Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen01g052500 Solanum pennellii HOM05D000120 ORTHO05D009410 6.8e-131 470.7 244 100.0
Solyc01g110350.2 Solanum lycopersicum HOM05D000120 ORTHO05D009410 4.3e-125 451.4 238 97.5
PGSC0003DMG400046163 Solanum tuberosum HOM05D000120 ORTHO05D009410 4.6e-119 431.4 244 91.8
Nitab4.5_0017990g0010 Nicotiana tabacum HOM05D000120 ORTHO05D009410 2.4e-83 312.8 245 70.6
CAN.G170.96 Capsicum annuum HOM05D000120 ORTHO05D009410 1.0e-81 307.4 244 69.3
Peaxi162Scf00016g10015 Petunia axillaris HOM05D000120 ORTHO05D009410 5.1e-70 268.5 237 62.9
Dinv23458 Davidia involucrata HOM05D000120 ORTHO05D009410 2.3e-41 173.3 240 46.7
Oeu055633.1 Olea europaea HOM05D000120 ORTHO05D009410 7.0e-35 151.8 236 42.8
Sabra09G0095200 Salix brachista HOM05D000120 ORTHO05D009410 4.9e-28 129.0 253 36.8
Cc02_g16960 Coffea canephora HOM05D000120 ORTHO05D009410 8.3e-28 128.3 225 40.9
TWI79G0897 Tripterygium wilfordii HOM05D000120 ORTHO05D009410 1.6e-26 124.0 232 39.7
Potri.009G124000 Populus trichocarpa HOM05D000120 ORTHO05D009410 1.0e-25 121.3 246 37.0
TWI31G0702 Tripterygium wilfordii HOM05D000120 ORTHO05D009410 3.0e-25 119.8 230 37.4
MSTRG.5421 Avicennia marina HOM05D000120 ORTHO05D009410 5.0e-25 119.0 211 35.5
COL.COLO4_26040 Corchorus olitorius HOM05D000120 ORTHO05D009410 1.1e-24 117.9 248 36.3
GSVIVG01024178001 Vitis vinifera HOM05D000120 ORTHO05D009410 1.9e-24 117.1 241 39.0
Duzib248G0587 Durio zibethinus HOM05D000120 ORTHO05D009410 7.3e-24 115.2 251 36.7
Actinidia02243 Actinidia chinensis HOM05D000120 ORTHO05D009410 9.5e-24 114.8 209 40.2
Haze_02260 Corylus avellana HOM05D000120 ORTHO05D009410 1.6e-23 114.0 240 37.9
Thecc.02G075700 Theobroma cacao HOM05D000120 ORTHO05D009410 3.6e-23 112.8 255 36.5
MD10G1063700 Malus domestica HOM05D000120 ORTHO05D009410 6.2e-23 112.1 246 34.1
AUR62010396 Chenopodium quinoa HOM05D000120 ORTHO05D009410 2.3e-22 110.2 245 35.1
Cfa005100 Carpinus fangiana HOM05D000722 ORTHO05D000590 8.9e-22 108.2 240 37.1
vmacro02052 Vaccinium macrocarpon HOM05D000120 ORTHO05D009410 8.9e-22 108.2 246 35.4
Duzib132G0615 Durio zibethinus HOM05D000120 ORTHO05D009410 2.0e-21 107.1 248 35.9
AUR62016822 Chenopodium quinoa HOM05D000120 ORTHO05D009410 2.6e-21 106.7 254 35.0
MD00G1040100 Malus domestica HOM05D000120 ORTHO05D009410 4.4e-21 105.9 247 34.4
DCAR_022914 Daucus carota HOM05D000120 ORTHO05D009410 7.5e-21 105.1 258 32.6
PGR042G1442 Punica granatum HOM05D000120 ORTHO05D009410 7.5e-21 105.1 242 36.0
