016 8.5e-63 244.2 168 67.3
Haze_01464 Corylus avellana HOM05D006266 ORTHO05D008016 1.1e-62 243.8 275 50.5
ECA248G0977 Erigeron canadensis HOM05D006266 ORTHO05D008016 1.8e-60 236.5 147 73.5
unitig_52.g17681 Utricularia gibba HOM05D006266 ORTHO05D008016 1.2e-51 207.2 170 61.8
Haze_26951 Corylus avellana HOM05D006266 ORTHO05D008016 6.3e-50 201.4 178 55.1
Os10g0516300 Oryza sativa ssp. japonica HOM05D006266 ORTHO05D008016 8.3e-50 201.1 116 76.7
PRCOL_00003135 Prasinoderma coloniale HOM05D006266 ORTHO05D008016 2.9e-47 192.6 178 54.5
CSS0016449 Camellia sinensis var. sinensis HOM05D006266 ORTHO05D008016 3.8e-47 192.2 104 86.5
Cre02.g094300 Chlamydomonas reinhardtii HOM05D006266 ORTHO05D008016 8.6e-47 191.0 175 56.6
Cfa026422 Carpinus fangiana HOM05D006266 ORTHO05D008016 2.6e-43 179.5 169 53.3
Haze_26227 Corylus avellana HOM05D006266 ORTHO05D008016 3.4e-43 179.1 172 52.3
Hma1.2p1_0324F.1_g125550 Hydrangea macrophylla HOM05D006266 ORTHO05D008016 4.4e-43 178.7 101 82.2
Dinv44151 Davidia involucrata HOM05D006266 ORTHO05D008016 2.3e-39 166.4 111 72.1
SEGI_11902 Sequoiadendron giganteum HOM05D006266 ORTHO05D008016 6.8e-36 154.8 102 71.6
MELO3C006791.2 Cucumis melo HOM05D005231 ORTHO05D006387 1.2e-27 127.5 69 85.5
SEGI_29623 Sequoiadendron giganteum HOM05D006266 ORTHO05D008016 3.7e-26 122.5 68 82.4
Hma1.2p1_0324F.1_g125560 Hydrangea macrophylla HOM05D006266 ORTHO05D008016 4.6e-24 115.5 66 81.8
AUR62002342 Chenopodium quinoa HOM05D006266 ORTHO05D008016 6.0e-24 115.2 96 60.4
MELO3C006793.2 Cucumis melo HOM05D006266 ORTHO05D008016 4.7e-21 105.5 66 75.8
arahy.Tifrunner.gnm1.ann1.QA6FBH Arachis hypogaea HOM05D006266 ORTHO05D008016 1.4e-12 77.4 42 88.1
Sp4g25500 Schrenkiella parvula HOM05D000001 ORTHO05D000003 3.9e-07 59.3 35 71.4


User provided reference genes

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