Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen01g053260 Solanum pennellii HOM05D006293 ORTHO05D007971 7.1e-186 653.7 306 100.0
Solyc01g111210.3 Solanum lycopersicum HOM05D001375 ORTHO05D001222 3.9e-184 647.9 305 98.7
PGSC0003DMG400001627 Solanum tuberosum HOM05D006293 ORTHO05D007971 2.7e-169 598.6 318 89.6
CAN.G588.32 Capsicum annuum HOM05D006293 ORTHO05D007971 3.2e-154 548.5 324 81.2
Peaxi162Scf00362g00956 Petunia axillaris HOM05D001375 ORTHO05D001222 6.1e-153 544.3 315 81.6
Nitab4.5_0000980g0060 Nicotiana tabacum HOM05D001375 ORTHO05D001222 7.0e-133 477.6 317 74.1
Oeu014457.2 Olea europaea HOM05D006293 ORTHO05D007971 2.5e-114 416.0 322 61.2
Dinv04963 Davidia involucrata HOM05D006293 ORTHO05D007971 5.8e-111 404.8 322 60.2
SGA_v2.0_scaffold32G13265 Striga asiatica HOM05D006293 ORTHO05D007971 2.4e-109 399.4 303 62.4
Cc02_g16450 Coffea canephora HOM05D006293 ORTHO05D007971 9.2e-109 397.5 311 60.5
Oeu060421.1 Olea europaea HOM05D006293 ORTHO05D007971 3.5e-108 395.6 324 61.4
Rhsim11G0188600 Rhododendron simsii HOM05D006293 ORTHO05D007971 3.9e-107 392.1 342 55.3
Nn5g29105 Nelumbo nucifera HOM05D006293 ORTHO05D007971 8.6e-107 391.0 310 59.0
TAR376G0811 Trochodendron aralioides HOM05D006293 ORTHO05D007971 1.5e-106 390.2 306 60.1
Cfa005191 Carpinus fangiana HOM05D006293 ORTHO05D007971 2.3e-104 382.9 326 55.8
MSTRG.16884 Avicennia marina HOM05D006293 ORTHO05D007971 5.2e-104 381.7 347 54.8
Haze_02189 Corylus avellana HOM05D006293 ORTHO05D007971 5.2e-104 381.7 326 56.4
CSS0030950 Camellia sinensis var. sinensis HOM05D006293 ORTHO05D007971 2.6e-103 379.4 324 58.3
Glyma.06G004900 Glycine max HOM05D006293 ORTHO05D007971 3.4e-103 379.0 321 55.8
QL11p047722 Quercus lobata HOM05D006293 ORTHO05D007971 5.8e-103 378.3 332 55.1
Migut.B00115 Erythranthe guttata HOM05D006293 ORTHO05D007971 1.9e-101 373.2 321 57.0
Rhsim11G0188500 Rhododendron simsii HOM05D006293 ORTHO05D007971 1.9e-101 373.2 385 48.6
GSVIVG01024071001 Vitis vinifera HOM05D006293 ORTHO05D007971 2.4e-101 372.9 318 58.5
vmacro02255 Vaccinium macrocarpon HOM05D006293 ORTHO05D007971 5.4e-101 371.7 329 53.8
Prupe.8G161400 Prunus persica HOM05D006293 ORTHO05D007971 1.2e-100 370.5 338 53.8
VMungo1309G1166 Vigna mungo HOM05D006293 ORTHO05D007971 1.6e-100 370.2 324 54.9
Potri.004G169200 Populus trichocarpa HOM05D006293 ORTHO05D007971 4.6e-100 368.6 320 56.2
Manes.11G090800 Manihot esculenta HOM05D006293 ORTHO05D007971 1.7e-99 366.7 322 57.1
Glyma.04G005100 Glycine max HOM05D006293 ORTHO05D007971 6.6e-99 364.8 336 53.3
ClCG02G011620 Citrullus lanatus HOM05D006293 ORTHO05D007971 1.5e-98 363.6 313 57.2
Ca_15314_v3 Cicer arietinum L. HOM05D006293 ORTHO05D007971 1.9e-98 363.2 318 54.4
Medtr3g117760 Medicago truncatula HOM05D006293 ORTHO05D007971 1.9e-98 363.2 308 56.8
