Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen01g051180 Solanum pennellii HOM05D001803 ORTHO05D001686 5.2e-40 167.2 78 100.0
Solyc01g108970.4 Solanum lycopersicum HOM05D001803 ORTHO05D001686 4.8e-38 160.6 77 96.1
Oeu034075.1 Olea europaea HOM05D001803 ORTHO05D001686 4.7e-25 117.5 69 81.2
Cc02_g18290 Coffea canephora HOM05D001803 ORTHO05D001686 1.0e-24 116.3 67 83.6
TAR381G0847 Trochodendron aralioides HOM05D001803 ORTHO05D001686 1.4e-24 115.9 73 76.7
Actinidia27931 Actinidia chinensis HOM05D001803 ORTHO05D001686 1.8e-24 115.5 67 82.1
CSS0007884 Camellia sinensis var. sinensis HOM05D001803 ORTHO05D001686 3.0e-24 114.8 67 82.1
GSVIVG01031845001 Vitis vinifera HOM05D001803 ORTHO05D001686 3.0e-24 114.8 67 82.1
Haze_02472 Corylus avellana HOM05D001803 ORTHO05D001686 4.0e-24 114.4 67 82.1
MD05G1073000 Malus domestica HOM05D001803 ORTHO05D001686 4.0e-24 114.4 67 82.1
MD10G1087600 Malus domestica HOM05D001803 ORTHO05D001686 4.0e-24 114.4 67 82.1
Peaxi162Scf00016g01356 Petunia axillaris HOM05D001803 ORTHO05D001686 4.0e-24 114.4 67 82.1
QL11p039077 Quercus lobata HOM05D001803 ORTHO05D001686 4.0e-24 114.4 67 82.1
Rhsim05G0079300 Rhododendron simsii HOM05D001803 ORTHO05D001686 4.0e-24 114.4 67 82.1
TWI31G0999 Tripterygium wilfordii HOM05D001803 ORTHO05D001686 4.0e-24 114.4 67 82.1
MSTRG.20126 Avicennia marina HOM05D001803 ORTHO05D001686 5.2e-24 114.0 67 80.6
Migut.N01210 Erythranthe guttata HOM05D001803 ORTHO05D001686 5.2e-24 114.0 67 80.6
vmacro19472 Vaccinium macrocarpon HOM05D001803 ORTHO05D001686 5.2e-24 114.0 67 82.1
Gohir.A13G037100 Gossypium hirsutum HOM05D001803 ORTHO05D001686 6.8e-24 113.6 67 80.6
Gohir.D13G035400 Gossypium hirsutum HOM05D001803 ORTHO05D001686 6.8e-24 113.6 67 80.6
Gorai.013G040200 Gossypium raimondii HOM05D001803 ORTHO05D001686 6.8e-24 113.6 67 80.6
Hma1.2p1_0584F.1_g183210 Hydrangea macrophylla HOM05D001803 ORTHO05D001686 6.8e-24 113.6 67 80.6
Lj2g0024218 Lotus japonicus HOM05D001803 ORTHO05D001686 6.8e-24 113.6 67 80.6
Cfa004938 Carpinus fangiana HOM05D001803 ORTHO05D001686 8.8e-24 113.2 67 80.6
Potri.009G108300 Populus trichocarpa HOM05D001803 ORTHO05D001686 8.8e-24 113.2 67 80.6
Sabra09G0082600 Salix brachista HOM05D001803 ORTHO05D001686 8.8e-24 113.2 67 80.6
Solyc01g108920.4 Solanum lycopersicum HOM05D001803 ORTHO05D001686 8.8e-24 113.2 67 80.6
Sopen01g051120 Solanum pennellii HOM05D001803 ORTHO05D001686 8.8e-24 113.2 67 80.6
CAN.G322.76 Capsicum annuum HOM05D001803 ORTHO05D001686 1.2e-23 112.8 67 80.6
