Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen02g001110 Solanum pennellii HOM05D003641 ORTHO05D004915 2.5e-44 181.8 95 100.0
PGSC0003DMG400011447 Solanum tuberosum HOM05D003641 ORTHO05D004915 6.3e-24 114.0 97 67.0
Sopen10g029550 Solanum pennellii HOM05D003641 ORTHO05D004915 2.7e-22 108.6 97 62.9
Solyc10g078930.2 Solanum lycopersicum HOM05D003641 ORTHO05D004915 3.5e-22 108.2 97 62.9
CAN.G960.10 Capsicum annuum HOM05D003641 ORTHO05D004915 1.5e-20 102.8 99 64.6
Nitab4.5_0000105g0210 Nicotiana tabacum HOM05D003641 ORTHO05D004915 3.4e-17 91.7 95 61.1
Nitab4.5_0002343g0010 Nicotiana tabacum HOM05D003641 ORTHO05D004915 3.7e-16 88.2 98 59.2
Nitab4.5_0007274g0010 Nicotiana tabacum HOM05D003641 ORTHO05D004915 9.5e-12 73.6 97 50.5
Nitab4.5_0001137g0010 Nicotiana tabacum HOM05D003641 ORTHO05D004915 4.7e-11 71.2 96 50.0
Peaxi162Scf00258g00921 Petunia axillaris HOM05D003641 ORTHO05D004915 5.2e-10 67.8 98 46.9
SalBow6G5303 Salvia bowleyana HOM05D003641 ORTHO05D004915 5.2e-10 67.8 98 44.9
vmacro07894 Vaccinium macrocarpon HOM05D003641 ORTHO05D004915 5.2e-10 67.8 95 46.3
Ca_08533_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 8.8e-10 67.0 106 42.5
FvH4_6g21990 Fragaria vesca HOM05D003641 ORTHO05D004915 1.2e-09 66.6 94 45.7
FAN14G0097 Fragaria x ananassa HOM05D003641 ORTHO05D004915 1.2e-09 66.6 94 45.7
DCAR_017036 Daucus carota HOM05D003641 ORTHO05D004915 1.5e-09 66.2 97 47.4
MBI19_g17419_MAGBIO Magnolia biondii HOM05D003641 ORTHO05D004915 4.4e-09 64.7 95 47.4
TAR636G0728 Trochodendron aralioides HOM05D003641 ORTHO05D004915 4.4e-09 64.7 94 45.7
ECA248G0025 Erigeron canadensis HOM05D003641 ORTHO05D004915 5.7e-09 64.3 95 45.3
TAR633G0428 Trochodendron aralioides HOM05D003641 ORTHO05D004915 7.5e-09 63.9 95 43.2
MD14G1054700 Malus domestica HOM05D003641 ORTHO05D004915 1.3e-08 63.2 95 44.2
BraA05t22525Z Brassica rapa HOM05D003641 ORTHO05D004915 1.7e-08 62.8 97 45.4
CARHR086620 Cardamine hirsuta HOM05D003641 ORTHO05D004915 2.2e-08 62.4 105 42.9
Sp3g10280 Schrenkiella parvula HOM05D003641 ORTHO05D004915 2.2e-08 62.4 105 41.9
Nn7g35971 Nelumbo nucifera HOM05D003641 ORTHO05D004915 2.8e-08 62.0 94 41.5
AL3G23660 Arabidopsis lyrata HOM05D003641 ORTHO05D004915 3.7e-08 61.6 106 42.5
SGA_v2.0_scaffold105G30499 Striga asiatica HOM05D003641 ORTHO05D004915 3.7e-08 61.6 100 45.0
Cc06_g15710 Coffea canephora HOM05D003641 ORTHO05D004915 4.9e-08 61.2 52 59.6
Haze_20012 Corylus avellana HOM05D003641 ORTHO05D004915 6.3e-08 60.8 95 41.1
TWI53G2154 Tripterygium wilfordii HOM05D003641 ORTHO05D004915 6.3e-08 60.8 97 41.2
Lj2A365T90 Lonicera japonica HOM05D003641 ORTHO05D004915 8.3e-08 60.5 103 43.7
Sabra06G0149100 Salix brachista HOM05D003641 ORTHO05D004915 8.3e-08 60.5 99 45.5
A05p37290 Brassica napus HOM05D003641 ORTHO05D004915 1.1e-07 60.1 99 44.4
Manes.09G037400 Manihot esculenta HOM05D003641 ORTHO05D004915 1.1e-07 60.1 95 45.3