COL.COLO4_17266 Corchorus olitorius HOM05D006293 ORTHO05D007971 5.6e-98 361.7 326 55.5
Gorai.002G193700 Gossypium raimondii HOM05D006293 ORTHO05D007971 1.4e-96 357.1 308 56.5
Gohir.A01G164300 Gossypium hirsutum HOM05D006293 ORTHO05D007971 3.1e-96 355.9 309 56.6
Gohir.D01G156200 Gossypium hirsutum HOM05D006293 ORTHO05D007971 4.0e-96 355.5 308 56.2
Thecc.02G066200 Theobroma cacao HOM05D006293 ORTHO05D007971 4.0e-96 355.5 324 54.6
Phvul.009G025500 Phaseolus vulgaris HOM05D006293 ORTHO05D007971 6.8e-96 354.8 319 53.6
CiPaw.05G077900 Carya illinoinensis HOM05D006293 ORTHO05D007971 9.9e-95 350.9 294 58.2
Ciclev10028711m.g Citrus clementina HOM05D006293 ORTHO05D007971 1.3e-94 350.5 363 48.2
Nn1g05912 Nelumbo nucifera HOM05D006293 ORTHO05D007971 1.3e-94 350.5 295 55.6
FAN15G0431 Fragaria x ananassa HOM05D006293 ORTHO05D007971 2.9e-94 349.4 326 53.1
Lj5C183T16 Lonicera japonica HOM05D006293 ORTHO05D007971 4.9e-94 348.6 335 53.4
TAR628G0693 Trochodendron aralioides HOM05D006293 ORTHO05D007971 8.4e-94 347.8 317 55.2
TPR.G38570 Trifolium pratense HOM05D006293 ORTHO05D007971 1.4e-93 347.1 320 53.4
Lj1g0023631 Lotus japonicus HOM05D006293 ORTHO05D007971 1.9e-93 346.7 317 53.0
Lsat_1_v5_gn_8_126000 Lactuca sativa HOM05D006293 ORTHO05D007971 2.4e-93 346.3 308 57.8
RcHm_v2.0_Chr6g0244771 Rosa chinensis HOM05D006293 ORTHO05D007971 3.2e-93 345.9 335 51.9
Duzib132G0283 Durio zibethinus HOM05D006293 ORTHO05D007971 9.2e-93 344.4 312 54.5
Cpa.g.sc37.182 Carica papaya HOM05D006293 ORTHO05D007971 1.2e-92 344.0 318 53.5
Eucgr.G01761 Eucalyptus grandis HOM05D006293 ORTHO05D007971 1.2e-92 344.0 327 52.0
Lalb_Chr23g0265081 Lupinus albus HOM05D006293 ORTHO05D007971 1.2e-92 344.0 322 52.8
MD05G1116900 Malus domestica HOM05D006293 ORTHO05D007971 1.6e-92 343.6 347 48.7
FAN24G1019 Fragaria x ananassa HOM05D006293 ORTHO05D007971 1.0e-91 340.9 352 49.7
Dinv41970 Davidia involucrata HOM05D006293 ORTHO05D007971 1.7e-91 340.1 251 62.9
FAN20G1949 Fragaria x ananassa HOM05D006293 ORTHO05D007971 1.7e-91 340.1 349 49.0
FAN27G2989 Fragaria x ananassa HOM05D006293 ORTHO05D007971 6.6e-91 338.2 342 50.6
TWI31G0553 Tripterygium wilfordii HOM05D006293 ORTHO05D007971 6.6e-91 338.2 329 50.8
MELO3C020791.2 Cucumis melo HOM05D006293 ORTHO05D007971 3.3e-90 335.9 310 52.6
FvH4_2g01740 Fragaria vesca HOM05D006293 ORTHO05D007971 3.3e-90 335.9 349 49.0
CANSAT25G1913 Cannabis sativa HOM05D006293 ORTHO05D007971 5.6e-90 335.1 345 48.1
THA.LOC104804336 Tarenaya hassleriana HOM05D006293 ORTHO05D007971 7.3e-90 334.7 315 52.4
TAR536G0014 Trochodendron aralioides HOM05D006293 ORTHO05D007971 9.6e-90 334.3 306 53.6
HanXRQChr17g0557851 Helianthus annuus HOM05D006293 ORTHO05D007971 1.2e-89 334.0 320 53.8
EL10Ac9g21428 Beta vulgaris HOM05D006293 ORTHO05D007971 1.2e-87 327.4 350 48.6
Psat5g003040 Pisum sativum HOM05D006293 ORTHO05D007971 2.0e-87 326.6 336 49.4