ClCG02G005570 Citrullus lanatus HOM05D001803 ORTHO05D001686 1.2e-23 112.8 67 80.6
MELO3C018420.2 Cucumis melo HOM05D001803 ORTHO05D001686 1.2e-23 112.8 67 80.6
CsaV3_7G010080 Cucumis sativus L. HOM05D001803 ORTHO05D001686 1.2e-23 112.8 67 80.6
Prupe.8G113600 Prunus persica HOM05D001803 ORTHO05D001686 1.2e-23 112.8 67 80.6
Rhsim11G0170100 Rhododendron simsii HOM05D001803 ORTHO05D001686 1.2e-23 112.8 67 80.6
SGA_v2.0_scaffold58G20598 Striga asiatica HOM05D001803 ORTHO05D001686 1.2e-23 112.8 67 80.6
CSS0010635 Camellia sinensis var. sinensis HOM05D001803 ORTHO05D001686 1.5e-23 112.5 67 80.6
Ca_12468_v3 Cicer arietinum L. HOM05D001803 ORTHO05D001686 1.5e-23 112.5 67 80.6
Ca_12475_v3 Cicer arietinum L. HOM05D001803 ORTHO05D001686 1.5e-23 112.5 67 80.6
Dinv23603 Davidia involucrata HOM05D001803 ORTHO05D001686 1.5e-23 112.5 67 80.6
Migut.B00296 Erythranthe guttata HOM05D001803 ORTHO05D001686 1.5e-23 112.5 67 80.6
Manes.17G096000 Manihot esculenta HOM05D001803 ORTHO05D001686 1.5e-23 112.5 67 80.6
Nitab4.5_0008194g0020 Nicotiana tabacum HOM05D001803 ORTHO05D001686 1.5e-23 112.5 67 80.6
Sabra04G0096900 Salix brachista HOM05D001803 ORTHO05D001686 1.5e-23 112.5 67 79.1
CSS0007865 Camellia sinensis var. sinensis HOM05D001803 ORTHO05D001686 2.0e-23 112.1 67 80.6
CiPaw.05G057900 Carya illinoinensis HOM05D001803 ORTHO05D001686 2.0e-23 112.1 67 79.1
CiPaw.06G139800 Carya illinoinensis HOM05D001803 ORTHO05D001686 2.0e-23 112.1 67 80.6
DCAR_001614 Daucus carota HOM05D001803 ORTHO05D001686 2.0e-23 112.1 67 80.6
Sc08g0000230 Simmondsia chinensis HOM05D001803 ORTHO05D001686 2.0e-23 112.1 67 80.6
FvH4_2g07180 Fragaria vesca HOM05D001803 ORTHO05D001686 2.6e-23 111.7 67 79.1
FAN15G3166 Fragaria x ananassa HOM05D001803 ORTHO05D001686 2.6e-23 111.7 67 79.1
FAN20G2247 Fragaria x ananassa HOM05D001803 ORTHO05D001686 2.6e-23 111.7 67 79.1
FAN24G0792 Fragaria x ananassa HOM05D001803 ORTHO05D001686 2.6e-23 111.7 67 79.1
FAN27G2634 Fragaria x ananassa HOM05D001803 ORTHO05D001686 2.6e-23 111.7 67 79.1
Glyma.07G208600 Glycine max HOM05D001803 ORTHO05D001686 2.6e-23 111.7 66 80.3
Manes.15G144800 Manihot esculenta HOM05D001803 ORTHO05D001686 2.6e-23 111.7 67 80.6
RcHm_v2.0_Chr6g0259621 Rosa chinensis HOM05D001803 ORTHO05D001686 2.6e-23 111.7 67 79.1
VMungo0251G1155 Vigna mungo HOM05D001803 ORTHO05D001686 2.6e-23 111.7 66 80.3
MSTRG.5377 Avicennia marina HOM05D001803 ORTHO05D001686 3.4e-23 111.3 67 79.1
CANSAT25G2950 Cannabis sativa HOM05D001803 ORTHO05D001686 3.4e-23 111.3 67 80.6
