Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen01g050330 Solanum pennellii HOM05D011234 ORTHO05D003195 4.0e-142 508.1 256 100.0
Solyc01g108100.3 Solanum lycopersicum HOM05D011234 ORTHO05D003195 7.4e-136 487.3 259 96.1
PGSC0003DMG401025788 Solanum tuberosum HOM05D011234 ORTHO05D003195 1.4e-126 456.4 257 89.9
Peaxi162Scf00016g01956 Petunia axillaris HOM05D011234 ORTHO05D003195 1.7e-71 273.5 239 62.3
PGSC0003DMG400006224 Solanum tuberosum HOM05D011234 ORTHO05D003195 4.6e-53 212.2 253 51.8
Solyc10g050220.2 Solanum lycopersicum HOM05D011234 ORTHO05D003195 1.1e-49 201.1 259 49.8
Sopen10g021380 Solanum pennellii HOM05D011234 ORTHO05D003195 4.9e-47 192.2 246 49.2
Nitab4.5_0002543g0100 Nicotiana tabacum HOM05D011234 ORTHO05D003195 3.3e-43 179.5 237 47.3
Nitab4.5_0007480g0060 Nicotiana tabacum HOM05D011234 ORTHO05D003195 3.6e-42 176.0 306 40.8
Peaxi162Scf00003g02336 Petunia axillaris HOM05D011234 ORTHO05D003195 1.9e-30 137.1 201 41.3
Dinv42162 Davidia involucrata HOM05D003792 ORTHO05D003195 5.5e-22 109.0 261 33.0
Oeu025580.1 Olea europaea HOM05D003792 ORTHO05D003195 2.7e-21 106.7 232 36.6
Cc02_g18840 Coffea canephora HOM05D011234 ORTHO05D003195 1.3e-20 104.4 250 34.8
CSS0015140 Camellia sinensis var. sinensis HOM05D003792 ORTHO05D003195 1.8e-20 104.0 241 32.0
Dinv15716 Davidia involucrata HOM05D003792 ORTHO05D003195 2.3e-20 103.6 249 34.9
Actinidia00436 Actinidia chinensis HOM05D003792 ORTHO05D003195 8.7e-20 101.7 253 34.0
GSVIVG01031734001 Vitis vinifera HOM05D003792 ORTHO05D003195 1.1e-17 94.7 256 32.8
QL11p035325 Quercus lobata HOM05D003792 ORTHO05D003195 6.9e-17 92.0 269 31.6
Migut.B00353 Erythranthe guttata HOM05D011234 ORTHO05D003195 2.0e-16 90.5 244 31.6
SalBow6G6536 Salvia bowleyana HOM05D011234 ORTHO05D003195 3.4e-16 89.7 250 30.8
Rhsim11G0165200 Rhododendron simsii HOM05D003792 ORTHO05D003195 5.5e-14 82.4 258 29.8
CSS0036112 Camellia sinensis var. sinensis HOM05D003792 ORTHO05D003195 1.6e-13 80.9 222 30.2
MSTRG.20159 Avicennia marina HOM05D011234 ORTHO05D003195 2.1e-13 80.5 250 30.4
Migut.N01186 Erythranthe guttata HOM05D011234 ORTHO05D003195 3.6e-13 79.7 214 32.2
MD05G1081700 Malus domestica HOM05D003792 ORTHO05D003195 2.3e-12 77.0 255 30.6
Oeu007289.1 Olea europaea HOM05D011234 ORTHO05D003195 3.9e-12 76.3 171 36.8
SGA_v2.0_scaffold32G13060 Striga asiatica HOM05D003792 ORTHO05D003195 5.1e-12 75.9 249 29.7
Lj4g0023306 Lotus japonicus HOM05D003792 ORTHO05D003195 1.5e-11 74.3 266 29.7
CANSAT25G2784 Cannabis sativa HOM05D003792 ORTHO05D003195 4.3e-11 72.8 232 28.4
CANSAT25G3506 Cannabis sativa HOM05D003792 ORTHO05D003195 4.3e-11 72.8 234 28.2
Thecc.02G101400 Theobroma cacao HOM05D003792 ORTHO05D003195 4.3e-11 72.8 251 29.5
Haze_10092 Corylus avellana HOM05D003792 ORTHO05D003195 7.4e-11 72.0 191 29.8
Lalb_Chr05g0219211 Lupinus albus HOM05D003792 ORTHO05D003195 9.7e-11 71.6 244 27.5
Aqoxy6G01313 Aquilegia oxysepala HOM05D003792 ORTHO05D003195 1.3e-10 71.2 223 29.6
vmacro02043 Vaccinium macrocarpon HOM05D003792 ORTHO05D003195 2.2e-10 70.5 85 42.4
Ciclev10029147m.g Citrus clementina HOM05D003792 ORTHO05D003195 6.3e-10 68.9 233 31.8
COL.COLO4_32649 Corchorus olitorius HOM05D003465 ORTHO05D004034 8.2e-10 68.6 129 34.9
Atru.chr5.2692 Acer truncatum HOM05D003792 ORTHO05D003195 1.4e-09 67.8 242 31.0
DCAR_019451 Daucus carota HOM05D003792 ORTHO05D003195 1.4e-09 67.8 193 30.1
Duzib248G0608 Durio zibethinus HOM05D003792 ORTHO05D003195 1.8e-09 67.4 253 30.0
TAR376G0615 Trochodendron aralioides HOM05D003792 ORTHO05D003195 1.8e-09 67.4 201 31.8
