Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen01g050610 Solanum pennellii HOM05D011801 ORTHO05D014157 4.3e-33 144.1 71 100.0
Solyc01g108390.3 Solanum lycopersicum HOM05D011801 ORTHO05D014157 3.6e-32 141.0 71 95.8
PGSC0003DMG400025896 Solanum tuberosum HOM05D011801 ORTHO05D014157 2.9e-29 131.3 72 90.3
CAN.G322.24 Capsicum annuum HOM05D011801 ORTHO05D014157 2.0e-27 125.2 71 88.7
Nitab4.5_0002462g0020 Nicotiana tabacum HOM05D011801 ORTHO05D014157 1.1e-23 112.8 65 84.6
Peaxi162Scf00016g00166 Petunia axillaris HOM05D011801 ORTHO05D014157 2.3e-23 111.7 68 76.5
CAN.G322.28 Capsicum annuum HOM05D011801 ORTHO05D014157 2.6e-22 108.2 67 70.1
Nitab4.5_0005583g0090 Nicotiana tabacum HOM05D011801 ORTHO05D014157 3.2e-20 101.3 57 84.2
Peaxi162Scf00003g00174 Petunia axillaris HOM05D011801 ORTHO05D014157 1.3e-18 95.9 71 62.0
Sopen01g050600 Solanum pennellii HOM05D011801 ORTHO05D014157 2.5e-17 91.7 68 57.4
Sopen01g050580 Solanum pennellii HOM05D011801 ORTHO05D014157 5.6e-17 90.5 68 55.9
Solyc01g108380.2 Solanum lycopersicum HOM05D011801 ORTHO05D014157 7.3e-17 90.1 68 55.9
PGSC0003DMG400042958 Solanum tuberosum HOM05D011801 ORTHO05D014157 2.1e-16 88.6 68 55.9
Peaxi162Scf00658g00047 Petunia axillaris HOM05D011801 ORTHO05D014157 4.7e-16 87.4 70 60.0
Nitab4.5_0029468g0010 Nicotiana tabacum HOM05D011801 ORTHO05D014157 6.2e-16 87.0 68 60.3
Eucgr.D01653 Eucalyptus grandis HOM05D001004 ORTHO05D000653 5.6e-09 63.9 68 41.2
Manes.05G086337 Manihot esculenta HOM05D001004 ORTHO05D000653 2.1e-08 62.0 65 47.7
Dinv44644 Davidia involucrata HOM05D001004 ORTHO05D000653 4.7e-08 60.8 69 42.0
SalBow6G4960 Salvia bowleyana HOM05D001004 ORTHO05D000653 8.1e-08 60.1 64 43.8
AT5G43580 Arabidopsis thaliana HOM05D001004 ORTHO05D000653 1.4e-07 59.3 67 40.3
Gorai.009G312600 Gossypium raimondii HOM05D001004 ORTHO05D000653 1.4e-07 59.3 64 45.3
SalBow6G6111 Salvia bowleyana HOM05D001004 ORTHO05D000653 1.4e-07 59.3 67 41.8
BcaB07g30343 Brassica carinata HOM05D001004 ORTHO05D000653 1.8e-07 58.9 67 44.8
THA.LOC104805628 Tarenaya hassleriana HOM05D001004 ORTHO05D000653 1.8e-07 58.9 63 42.9
CARHR180000 Cardamine hirsuta HOM05D001004 ORTHO05D000653 2.4e-07 58.5 66 37.9
EL10Ac5g10440 Beta vulgaris HOM05D001004 ORTHO05D000653 4.0e-07 57.8 64 45.3
Carub.0004s2093 Capsella rubella HOM05D001004 ORTHO05D000653 4.0e-07 57.8 66 42.4
CSS0019702 Camellia sinensis var. sinensis HOM05D001004 ORTHO05D000653 5.2e-07 57.4 61 45.9
Carub.0008s0505 Capsella rubella HOM05D001004 ORTHO05D000653 5.2e-07 57.4 67 40.3
Nitab4.5_0000302g0080 Nicotiana tabacum HOM05D001004 ORTHO05D000653 6.8e-07 57.0 69 40.6
Thecc.10G077700 Theobroma cacao HOM05D001004 ORTHO05D000653 6.8e-07 57.0 64 40.6
Actinidia08436 Actinidia chinensis HOM05D001004 ORTHO05D000653 8.9e-07 56.6 69 37.7
SalBow6G3365 Salvia bowleyana HOM05D001004 ORTHO05D000653 8.9e-07 56.6 69 39.1
Oeu032586.1 Olea europaea HOM05D001004 ORTHO05D000653 1.2e-06 56.2 67 41.8
SalBow6G5036 Salvia bowleyana HOM05D001004 ORTHO05D000653 1.2e-06 56.2 63 38.1
CSS0031008 Camellia sinensis var. sinensis HOM05D001004 ORTHO05D000653 1.5e-06 55.8 69 40.6
Potri.005G221000 Populus trichocarpa HOM05D001004 ORTHO05D000653 1.5e-06 55.8 69 39.1
Sed0018468 Sechium edule HOM05D001004 ORTHO05D000653 1.5e-06 55.8 69 36.2
Carub.0008s0506 Capsella rubella HOM05D001004 ORTHO05D000653 2.0e-06 55.5 67 38.8