DCAR_003624 Daucus carota HOM05D001803 ORTHO05D001686 3.4e-23 111.3 67 80.6
ECA234G0369 Erigeron canadensis HOM05D001803 ORTHO05D001686 3.4e-23 111.3 67 80.6
Lj5C205T22 Lonicera japonica HOM05D001803 ORTHO05D001686 3.4e-23 111.3 67 80.6
Lalb_Chr04g0258841 Lupinus albus HOM05D001803 ORTHO05D001686 3.4e-23 111.3 67 79.1
Lalb_Chr05g0218921 Lupinus albus HOM05D001803 ORTHO05D001686 3.4e-23 111.3 66 80.3
CAN.G322.79 Capsicum annuum HOM05D001803 ORTHO05D001686 4.4e-23 110.9 67 79.1
COL.COLO4_11736 Corchorus olitorius HOM05D001803 ORTHO05D001686 4.4e-23 110.9 67 79.1
HanXRQChr10g0303381 Helianthus annuus HOM05D001803 ORTHO05D001686 4.4e-23 110.9 67 80.6
Lsat_1_v5_gn_7_87460 Lactuca sativa HOM05D001803 ORTHO05D001686 4.4e-23 110.9 67 77.6
Medtr4g087210 Medicago truncatula HOM05D001803 ORTHO05D001686 4.4e-23 110.9 66 78.8
Oeu003703.1 Olea europaea HOM05D001803 ORTHO05D001686 4.4e-23 110.9 67 79.1
Phvul.003G296000 Phaseolus vulgaris HOM05D001803 ORTHO05D001686 4.4e-23 110.9 66 78.8
arahy.Tifrunner.gnm1.ann1.6T17GH Arachis hypogaea HOM05D001803 ORTHO05D001686 5.7e-23 110.5 66 78.8
arahy.Tifrunner.gnm1.ann1.9UJZ67 Arachis hypogaea HOM05D001803 ORTHO05D001686 5.7e-23 110.5 66 78.8
Duzib052G0923 Durio zibethinus HOM05D001803 ORTHO05D001686 5.7e-23 110.5 67 79.1
Eucgr.G01512 Eucalyptus grandis HOM05D001803 ORTHO05D001686 5.7e-23 110.5 67 79.1
Duzib132G0486 Durio zibethinus HOM05D001803 ORTHO05D001686 7.5e-23 110.2 67 79.1
Psat7g120600 Pisum sativum HOM05D001803 ORTHO05D001686 7.5e-23 110.2 66 78.8
Atru.BG.61.p Acer truncatum HOM05D001803 ORTHO05D001686 9.8e-23 109.8 67 79.1
CAN.G247.9 Capsicum annuum HOM05D000122 ORTHO05D001686 9.8e-23 109.8 67 76.1
Medtr1g034190 Medicago truncatula HOM05D001803 ORTHO05D001686 9.8e-23 109.8 67 79.1
Psat0s4052g0040 Pisum sativum HOM05D001803 ORTHO05D001686 9.8e-23 109.8 67 79.1
Hund06198 Selenicereus undatus HOM05D001803 ORTHO05D001686 9.8e-23 109.8 67 77.6
ECA236G2218 Erigeron canadensis HOM05D001803 ORTHO05D001686 1.3e-22 109.4 67 77.6
Lj4g0025953 Lotus japonicus HOM05D001803 ORTHO05D001686 1.3e-22 109.4 66 78.8
THA.LOC104819594 Tarenaya hassleriana HOM05D001803 ORTHO05D001686 1.3e-22 109.4 67 79.1
Cpa.g.sc62.74 Carica papaya HOM05D001803 ORTHO05D001686 1.7e-22 109.0 67 77.6
Eucgr.L00818 Eucalyptus grandis HOM05D001803 ORTHO05D001686 1.7e-22 109.0 67 77.6
TPR.G18601 Trifolium pratense HOM05D001803 ORTHO05D001686 1.7e-22 109.0 67 77.6
Ca_18645_v3 Cicer arietinum L. HOM05D001803 ORTHO05D001686 2.2e-22 108.6 66 78.8