Medtr4g085990 Medicago truncatula HOM05D003792 ORTHO05D003195 2.4e-09 67.0 237 30.8
TAR381G1051 Trochodendron aralioides HOM05D003792 ORTHO05D003195 3.1e-09 66.6 253 28.9
MD15G1082300 Malus domestica HOM05D003792 ORTHO05D003195 5.3e-09 65.9 206 30.6
Potri.002G125900 Populus trichocarpa HOM05D003792 ORTHO05D003195 5.3e-09 65.9 257 27.2
Duzib052G0481 Durio zibethinus HOM05D003792 ORTHO05D003195 9.1e-09 65.1 252 29.8
Glyma.07G213000 Glycine max HOM05D003792 ORTHO05D003195 1.2e-08 64.7 197 31.0
TPR.G12693 Trifolium pratense HOM05D003792 ORTHO05D003195 1.2e-08 64.7 237 28.3
Dinv39314 Davidia involucrata HOM05D003792 ORTHO05D003195 1.5e-08 64.3 240 28.8
Potri.014G029000 Populus trichocarpa HOM05D003792 ORTHO05D003195 1.5e-08 64.3 257 28.8
Glyma.02G131800 Glycine max HOM05D003792 ORTHO05D003195 2.6e-08 63.5 255 27.5
GSVIVG01009490001 Vitis vinifera HOM05D003792 ORTHO05D003195 2.6e-08 63.5 236 28.8
Sed0006191 Sechium edule HOM05D003792 ORTHO05D003195 5.9e-08 62.4 198 29.3
MELO3C018454.2 Cucumis melo HOM05D003792 ORTHO05D003195 1.3e-07 61.2 244 30.3
Psat7g125520 Pisum sativum HOM05D003792 ORTHO05D003195 1.7e-07 60.8 193 29.0
TAR628G0921 Trochodendron aralioides HOM05D003792 ORTHO05D003195 2.9e-07 60.1 219 28.3
HanXRQChr09g0267581 Helianthus annuus HOM05D003792 ORTHO05D003195 3.8e-07 59.7 217 28.6
Eucgr.F00223 Eucalyptus grandis HOM05D003792 ORTHO05D003195 5.0e-07 59.3 227 27.3
Sabra14G0019900 Salix brachista HOM05D003792 ORTHO05D003195 5.0e-07 59.3 250 26.4
Phvul.003G291900 Phaseolus vulgaris HOM05D003792 ORTHO05D003195 6.5e-07 58.9 201 29.4
Cpa.g.sc62.6 Carica papaya HOM05D003792 ORTHO05D003195 8.5e-07 58.5 143 30.1
Manes.10G080100 Manihot esculenta HOM05D003792 ORTHO05D003195 8.5e-07 58.5 117 33.3
Dinv35957 Davidia involucrata HOM05D003792 ORTHO05D003195 1.1e-06 58.2 259 27.8
VMungo0251G0642 Vigna mungo HOM05D003792 ORTHO05D003195 1.1e-06 58.2 232 27.2
Aa31LG9G12960 Aethionema arabicum HOM05D003792 ORTHO05D003195 1.4e-06 57.8 226 26.5
MSTRG.5362 Avicennia marina HOM05D011234 ORTHO05D003195 1.9e-06 57.4 234 28.2
Gorai.008G024800 Gossypium raimondii HOM05D003792 ORTHO05D003195 1.9e-06 57.4 239 30.1
Gohir.D12G024500 Gossypium hirsutum HOM05D003792 ORTHO05D003195 2.5e-06 57.0 239 29.3
Prupe.8G126300 Prunus persica HOM05D003792 ORTHO05D003195 2.5e-06 57.0 94 36.2
TWI36G1706 Tripterygium wilfordii HOM05D003792 ORTHO05D003195 2.5e-06 57.0 252 25.4
MD08G1101100 Malus domestica HOM05D003792 ORTHO05D003195 3.2e-06 56.6 225 26.2
Sed0003020 Sechium edule HOM05D003792 ORTHO05D003195 4.2e-06 56.2 220 24.1
Aa31LG2G16400 Aethionema arabicum HOM05D009953 ORTHO05D003195 5.5e-06 55.8 242 28.1
Gohir.A12G023800 Gossypium hirsutum HOM05D003792 ORTHO05D003195 5.5e-06 55.8 233 29.6
AL7G17410 Arabidopsis lyrata HOM05D009953 ORTHO05D003195 7.2e-06 55.5 243 24.7
A06p48190 Brassica napus HOM05D003792 ORTHO05D003195 7.2e-06 55.5 237 28.7
BolC9t55450H Brassica oleracea HOM05D003792 ORTHO05D003195 7.2e-06 55.5 197 28.9
Oeu012963.1 Olea europaea HOM05D003792 ORTHO05D003195 7.2e-06 55.5 219 26.0
AL8G18050 Arabidopsis lyrata HOM05D003792 ORTHO05D003195 9.4e-06 55.1 199 30.2
ClCG02G005970 Citrullus lanatus HOM05D003792 ORTHO05D003195 9.4e-06 55.1 233 29.2
Sp2g07640 Schrenkiella parvula HOM05D003792 ORTHO05D003195 9.4e-06 55.1 247 27.1
Sp7g31710 Schrenkiella parvula HOM05D009953 ORTHO05D003195 9.4e-06 55.1 236 28.0
SpUn0117_0010 Schrenkiella parvula HOM05D003792 ORTHO05D003195 9.4e-06 55.1 247 27.1


User provided reference genes

Program Settings