Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen01g053860 Solanum pennellii HOM05D007970 ORTHO05D009943 4.9e-60 234.2 112 100.0
Solyc01g111820.2 Solanum lycopersicum HOM05D007970 ORTHO05D009943 3.2e-51 204.9 112 90.2
PGSC0003DMG400018628 Solanum tuberosum HOM05D007970 ORTHO05D009943 5.5e-43 177.6 97 87.6
Nitab4.5_0013642g0020 Nicotiana tabacum HOM05D007970 ORTHO05D009943 1.0e-36 156.8 106 70.8
CAN.G588.103 Capsicum annuum HOM05D007970 ORTHO05D009943 1.4e-35 152.9 105 70.5
Peaxi162Scf00362g00411 Petunia axillaris HOM05D007970 ORTHO05D009943 1.8e-33 146.0 105 63.8
Oeu015553.1 Olea europaea HOM05D007970 ORTHO05D009943 7.4e-24 114.0 101 58.4
Dinv41914 Davidia involucrata HOM05D007970 ORTHO05D009943 1.4e-22 109.8 106 61.3
Oeu045100.1 Olea europaea HOM05D007970 ORTHO05D009943 4.5e-21 104.8 104 51.9
Actinidia18037 Actinidia chinensis HOM05D007970 ORTHO05D009943 2.2e-20 102.4 99 52.5
Actinidia14361 Actinidia chinensis HOM05D007970 ORTHO05D009943 5.0e-20 101.3 109 47.7
Actinidia21480 Actinidia chinensis HOM05D007970 ORTHO05D009943 5.0e-20 101.3 109 47.7
Nitab4.5_0004867g0050 Nicotiana tabacum HOM05D007970 ORTHO05D009943 8.5e-20 100.5 68 67.6
Rhsim11G0193700 Rhododendron simsii HOM05D007970 ORTHO05D009943 1.5e-19 99.8 97 55.7
vmacro17329 Vaccinium macrocarpon HOM05D007970 ORTHO05D009943 2.5e-19 99.0 109 53.2
CSS0030284 Camellia sinensis var. sinensis HOM05D007970 ORTHO05D009943 4.2e-19 98.2 111 50.5
Nitab4.5_0000079g0240 Nicotiana tabacum HOM05D007970 ORTHO05D009943 1.2e-18 96.7 62 69.4
Rhsim05G0052900 Rhododendron simsii HOM05D007970 ORTHO05D009943 1.6e-18 96.3 106 50.0
Peaxi162Scf00078g00137 Petunia axillaris HOM05D007970 ORTHO05D009943 4.7e-18 94.7 67 64.2
TWI31G1200 Tripterygium wilfordii HOM05D007970 ORTHO05D009943 1.4e-17 93.2 96 52.1
Oeu028958.1 Olea europaea HOM05D007970 ORTHO05D009943 1.8e-17 92.8 106 45.3
SalBow1G1176 Salvia bowleyana HOM05D007970 ORTHO05D009943 3.0e-17 92.0 100 48.0
Hma1.2p1_0032F.1_g019140 Hydrangea macrophylla HOM05D007970 ORTHO05D009943 2.0e-16 89.4 106 49.1
Actinidia20529 Actinidia chinensis HOM05D007970 ORTHO05D009943 8.2e-15 84.0 73 56.2
Manes.11G099100 Manihot esculenta HOM05D007970 ORTHO05D009943 1.4e-14 83.2 111 43.2
Migut.N01333 Erythranthe guttata HOM05D007970 ORTHO05D009943 1.8e-14 82.8 94 50.0
TAR376G1232 Trochodendron aralioides HOM05D007970 ORTHO05D009943 1.8e-14 82.8 112 41.1
SGA_v2.0_scaffold195G40813 Striga asiatica HOM05D007970 ORTHO05D009943 4.1e-14 81.6 84 51.2
Dinv14128 Davidia involucrata HOM05D007970 ORTHO05D009943 5.3e-14 81.3 91 51.6
TWI75G1150 Tripterygium wilfordii HOM05D007970 ORTHO05D009943 7.0e-14 80.9 92 47.8
FAN27G0083 Fragaria x ananassa HOM05D007970 ORTHO05D009943 1.6e-13 79.7 109 38.5
COL.COLO4_36729 Corchorus olitorius HOM05D007970 ORTHO05D009943 3.5e-13 78.6 102 42.2
Migut.B00057 Erythranthe guttata HOM05D007970 ORTHO05D009943 3.5e-13 78.6 99 43.4
SGA_v2.0_scaffold32G13308 Striga asiatica HOM05D007970 ORTHO05D009943 3.5e-13 78.6 94 44.7
Lsat_1_v5_gn_4_72040 Lactuca sativa HOM05D007970 ORTHO05D009943 5.9e-13 77.8 88 56.8
Prupe.8G169400 Prunus persica HOM05D007970 ORTHO05D009943 1.3e-12 76.6 94 44.7