Glyma.02G136800 Glycine max HOM05D001803 ORTHO05D001686 2.2e-22 108.6 66 78.8
Potri.004G146600 Populus trichocarpa HOM05D001803 ORTHO05D001686 2.2e-22 108.6 67 76.1
SGA_v2.0_scaffold55G19828 Striga asiatica HOM05D001803 ORTHO05D001686 2.2e-22 108.6 67 77.6
Thecc.02G093500 Theobroma cacao HOM05D001803 ORTHO05D001686 2.2e-22 108.6 67 79.1
TWI79G0486 Tripterygium wilfordii HOM05D001803 ORTHO05D001686 2.2e-22 108.6 67 77.6
Ah.01g019940 Amaranthus hybridus HOM05D001803 ORTHO05D001686 2.8e-22 108.2 67 77.6
SalBow6G5061 Salvia bowleyana HOM05D001803 ORTHO05D001686 2.8e-22 108.2 67 77.6
Sc18g0004960 Simmondsia chinensis HOM05D001803 ORTHO05D001686 2.8e-22 108.2 67 77.6
CSS0003812 Camellia sinensis var. sinensis HOM05D001803 ORTHO05D001686 3.7e-22 107.8 67 79.1
CSS0005890 Camellia sinensis var. sinensis HOM05D001803 ORTHO05D001686 3.7e-22 107.8 67 79.1
Lsat_1_v5_gn_5_117520 Lactuca sativa HOM05D001803 ORTHO05D001686 3.7e-22 107.8 67 77.6
Phvul.003G011400 Phaseolus vulgaris HOM05D001803 ORTHO05D001686 3.7e-22 107.8 67 76.1
TAR628G0570 Trochodendron aralioides HOM05D001803 ORTHO05D001686 3.7e-22 107.8 67 79.1
unitig_21.g20759 Utricularia gibba HOM05D001803 ORTHO05D001686 3.7e-22 107.8 66 78.8
Gohir.D12G026600 Gossypium hirsutum HOM05D001803 ORTHO05D001686 4.9e-22 107.5 67 76.1
Gorai.008G026900 Gossypium raimondii HOM05D001803 ORTHO05D001686 4.9e-22 107.5 67 76.1
Hma1.2p1_1353F.1_g277785 Hydrangea macrophylla HOM05D001803 ORTHO05D001686 4.9e-22 107.5 67 77.6
Hma1.2p1_1527F.1_g289020 Hydrangea macrophylla HOM05D001803 ORTHO05D001686 4.9e-22 107.5 67 77.6
Lj9C364G9 Lonicera japonica HOM05D001803 ORTHO05D001686 4.9e-22 107.5 67 77.6
Nn5g29394 Nelumbo nucifera HOM05D001803 ORTHO05D001686 4.9e-22 107.5 67 76.1
TPR.G23554 Trifolium pratense HOM05D001803 ORTHO05D001686 4.9e-22 107.5 66 77.3
AUR62011409 Chenopodium quinoa HOM05D001803 ORTHO05D001686 6.3e-22 107.1 67 77.6
THA.LOC104807343 Tarenaya hassleriana HOM05D001803 ORTHO05D001686 6.3e-22 107.1 67 77.6
Glyma.20G008800 Glycine max HOM05D001803 ORTHO05D001686 8.3e-22 106.7 67 74.6
AUR62016650 Chenopodium quinoa HOM05D001803 ORTHO05D001686 1.1e-21 106.3 67 76.1
Ciclev10027777m.g Citrus clementina HOM05D001803 ORTHO05D001686 1.1e-21 106.3 67 77.6
Aqoxy5G01411 Aquilegia oxysepala HOM05D001803 ORTHO05D001686 1.4e-21 105.9 67 74.6
Gohir.A12G025800 Gossypium hirsutum HOM05D001803 ORTHO05D001686 1.4e-21 105.9 67 74.6
CAN.G140.43 Capsicum annuum HOM05D001803 ORTHO05D001686 1.8e-21 105.5 71 67.6