Oeu063867.1 Olea europaea HOM05D003641 ORTHO05D004915 1.1e-07 60.1 94 40.4
C05p55760 Brassica napus HOM05D003641 ORTHO05D004915 1.4e-07 59.7 98 43.9
BolC5t34243H Brassica oleracea HOM05D003641 ORTHO05D004915 1.4e-07 59.7 98 43.9
Cfa020150 Carpinus fangiana HOM05D003641 ORTHO05D004915 1.4e-07 59.7 95 40.0
CiPaw.10G025600 Carya illinoinensis HOM05D003641 ORTHO05D004915 1.4e-07 59.7 96 37.5
Potri.006G194400 Populus trichocarpa HOM05D003641 ORTHO05D004915 1.4e-07 59.7 96 45.8
AT3G12050 Arabidopsis thaliana HOM05D003641 ORTHO05D004915 1.8e-07 59.3 106 43.4
BcaB06g25550 Brassica carinata HOM05D003641 ORTHO05D004915 1.8e-07 59.3 96 44.8
Oeu006209.1 Olea europaea HOM05D003641 ORTHO05D004915 1.8e-07 59.3 109 41.3
CiPaw.09G029000 Carya illinoinensis HOM05D003641 ORTHO05D004915 2.4e-07 58.9 97 40.2
Aa31sc80G90 Aethionema arabicum HOM05D003641 ORTHO05D004915 4.1e-07 58.2 105 41.0
PSO135G0566 Papaver somniferum HOM05D003641 ORTHO05D004915 5.4e-07 57.8 97 41.2
Psat3g067000 Pisum sativum HOM05D003641 ORTHO05D004915 5.4e-07 57.8 101 41.6
Rhsim03G0004900 Rhododendron simsii HOM05D003641 ORTHO05D004915 5.4e-07 57.8 97 43.3
Sc13g0002360 Simmondsia chinensis HOM05D003641 ORTHO05D004915 5.4e-07 57.8 94 40.4
TWI74G1529 Tripterygium wilfordii HOM05D003641 ORTHO05D004915 9.2e-07 57.0 97 40.2
HPP92_009321 Vanilla planifolia HOM05D003641 ORTHO05D004915 1.2e-06 56.6 102 45.1
Duzib128G0491 Durio zibethinus HOM05D003641 ORTHO05D004915 1.6e-06 56.2 98 42.9
unitig_746.g26803 Utricularia gibba HOM05D003641 ORTHO05D004915 2.0e-06 55.8 94 37.2
Migut.J01850 Erythranthe guttata HOM05D003641 ORTHO05D004915 2.7e-06 55.5 55 52.7
Actinidia14376 Actinidia chinensis HOM05D003641 ORTHO05D004915 3.5e-06 55.1 95 42.1
EL10Ac3g06892 Beta vulgaris HOM05D003641 ORTHO05D004915 3.5e-06 55.1 94 42.6
FAN02G1826 Fragaria x ananassa HOM05D003641 ORTHO05D004915 3.5e-06 55.1 94 39.4
Hund24813 Selenicereus undatus HOM05D003641 ORTHO05D004915 3.5e-06 55.1 99 37.4
Ciclev10012043m.g Citrus clementina HOM05D003641 ORTHO05D004915 4.5e-06 54.7 107 42.1
Sabra16G0062900 Salix brachista HOM05D003641 ORTHO05D004915 4.5e-06 54.7 94 42.6
CSS0018208 Camellia sinensis var. sinensis HOM05D003641 ORTHO05D004915 5.9e-06 54.3 94 42.6
Gohir.D04G089500 Gossypium hirsutum HOM05D003641 ORTHO05D004915 5.9e-06 54.3 101 41.6
Sed0007356 Sechium edule HOM05D003641 ORTHO05D004915 5.9e-06 54.3 97 40.2
Actinidia22049 Actinidia chinensis HOM05D003641 ORTHO05D004915 7.8e-06 53.9 54 55.6
Ah.04g152830 Amaranthus hybridus HOM05D003641 ORTHO05D004915 7.8e-06 53.9 95 37.9
CDE05G2508 Ceratophyllum demersum HOM05D003641 ORTHO05D004915 7.8e-06 53.9 94 42.6
FAN05G2657 Fragaria x ananassa HOM05D003641 ORTHO05D004915 7.8e-06 53.9 94 37.2
Lju124A24T32 Lonicera japonica HOM05D003641 ORTHO05D004915 7.8e-06 53.9 95 38.9


User provided reference genes

Program Settings