Ciclev10029808m.g Citrus clementina HOM05D000120 ORTHO05D009410 1.3e-20 104.4 256 33.2
Eucgr.G01727 Eucalyptus grandis HOM05D000120 ORTHO05D009410 4.9e-20 102.4 241 35.3
Manes.11G082300 Manihot esculenta HOM05D000120 ORTHO05D009410 6.4e-20 102.1 248 33.5
Hund00217 Selenicereus undatus HOM05D000120 ORTHO05D000105 8.3e-20 101.7 250 33.2
Prupe.8G085200 Prunus persica HOM05D000120 ORTHO05D009410 1.4e-19 100.9 236 34.3
Atru.chr5.3139 Acer truncatum HOM05D000120 ORTHO05D009410 1.9e-19 100.5 198 37.9
SalBow6G2916 Salvia bowleyana HOM05D000120 ORTHO05D009410 2.4e-19 100.1 277 29.6
Hma1.2p1_1244F.1_g270010 Hydrangea macrophylla HOM05D000120 ORTHO05D009410 3.2e-19 99.8 255 34.1
Sc08g0000840 Simmondsia chinensis HOM05D000120 ORTHO05D009410 3.2e-19 99.8 240 31.2
SGA_v2.0_scaffold32G13221 Striga asiatica HOM05D000120 ORTHO05D009410 9.2e-19 98.2 220 34.5
FvH4_2g10380 Fragaria vesca HOM05D000120 ORTHO05D009410 2.7e-18 96.7 250 34.8
FAN20G2164 Fragaria x ananassa HOM05D000120 ORTHO05D009410 2.7e-18 96.7 250 34.4
arahy.Tifrunner.gnm1.ann1.X3J0BR Arachis hypogaea HOM05D000120 ORTHO05D009410 4.6e-18 95.9 238 29.4
RcHm_v2.0_Chr6g0267851 Rosa chinensis HOM05D000120 ORTHO05D009410 4.6e-18 95.9 241 34.0
Lj3g0001494 Lotus japonicus HOM05D000120 ORTHO05D009410 6.0e-18 95.5 244 31.1
Potri.004G162300 Populus trichocarpa HOM05D000120 ORTHO05D009410 1.0e-17 94.7 237 34.6
FAN24G2037 Fragaria x ananassa HOM05D000120 ORTHO05D009410 1.3e-17 94.4 250 34.4
CANSAT11G1664 Cannabis sativa HOM05D000120 ORTHO05D009410 5.1e-17 92.4 246 29.3
Manes.04G083900 Manihot esculenta HOM05D000120 ORTHO05D009410 6.6e-17 92.0 252 32.1
CiPaw.06G128400 Carya illinoinensis HOM05D000120 ORTHO05D009410 1.5e-16 90.9 223 33.6
Ca_27169_v3 Cicer arietinum L. HOM05D000120 ORTHO05D009410 1.9e-16 90.5 228 32.0
unitig_747.g21207 Utricularia gibba HOM05D000120 ORTHO05D009410 1.9e-16 90.5 229 35.4
VMungo1127G0720 Vigna mungo HOM05D000120 ORTHO05D009410 4.3e-16 89.4 244 30.3
Migut.B00178 Erythranthe guttata HOM05D000120 ORTHO05D009410 5.6e-16 89.0 217 35.9
Lalb_Chr03g0030591 Lupinus albus HOM05D000120 ORTHO05D009410 7.3e-16 88.6 239 32.2
ClCG02G004590 Citrullus lanatus HOM05D000120 ORTHO05D009410 9.5e-16 88.2 240 31.7
MELO3C002789.2 Cucumis melo HOM05D000120 ORTHO05D009410 9.5e-16 88.2 237 30.8
CsaV3_7G000360 Cucumis sativus L. HOM05D000120 ORTHO05D009410 9.5e-16 88.2 237 30.4
Phvul.011G156600 Phaseolus vulgaris HOM05D000120 ORTHO05D009410 9.5e-16 88.2 243 30.0
Nn7g36692 Nelumbo nucifera HOM05D000120 ORTHO05D009410 2.8e-15 86.7 210 35.2