EL10Ac9g21801 Beta vulgaris HOM05D001803 ORTHO05D001686 3.1e-21 104.8 67 77.6
PGR042G2750 Punica granatum HOM05D001803 ORTHO05D001686 4.1e-21 104.4 67 76.1
Sed0007182 Sechium edule HOM05D001803 ORTHO05D001686 4.1e-21 104.4 67 77.6
Ah.01g006510 Amaranthus hybridus HOM05D001803 ORTHO05D001686 9.1e-21 103.2 67 76.1
Gohir.A04G122000 Gossypium hirsutum HOM05D001803 ORTHO05D001686 9.1e-21 103.2 67 74.6
Gohir.D04G162900 Gossypium hirsutum HOM05D001803 ORTHO05D001686 9.1e-21 103.2 67 74.6
Gorai.012G150800 Gossypium raimondii HOM05D001803 ORTHO05D001686 9.1e-21 103.2 67 74.6
PSO170G3016 Papaver somniferum HOM05D001803 ORTHO05D001686 1.2e-20 102.8 67 73.1
PSO210G6448 Papaver somniferum HOM05D001803 ORTHO05D001686 1.2e-20 102.8 67 73.1
Aa31LG8G13420 Aethionema arabicum HOM05D001803 ORTHO05D001686 1.6e-20 102.4 67 73.1
SalBow3G0744 Salvia bowleyana HOM05D001803 ORTHO05D001686 1.6e-20 102.4 67 71.6
VMungo1215G2476 Vigna mungo HOM05D001803 ORTHO05D001686 1.6e-20 102.4 67 71.6
MBI16_g19890_MAGBIO Magnolia biondii HOM05D001803 ORTHO05D001686 2.0e-20 102.1 67 73.1
arahy.Tifrunner.gnm1.ann1.S0IMIY Arachis hypogaea HOM05D001803 ORTHO05D001686 2.7e-20 101.7 67 73.1
arahy.Tifrunner.gnm1.ann1.SRGC4D Arachis hypogaea HOM05D001803 ORTHO05D001686 2.7e-20 101.7 67 73.1
Hund00311 Selenicereus undatus HOM05D001803 ORTHO05D001686 2.7e-20 101.7 67 71.6
Thhalv10022527m.g Eutrema salsugineum HOM05D001803 ORTHO05D001686 3.5e-20 101.3 67 73.1
Nn6g32131 Nelumbo nucifera HOM05D001803 ORTHO05D001686 3.5e-20 101.3 67 73.1
CARHR106240 Cardamine hirsuta HOM05D001803 ORTHO05D001686 4.5e-20 100.9 67 73.1
Sp3g29210 Schrenkiella parvula HOM05D001803 ORTHO05D001686 4.5e-20 100.9 67 73.1
Nitab4.5_0001401g0150 Nicotiana tabacum HOM05D001803 ORTHO05D001686 7.7e-20 100.1 88 61.4
CDE01G0380 Ceratophyllum demersum HOM05D001803 ORTHO05D001686 1.3e-19 99.4 67 70.1
AL3G47740 Arabidopsis lyrata HOM05D001803 ORTHO05D001686 1.7e-19 99.0 67 71.6
AT2G15900 Arabidopsis thaliana HOM05D001803 ORTHO05D001686 1.7e-19 99.0 67 71.6
Carub.0003s2978 Capsella rubella HOM05D001803 ORTHO05D001686 1.7e-19 99.0 67 71.6
BcaC06g36097 Brassica carinata HOM05D001803 ORTHO05D001686 2.3e-19 98.6 67 71.6
A07p04900 Brassica napus HOM05D001803 ORTHO05D001686 2.3e-19 98.6 67 71.6
C07p07880 Brassica napus HOM05D001803 ORTHO05D001686 2.3e-19 98.6 67 71.6
BolC7t41204H Brassica oleracea HOM05D001803 ORTHO05D001686 2.3e-19 98.6 67 71.6
BraA07t28280Z Brassica rapa HOM05D001803 ORTHO05D001686 2.3e-19 98.6 67 71.6