DCAR_003705 Daucus carota HOM05D006293 ORTHO05D007971 3.4e-87 325.9 315 52.1
Sed0004865 Sechium edule HOM05D006293 ORTHO05D007971 4.9e-86 322.0 310 51.0
AUR62010081 Chenopodium quinoa HOM05D006293 ORTHO05D007971 1.4e-85 320.5 322 50.0
AUR62013075 Chenopodium quinoa HOM05D006293 ORTHO05D007971 1.2e-84 317.4 322 49.7
ATR0810G191 Amborella trichopoda HOM05D006293 ORTHO05D007971 1.6e-84 317.0 294 52.4
Sc14g0002130 Simmondsia chinensis HOM05D006293 ORTHO05D007971 2.7e-84 316.2 315 50.5
Hund06410 Selenicereus undatus HOM05D006293 ORTHO05D007971 4.6e-84 315.5 325 49.8
ECA233G0605 Erigeron canadensis HOM05D001375 ORTHO05D001222 3.9e-83 312.4 314 51.9
Ah.01g022670 Amaranthus hybridus HOM05D006293 ORTHO05D007971 1.3e-81 307.4 313 50.5
BcaC04g23011 Brassica carinata HOM05D006293 ORTHO05D007971 4.8e-81 305.4 339 46.3
BolC9t54199H Brassica oleracea HOM05D006293 ORTHO05D007971 4.8e-81 305.4 339 46.3
CARHR106850 Cardamine hirsuta HOM05D006293 ORTHO05D007971 4.8e-81 305.4 337 48.4
C09p13060 Brassica napus HOM05D006293 ORTHO05D007971 8.1e-81 304.7 339 46.0
MBI05_g07501_MAGBIO Magnolia biondii HOM05D006293 ORTHO05D007971 1.3e-78 297.4 298 48.3
MBI05_g47219_MAGBIO Magnolia biondii HOM05D006293 ORTHO05D007971 6.4e-78 295.0 298 48.3
BraA09t36749Z Brassica rapa HOM05D006293 ORTHO05D007971 1.9e-77 293.5 347 44.7
BcaC06g36161 Brassica carinata HOM05D006293 ORTHO05D007971 3.2e-77 292.7 343 44.9
A07p04460 Brassica napus HOM05D006293 ORTHO05D007971 3.2e-77 292.7 343 45.2
C07p07090 Brassica napus HOM05D006293 ORTHO05D007971 3.2e-77 292.7 343 44.9
BolC7t41128H Brassica oleracea HOM05D006293 ORTHO05D007971 3.2e-77 292.7 343 44.9
BraA07t28238Z Brassica rapa HOM05D006293 ORTHO05D007971 4.2e-77 292.4 343 45.2
A09p11050 Brassica napus HOM05D006293 ORTHO05D007971 9.3e-77 291.2 345 44.9
MBI05_g30117_MAGBIO Magnolia biondii HOM05D006293 ORTHO05D007971 1.0e-75 287.7 298 46.6
PSO700G0292 Papaver somniferum HOM05D006293 ORTHO05D007971 1.0e-75 287.7 311 49.2
PSO170G2363 Papaver somniferum HOM05D006293 ORTHO05D007971 1.3e-75 287.3 346 45.1
Carub.0003s3038 Capsella rubella HOM05D006293 ORTHO05D007971 5.1e-75 285.4 341 44.3
Ah.01g009070 Amaranthus hybridus HOM05D006293 ORTHO05D007971 6.7e-75 285.0 310 48.4
Nitab4.5_0000283g0050 Nicotiana tabacum HOM05D001375 ORTHO05D001222 8.7e-75 284.6 308 50.0
AL3G49260 Arabidopsis lyrata HOM05D006293 ORTHO05D007971 1.5e-74 283.9 324 45.4
Sp3g30120 Schrenkiella parvula HOM05D006293 ORTHO05D007971 1.5e-74 283.9 379 41.2
AT2G16630 Arabidopsis thaliana HOM05D006293 ORTHO05D007971 5.6e-74 282.0 359 42.1
BcaB07g31757 Brassica carinata HOM05D006293 ORTHO05D007971 7.4e-74 281.6 345 44.1
Thhalv10022734m.g Eutrema salsugineum HOM05D006293 ORTHO05D007971 7.4e-74 281.6 383 40.5
MBI05_g48109_MAGBIO Magnolia biondii HOM05D006293 ORTHO05D007971 1.6e-73 280.4 298 47.7