Sabra04G0119900 Salix brachista HOM05D007970 ORTHO05D009943 1.3e-12 76.6 113 38.9
FAN20G1196 Fragaria x ananassa HOM05D007970 ORTHO05D009943 2.2e-12 75.9 107 38.3
Cfa005290 Carpinus fangiana HOM05D007970 ORTHO05D009943 2.9e-12 75.5 92 46.7
Peaxi162Scf00373g00094 Petunia axillaris HOM05D007970 ORTHO05D009943 2.9e-12 75.5 52 65.4
Thecc.02G055100 Theobroma cacao HOM05D007970 ORTHO05D009943 2.9e-12 75.5 80 47.5
Nn5g30844 Nelumbo nucifera HOM05D007970 ORTHO05D006261 3.8e-12 75.1 112 39.3
Potri.004G178101 Populus trichocarpa HOM05D007970 ORTHO05D009943 3.8e-12 75.1 108 38.9
FAN15G0059 Fragaria x ananassa HOM05D007970 ORTHO05D009943 5.0e-12 74.7 107 38.3
FvH4_2g15690 Fragaria vesca HOM05D007970 ORTHO05D009943 6.5e-12 74.3 108 38.0
Haze_02097 Corylus avellana HOM05D007970 ORTHO05D009943 1.1e-11 73.6 118 40.7
Lj9P400T40 Lonicera japonica HOM05D007970 ORTHO05D009943 1.1e-11 73.6 81 50.6
Manes.04G070700 Manihot esculenta HOM05D007970 ORTHO05D009943 1.9e-11 72.8 108 41.7
RcHm_v2.0_Chr6g0278991 Rosa chinensis HOM05D007970 ORTHO05D009943 2.5e-11 72.4 107 40.2
FAN24G2575 Fragaria x ananassa HOM05D007970 ORTHO05D009943 3.2e-11 72.0 98 40.8
Gohir.A04G131900 Gossypium hirsutum HOM05D007970 ORTHO05D009943 4.2e-11 71.6 96 44.8
Cpa.g.sc20.116 Carica papaya HOM05D007970 ORTHO05D009943 5.5e-11 71.2 112 40.2
SGA_v2.0_scaffold58G20343 Striga asiatica HOM05D007970 ORTHO05D009943 9.4e-11 70.5 102 38.2
Duzib248G1052 Durio zibethinus HOM05D007970 ORTHO05D009943 1.2e-10 70.1 80 45.0
Gorai.012G156800 Gossypium raimondii HOM05D007970 ORTHO05D009943 2.7e-10 68.9 96 42.7
Gohir.D04G168500 Gossypium hirsutum HOM05D007970 ORTHO05D009943 3.6e-10 68.6 96 42.7
MD10G1128300 Malus domestica HOM05D007970 ORTHO05D009943 8.0e-10 67.4 98 42.9
Gohir.A03G206000 Gossypium hirsutum HOM05D007970 ORTHO05D009943 1.8e-09 66.2 116 34.5
Gorai.005G255300 Gossypium raimondii HOM05D007970 ORTHO05D009943 5.2e-09 64.7 116 34.5
Ciclev10030163m.g Citrus clementina HOM05D007970 ORTHO05D009943 8.8e-09 63.9 86 47.7
Gohir.D02G227400 Gossypium hirsutum HOM05D007970 ORTHO05D009943 1.5e-08 63.2 116 34.5
CANSAT25G3784 Cannabis sativa HOM05D007970 ORTHO05D009943 9.8e-08 60.5 107 39.3
ClCG02G012110 Citrullus lanatus HOM05D007970 ORTHO05D009943 1.7e-07 59.7 82 40.2
TAR268G0003 Trochodendron aralioides HOM05D006872 ORTHO05D006261 1.7e-07 59.7 55 58.2
Nn2g14262 Nelumbo nucifera HOM05D006872 ORTHO05D006261 2.2e-07 59.3 55 56.4
DCAR_022819 Daucus carota HOM05D046813 ORTHO05D009943 2.8e-07 58.9 109 36.7
DCAR_022820 Daucus carota HOM05D046813 ORTHO05D009943 2.8e-07 58.9 109 36.7
Nn6g34756 Nelumbo nucifera HOM05D006872 ORTHO05D006261 2.8e-07 58.9 55 54.5
MBI01_g17601_MAGBIO Magnolia biondii HOM05D006872 ORTHO05D006261 4.8e-07 58.2 83 38.6
TAR633G1261 Trochodendron aralioides HOM05D006872 ORTHO05D006261 1.1e-06 57.0 58 53.4
MELO3C034691.2 Cucumis melo HOM05D007970 ORTHO05D009943 3.1e-06 55.5 81 42.0
Gohir.D01G161700 Gossypium hirsutum HOM05D007970 ORTHO05D009943 7.0e-06 54.3 116 34.5
Gorai.002G200600 Gossypium raimondii HOM05D007970 ORTHO05D009943 7.0e-06 54.3 116 34.5
QL11p052437 Quercus lobata HOM05D007970 ORTHO05D009943 9.1e-06 53.9 117 36.8


User provided reference genes

Program Settings