Medtr4g101240 Medicago truncatula HOM05D001803 ORTHO05D001686 5.0e-19 97.4 63 74.6
BcaB03g16339 Brassica carinata HOM05D001803 ORTHO05D001686 1.5e-18 95.9 67 71.6
Carub.0003s2980 Capsella rubella HOM05D001803 ORTHO05D001686 3.3e-18 94.7 67 68.7
HanXRQChr04g0128361 Helianthus annuus HOM05D001803 ORTHO05D001686 3.3e-18 94.7 67 65.7
BcaB04g18790 Brassica carinata HOM05D001803 ORTHO05D001686 5.5e-18 94.0 67 68.7
HPP92_027076 Vanilla planifolia HOM05D001803 ORTHO05D001686 1.6e-17 92.4 67 67.2
SEGI_08511 Sequoiadendron giganteum HOM05D001803 ORTHO05D001686 3.0e-16 88.2 67 62.7
Zm00001eb202180 Zea mays HOM05D001803 ORTHO05D001686 4.0e-16 87.8 67 64.2
Actinidia00473 Actinidia chinensis HOM05D001803 ORTHO05D001686 1.2e-15 86.3 67 67.2
BcaC01g03982 Brassica carinata HOM05D001803 ORTHO05D001686 2.6e-15 85.1 67 64.2
C03p46530 Brassica napus HOM05D001803 ORTHO05D001686 2.6e-15 85.1 67 64.2
SMO147G0047 Selaginella moellendorffii HOM05D001803 ORTHO05D001686 1.7e-14 82.4 72 52.8
Pp3c10_18970 Physcomitrium patens HOM05D001803 ORTHO05D001686 1.1e-13 79.7 67 56.7
Pp3c17_21440 Physcomitrium patens HOM05D001803 ORTHO05D001686 1.8e-13 79.0 67 55.2
AagrBONN_evm.TU.Sc2ySwM_344.1122 Anthoceros agrestis HOM05D001803 ORTHO05D001686 1.0e-11 73.2 67 52.2
Ciclev10028148m.g Citrus clementina HOM05D001803 ORTHO05D001686 1.3e-11 72.8 51 70.6
Mapoly0039s0032 Marchantia polymorpha HOM05D001803 ORTHO05D001686 6.6e-11 70.5 67 50.7
Pp3c2_2780 Physcomitrium patens HOM05D001803 ORTHO05D001686 1.5e-10 69.3 66 53.0
HanXRQChr16g0505271 Helianthus annuus HOM05D001803 ORTHO05D001686 5.6e-10 67.4 40 80.0
Pp3c14_16910 Physcomitrium patens HOM05D001803 ORTHO05D001686 6.2e-09 63.9 66 47.0
Hma1.2p1_1353F.1_g277780 Hydrangea macrophylla HOM05D001803 ORTHO05D001686 8.9e-08 60.1 35 77.1
Hma1.2p1_1527F.1_g289033 Hydrangea macrophylla HOM05D001803 ORTHO05D001686 8.9e-08 60.1 35 77.1
TPR.G14914 Trifolium pratense HOM05D001803 ORTHO05D001686 4.4e-07 57.8 36 75.0
Rhsim08G0222700 Rhododendron simsii HOM05D001803 ORTHO05D001686 5.8e-07 57.4 67 41.8
TAR636G1769 Trochodendron aralioides HOM05D001803 ORTHO05D001686 2.9e-06 55.1 67 38.8
Potri.001G183100 Populus trichocarpa HOM05D001803 ORTHO05D001686 3.7e-06 54.7 67 38.8
DCAR_007565 Daucus carota HOM05D001803 ORTHO05D001686 4.9e-06 54.3 67 38.8
Sabra01G0144700 Salix brachista HOM05D001803 ORTHO05D001686 8.3e-06 53.5 67 37.3


User provided reference genes

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