Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen01g051190 Solanum pennellii HOM05D008110 ORTHO05D000088 5.2e-92 341.3 203 100.0
Solyc01g108950.3 Solanum lycopersicum HOM05D008110 ORTHO05D000088 3.4e-27 125.9 98 69.4
Sopen01g051160 Solanum pennellii HOM05D008110 ORTHO05D000088 5.9e-27 125.2 98 69.4
PGSC0003DMG400025830 Solanum tuberosum HOM05D008110 ORTHO05D000088 2.1e-24 116.7 95 66.3
Solyc01g108940.2 Solanum lycopersicum HOM05D008110 ORTHO05D000088 1.0e-18 97.8 94 57.4
Sopen01g051140 Solanum pennellii HOM05D008110 ORTHO05D000088 1.6e-16 90.5 90 55.6
Solyc09g090290.3 Solanum lycopersicum HOM05D008307 ORTHO05D010374 1.5e-14 84.0 58 72.4
Sopen09g033190 Solanum pennellii HOM05D008307 ORTHO05D010374 7.4e-14 81.6 57 71.9
PGSC0003DMG400017215 Solanum tuberosum HOM05D008307 ORTHO05D010374 1.3e-13 80.9 57 70.2
CAN.G192.15 Capsicum annuum HOM05D008110 ORTHO05D000088 2.2e-13 80.1 107 45.8
Sopen02g006830 Solanum pennellii HOM05D008110 ORTHO05D000088 2.8e-13 79.7 59 61.0
Sopen02g009350 Solanum pennellii HOM05D008110 ORTHO05D000088 2.8e-13 79.7 97 45.4
PGSC0003DMG401025831 Solanum tuberosum HOM05D008110 ORTHO05D000088 2.8e-13 79.7 98 44.9
Solyc01g106250.4 Solanum lycopersicum HOM05D008110 ORTHO05D000088 3.7e-13 79.3 96 44.8
PGSC0003DMG402025831 Solanum tuberosum HOM05D004388 ORTHO05D005106 3.7e-13 79.3 60 63.3
Nitab4.5_0001401g0140 Nicotiana tabacum HOM05D008110 ORTHO05D000088 1.1e-12 77.8 61 59.0
Nitab4.5_0008194g0010 Nicotiana tabacum HOM05D008110 ORTHO05D000088 1.1e-12 77.8 61 59.0
Solyc01g109030.4 Solanum lycopersicum HOM05D008110 ORTHO05D000088 1.4e-12 77.4 60 61.7
Solyc02g026080.2 Solanum lycopersicum HOM05D008110 ORTHO05D000088 1.8e-12 77.0 59 59.3
PGSC0003DMG400010668 Solanum tuberosum HOM05D008110 ORTHO05D000088 1.8e-12 77.0 59 61.0
Sopen01g048640 Solanum pennellii HOM05D008110 ORTHO05D000088 2.4e-12 76.6 59 59.3
CAN.G555.3 Capsicum annuum HOM05D008110 ORTHO05D000088 3.1e-12 76.3 59 62.7
PGSC0003DMG400044725 Solanum tuberosum HOM05D008110 ORTHO05D000088 6.9e-12 75.1 59 57.6
CAN.G241.1 Capsicum annuum HOM05D008110 ORTHO05D000088 9.1e-12 74.7 82 43.9
CAN.G322.59 Capsicum annuum HOM05D008110 ORTHO05D000088 1.2e-11 74.3 55 61.8
CAN.G322.83 Capsicum annuum HOM05D008110 ORTHO05D000088 2.2e-10 70.1 95 41.1
CAN.G504.44 Capsicum annuum HOM05D000185 ORTHO05D000105 2.9e-10 69.7 54 61.1
Dinv42109 Davidia involucrata HOM05D008110 ORTHO05D000088 1.1e-09 67.8 59 50.8
Peaxi162Scf00016g01351 Petunia axillaris HOM05D008110 ORTHO05D000088 1.4e-09 67.4 68 45.6
PGSC0003DMG400002182 Solanum tuberosum HOM05D003159 ORTHO05D003780 1.9e-09 67.0 48 66.7
Actinidia12967 Actinidia chinensis HOM05D008110 ORTHO05D000088 2.5e-09 66.6 78 44.9
PGSC0003DMG400035405 Solanum tuberosum HOM05D008110 ORTHO05D000088 2.5e-09 66.6 63 52.4
CSS0024769 Camellia sinensis var. sinensis HOM05D008110 ORTHO05D000088 4.2e-09 65.9 94 38.3
Hma1.2p1_1527F.1_g289060 Hydrangea macrophylla HOM05D008110 ORTHO05D000088 7.2e-09 65.1 61 47.5
RhsimUnG0089900 Rhododendron simsii HOM05D008110 ORTHO05D000088 9.4e-09 64.7 59 47.5
PGSC0003DMG400045703 Solanum tuberosum HOM05D008110 ORTHO05D000088 1.2e-08 64.3 42 61.9
PGSC0003DMG400044605 Solanum tuberosum HOM05D008110 ORTHO05D000088 1.6e-08 63.9 63 50.8
PGSC0003DMG400036386 Solanum tuberosum HOM05D008110 ORTHO05D000088 4.7e-08 62.4 68 45.6
Cc00_g00220 Coffea canephora HOM05D008110 ORTHO05D000088 6.1e-08 62.0 58 43.1
Sopen06g015150 Solanum pennellii HOM05D008110 ORTHO05D000088 1.8e-07 60.5 89 47.2
CAN.G220.11 Capsicum annuum HOM05D008307 ORTHO05D010374 2.3e-07 60.1 64 57.8
CAN.G192.14 Capsicum annuum HOM05D008110 ORTHO05D000088 3.9e-07 59.3 55 58.2
GSVIVG01031853001 Vitis vinifera HOM05D008110 ORTHO05D005106 6.7e-07 58.5 59 45.8
DCAR_022075 Daucus carota HOM05D008110 ORTHO05D000088 3.3e-06 56.2 91 36.3
Migut.N02603 Erythranthe guttata HOM05D008110 ORTHO05D000088 4.4e-06 55.8 70 37.1
Sopen05g025010 Solanum pennellii HOM05D008110 ORTHO05D000088 5.7e-06 55.5 49 57.1
Cc00_g00230 Coffea canephora HOM05D008110 ORTHO05D000088 9.7e-06 54.7 58 44.8


User provided reference genes

Program Settings