HanXRQChr10g0298941 Helianthus annuus HOM05D006293 ORTHO05D007971 1.1e-72 277.7 335 45.7
CsaV3_2G015780 Cucumis sativus L. HOM05D006293 ORTHO05D007971 1.4e-72 277.3 329 45.0
Aa31LG8G13900 Aethionema arabicum HOM05D006293 ORTHO05D007971 6.9e-72 275.0 316 44.6
Aqoxy5G00988 Aquilegia oxysepala HOM05D006293 ORTHO05D007971 5.8e-71 271.9 289 49.8
CDE05G1002 Ceratophyllum demersum HOM05D006293 ORTHO05D007971 1.3e-65 254.2 296 45.6
unitig_0.g827 Utricularia gibba HOM05D006293 ORTHO05D007971 6.2e-65 251.9 327 43.4
unitig_0.g43 Utricularia gibba HOM05D006293 ORTHO05D007971 1.5e-63 247.3 296 46.6
HPP92_013009 Vanilla planifolia HOM05D006293 ORTHO05D007971 7.6e-63 245.0 290 43.1
SEGI_19356 Sequoiadendron giganteum HOM05D006293 ORTHO05D007971 4.6e-60 235.7 327 40.4
Aqoxy1G01171 Aquilegia oxysepala HOM05D006293 ORTHO05D007971 3.0e-59 233.0 258 47.3
PGR042G0330 Punica granatum HOM05D006293 ORTHO05D007971 6.9e-56 221.9 391 34.8
MSTRG.20014 Avicennia marina HOM05D006293 ORTHO05D007971 1.0e-54 218.0 199 55.3
MD10G1120100 Malus domestica HOM05D006293 ORTHO05D007971 1.1e-48 198.0 128 62.5
BcaB03g16385 Brassica carinata HOM05D006293 ORTHO05D007971 1.4e-48 197.6 354 34.2
MBI05_g21530_MAGBIO Magnolia biondii HOM05D006293 ORTHO05D007971 1.6e-44 184.1 209 44.5
SEGI_14996 Sequoiadendron giganteum HOM05D006293 ORTHO05D007971 2.1e-44 183.7 321 36.4
Gohir.1Z049391 Gossypium hirsutum HOM05D006293 ORTHO05D007971 5.3e-40 169.1 143 55.2
MD10G1120000 Malus domestica HOM05D006293 ORTHO05D007971 2.2e-38 163.7 129 58.1
Pp3c1_27500 Physcomitrium patens HOM05D006293 ORTHO05D007971 3.1e-32 143.3 281 32.7
Mapoly0014s0128 Marchantia polymorpha HOM05D006293 ORTHO05D007971 5.3e-32 142.5 292 31.5
ECA234G1535 Erigeron canadensis HOM05D001991 ORTHO05D007971 7.0e-32 142.1 164 43.3
Pp3c14_8250 Physcomitrium patens HOM05D006293 ORTHO05D007971 7.7e-31 138.7 282 33.0
Aqoxy6G00177 Aquilegia oxysepala HOM05D006293 ORTHO05D007971 1.0e-30 138.3 298 32.2
Zm00001eb210030 Zea mays HOM05D006293 ORTHO05D007971 1.2e-23 114.8 124 43.5
SMO223G0025 Selaginella moellendorffii HOM05D006293 ORTHO05D007971 2.0e-23 114.0 304 28.9
MBI05_g31848_MAGBIO Magnolia biondii HOM05D006293 ORTHO05D007971 6.1e-20 102.4 108 42.6
Actinidia00600 Actinidia chinensis HOM05D006293 ORTHO05D007971 1.2e-15 88.2 63 63.5
SEGI_23181 Sequoiadendron giganteum HOM05D006293 ORTHO05D007971 1.6e-15 87.8 216 31.0
SGA_v2.0_scaffold9G04828 Striga asiatica HOM05D006293 ORTHO05D007971 2.8e-12 77.0 56 57.1
SMO367G0707 Selaginella moellendorffii HOM05D007363 ORTHO05D009018 6.3e-09 65.9 91 41.8
Mapoly0022s0141 Marchantia polymorpha HOM05D021038 ORTHO05D009018 4.6e-07 59.7 111 33.3
AagrBONN_evm.TU.Sc2ySwM_368.1639 Anthoceros agrestis HOM05D006293 ORTHO05D009176 8.6e-06 55.5 158 29.1


User provided reference genes

Program Settings