TAR376G0786 Trochodendron aralioides HOM05D000120 ORTHO05D009410 2.8e-15 86.7 247 32.8
Lsat_1_v5_gn_3_44160 Lactuca sativa HOM05D000120 ORTHO05D009410 1.4e-14 84.3 241 32.0
FAN27G2529 Fragaria x ananassa HOM05D000120 ORTHO05D009410 1.8e-14 84.0 206 35.0
Sed0016080 Sechium edule HOM05D000120 ORTHO05D009410 4.0e-14 82.8 268 29.1
TAR628G1238 Trochodendron aralioides HOM05D000120 ORTHO05D009410 5.2e-14 82.4 250 31.6
ECA240G4650 Erigeron canadensis HOM05D000120 ORTHO05D009410 8.9e-14 81.6 229 32.3
Glyma.06G246300 Glycine max HOM05D000120 ORTHO05D009410 8.9e-14 81.6 275 28.0
Gohir.A12G041200 Gossypium hirsutum HOM05D000120 ORTHO05D009410 8.9e-14 81.6 209 31.1
HanXRQChr15g0478301 Helianthus annuus HOM05D000120 ORTHO05D009410 8.9e-14 81.6 199 33.7
PSO210G7327 Papaver somniferum HOM05D000120 ORTHO05D009410 1.5e-13 80.9 222 32.0
Gohir.D12G031200 Gossypium hirsutum HOM05D000120 ORTHO05D009410 2.0e-13 80.5 209 30.6
Gorai.008G031900 Gossypium raimondii HOM05D000120 ORTHO05D009410 2.0e-13 80.5 209 30.6
Sed0018675 Sechium edule HOM05D000120 ORTHO05D009410 4.4e-13 79.3 270 28.1
Duzib052G0028 Durio zibethinus HOM05D000120 ORTHO05D009410 7.5e-13 78.6 248 31.0
Aqoxy5G01485 Aquilegia oxysepala HOM05D000120 ORTHO05D009410 2.2e-12 77.0 250 29.2
TPR.G31517 Trifolium pratense HOM05D000120 ORTHO05D009410 2.2e-12 77.0 260 29.2
Cpa.g.sc150.20 Carica papaya HOM05D000120 ORTHO05D009410 1.1e-11 74.7 245 30.2
QL11p046369 Quercus lobata HOM05D000120 ORTHO05D009410 1.9e-11 73.9 372 25.8
AT4G38980 Arabidopsis thaliana HOM05D011065 ORTHO05D009410 1.3e-09 67.8 269 28.3
Thhalv10027283m.g Eutrema salsugineum HOM05D011065 ORTHO05D009410 1.5e-08 64.3 252 27.4
Sp7g36860 Schrenkiella parvula HOM05D011065 ORTHO05D009410 3.3e-08 63.2 265 29.4
Os02g0469000 Oryza sativa ssp. japonica HOM05D000120 ORTHO05D009410 7.3e-08 62.0 235 28.1
Carub.0007s0080 Capsella rubella HOM05D011065 ORTHO05D009410 3.6e-07 59.7 273 25.6
Aa31LG6G16270 Aethionema arabicum HOM05D011065 ORTHO05D009410 6.2e-07 58.9 238 26.5
BraA08t34348Z Brassica rapa HOM05D011065 ORTHO05D009410 8.1e-07 58.5 259 27.0
Zm00001eb180650 Zea mays HOM05D000120 ORTHO05D009410 8.1e-07 58.5 239 26.4
AL7G10880 Arabidopsis lyrata HOM05D011065 ORTHO05D009410 2.4e-06 57.0 93 39.8
A08p23900 Brassica napus HOM05D011065 ORTHO05D009410 3.1e-06 56.6 264 25.8
CDE02G1861 Ceratophyllum demersum HOM05D055785 ORTHO05D043884 3.1e-06 56.6 103 35.0
CARHR247790 Cardamine hirsuta HOM05D011065 ORTHO05D009410 5.2e-06 55.8 137 34.3


User provided reference genes

Program Settings