COL.COLO4_12161 Corchorus olitorius HOM05D001004 ORTHO05D000653 2.0e-06 55.5 71 43.7
Migut.A00975 Erythranthe guttata HOM05D001004 ORTHO05D000653 2.0e-06 55.5 69 40.6
Manes.05G086328 Manihot esculenta HOM05D001004 ORTHO05D000653 2.0e-06 55.5 63 42.9
Potri.006G212000 Populus trichocarpa HOM05D001004 ORTHO05D000653 2.0e-06 55.5 69 43.5
SalBow6G2008 Salvia bowleyana HOM05D000195 ORTHO05D000653 2.0e-06 55.5 61 44.3
SalBow6G2779 Salvia bowleyana HOM05D001004 ORTHO05D000653 2.0e-06 55.5 69 39.1
Sp2g08390 Schrenkiella parvula HOM05D001004 ORTHO05D000653 2.0e-06 55.5 67 37.3
Thecc.10G078100 Theobroma cacao HOM05D001004 ORTHO05D000653 2.0e-06 55.5 64 40.6
TWI09G1179 Tripterygium wilfordii HOM05D001004 ORTHO05D000653 2.0e-06 55.5 63 44.4
BraA04t18431Z Brassica rapa HOM05D001004 ORTHO05D000653 2.6e-06 55.1 62 46.8
Dinv44643 Davidia involucrata HOM05D001004 ORTHO05D000653 2.6e-06 55.1 69 37.7
Eucgr.F00210 Eucalyptus grandis HOM05D001004 ORTHO05D000653 2.6e-06 55.1 65 43.1
HanXRQChr01g0014531 Helianthus annuus HOM05D001004 ORTHO05D000653 2.6e-06 55.1 69 37.7
Hma1.2p1_0650F.1_g195520 Hydrangea macrophylla HOM05D001004 ORTHO05D000653 2.6e-06 55.1 64 39.1
Thecc.05G233000 Theobroma cacao HOM05D001004 ORTHO05D000653 2.6e-06 55.1 61 45.9
TAR636G3448 Trochodendron aralioides HOM05D001004 ORTHO05D000653 2.6e-06 55.1 69 40.6
Actinidia05460 Actinidia chinensis HOM05D001004 ORTHO05D000653 3.4e-06 54.7 69 39.1
EL10Ac5g10441 Beta vulgaris HOM05D001004 ORTHO05D000653 3.4e-06 54.7 64 42.2
Migut.C00658 Erythranthe guttata HOM05D001004 ORTHO05D000653 3.4e-06 54.7 62 40.3
Eucgr.B01966 Eucalyptus grandis HOM05D001004 ORTHO05D000653 3.4e-06 54.7 66 39.4
Oeu002604.1 Olea europaea HOM05D001004 ORTHO05D000653 3.4e-06 54.7 67 38.8
THA.LOC109117082 Tarenaya hassleriana HOM05D001004 ORTHO05D000653 3.4e-06 54.7 69 43.5
Actinidia08437 Actinidia chinensis HOM05D001004 ORTHO05D000653 4.4e-06 54.3 69 36.2
Cc03_g04970 Coffea canephora HOM05D001004 ORTHO05D000653 4.4e-06 54.3 61 44.3
Thhalv10003305m.g Eutrema salsugineum HOM05D001004 ORTHO05D000653 4.4e-06 54.3 65 35.4
Eucgr.I00166 Eucalyptus grandis HOM05D001004 ORTHO05D000653 5.8e-06 53.9 62 45.2
Eucgr.I00167 Eucalyptus grandis HOM05D001004 ORTHO05D000653 5.8e-06 53.9 62 45.2
Manes.15G037300 Manihot esculenta HOM05D001004 ORTHO05D000653 5.8e-06 53.9 67 40.3
Potri.006G212200 Populus trichocarpa HOM05D001004 ORTHO05D000653 5.8e-06 53.9 69 42.0
Potri.010G075300 Populus trichocarpa HOM05D001004 ORTHO05D000653 5.8e-06 53.9 69 34.8
Potri.010G075501 Populus trichocarpa HOM05D001004 ORTHO05D000653 5.8e-06 53.9 69 34.8
Sabra06G0163400 Salix brachista HOM05D001004 ORTHO05D000653 5.8e-06 53.9 69 42.0
Eucgr.F00211 Eucalyptus grandis HOM05D001004 ORTHO05D000653 7.6e-06 53.5 67 40.3
Lsat_1_v5_gn_3_122520 Lactuca sativa HOM05D001004 ORTHO05D000653 7.6e-06 53.5 65 38.5
QL06p015886 Quercus lobata HOM05D001004 ORTHO05D000653 7.6e-06 53.5 69 36.2
THA.LOC104824172 Tarenaya hassleriana HOM05D001004 ORTHO05D000653 7.6e-06 53.5 69 39.1
Cc03_g04980 Coffea canephora HOM05D001004 ORTHO05D000653 9.9e-06 53.1 68 41.2
Migut.A00977 Erythranthe guttata HOM05D001004 ORTHO05D000653 9.9e-06 53.1 69 39.1
HanXRQChr01g0007271 Helianthus annuus HOM05D001004 ORTHO05D000653 9.9e-06 53.1 64 39.1
Thecc.10G078200 Theobroma cacao HOM05D001004 ORTHO05D000653 9.9e-06 53.1 64 40.6


User provided reference genes

Program Settings