Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen01g049790 Solanum pennellii HOM05D005496 ORTHO05D006677 3.6e-143 511.5 254 100.0
PGSC0003DMG402025863 Solanum tuberosum HOM05D005496 ORTHO05D006677 4.7e-143 511.1 254 99.6
Solyc01g107600.3 Solanum lycopersicum HOM05D005496 ORTHO05D006677 1.4e-142 509.6 254 99.2
Peaxi162Scf00016g02325 Petunia axillaris HOM05D005496 ORTHO05D006677 7.9e-130 467.2 282 83.7
Dinv15765 Davidia involucrata HOM05D005496 ORTHO05D006677 1.6e-127 459.5 254 87.4
Dinv42193 Davidia involucrata HOM05D005496 ORTHO05D006677 2.0e-125 452.6 254 86.2
Potri.009G095900 Populus trichocarpa HOM05D005496 ORTHO05D006677 2.0e-125 452.6 252 86.9
Migut.N01167 Erythranthe guttata HOM05D005496 ORTHO05D006677 7.6e-125 450.7 254 84.3
CSS0023946 Camellia sinensis var. sinensis HOM05D005496 ORTHO05D006677 9.9e-125 450.3 251 86.5
CSS0028960 Camellia sinensis var. sinensis HOM05D005496 ORTHO05D006677 9.9e-125 450.3 251 86.5
Cpa.g.sc106.90 Carica papaya HOM05D005496 ORTHO05D006677 9.9e-125 450.3 254 86.6
Cc02_g19260 Coffea canephora HOM05D005496 ORTHO05D006677 4.9e-124 448.0 264 83.0
Gohir.D12G022500 Gossypium hirsutum HOM05D005496 ORTHO05D006677 2.4e-123 445.7 251 85.7
DCAR_021987 Daucus carota HOM05D005496 ORTHO05D006677 5.5e-123 444.5 255 86.3
Manes.07G069764 Manihot esculenta HOM05D005496 ORTHO05D006677 5.5e-123 444.5 254 84.6
Gohir.A12G022100 Gossypium hirsutum HOM05D005496 ORTHO05D006677 7.1e-123 444.1 251 85.3
Thecc.02G107900 Theobroma cacao HOM05D005496 ORTHO05D006677 1.2e-122 443.4 254 85.8
TWI75G0729 Tripterygium wilfordii HOM05D005496 ORTHO05D006677 1.2e-122 443.4 254 85.4
Aqoxy6G02861 Aquilegia oxysepala HOM05D005496 ORTHO05D006677 1.6e-122 443.0 250 84.8
CSS0021038 Camellia sinensis var. sinensis HOM05D005496 ORTHO05D006677 1.6e-122 443.0 254 84.3
MSTRG.5341 Avicennia marina HOM05D005496 ORTHO05D006677 2.7e-122 442.2 250 83.2
Actinidia17481 Actinidia chinensis HOM05D005496 ORTHO05D006677 3.5e-122 441.8 254 83.1
Atru.chr5.2543 Acer truncatum HOM05D005496 ORTHO05D006677 4.6e-122 441.4 254 84.3
Atru.chr5.2566 Acer truncatum HOM05D005496 ORTHO05D006677 4.6e-122 441.4 254 84.3
TAR628G1491 Trochodendron aralioides HOM05D005496 ORTHO05D006677 6.0e-122 441.0 250 84.8
CiPaw.05G011600 Carya illinoinensis HOM05D005496 ORTHO05D006677 7.9e-122 440.7 255 85.1
Potri.001G300100 Populus trichocarpa HOM05D005496 ORTHO05D006677 7.9e-122 440.7 252 85.7
MSTRG.27744 Avicennia marina HOM05D005496 ORTHO05D006677 1.8e-121 439.5 254 81.9
TWI79G0817 Tripterygium wilfordii HOM05D005496 ORTHO05D006677 1.8e-121 439.5 254 84.6
TAR376G0359 Trochodendron aralioides HOM05D005496 ORTHO05D006677 2.3e-121 439.1 250 84.0
Sc18g0005590 Simmondsia chinensis HOM05D005496 ORTHO05D006677 3.0e-121 438.7 254 83.5
CiPaw.06G169300 Carya illinoinensis HOM05D005496 ORTHO05D006677 3.9e-121 438.3 255 84.3
GSVIVG01003155001 Vitis vinifera HOM05D005496 ORTHO05D006677 3.9e-121 438.3 258 84.1
CANSAT25G1824 Cannabis sativa HOM05D005496 ORTHO05D006677 5.1e-121 438.0 255 83.9
CANSAT25G2648 Cannabis sativa HOM05D005496 ORTHO05D006677 5.1e-121 438.0 255 83.9
FvH4_2g05170 Fragaria vesca HOM05D005496 ORTHO05D006677 8.7e-121 437.2 254 83.9
Medtr1g107430 Medicago truncatula HOM05D005496 ORTHO05D006677 8.7e-121 437.2 258 83.7
PSO675G7162 Papaver somniferum HOM05D005496 ORTHO05D006677 8.7e-121 437.2 250 83.2
TPR.G30567 Trifolium pratense HOM05D005496 ORTHO05D006677 1.1e-120 436.8 257 84.0
MD05G1089700 Malus domestica HOM05D005496 ORTHO05D006677 2.5e-120 435.6 251 84.9
CsaV3_7G008130 Cucumis sativus L. HOM05D005496 ORTHO05D006677 3.3e-120 435.3 254 83.5
RcHm_v2.0_Chr6g0255081 Rosa chinensis HOM05D005496 ORTHO05D006677 3.3e-120 435.3 254 83.1
Sed0010088 Sechium edule HOM05D005496 ORTHO05D006677 3.3e-120 435.3 254 82.7
Actinidia27972 Actinidia chinensis HOM05D005496 ORTHO05D006677 4.3e-120 434.9 281 77.9
ClCG02G006320 Citrullus lanatus HOM05D005496 ORTHO05D006677 4.3e-120 434.9 254 82.7
PSO541G0750 Papaver somniferum HOM05D005496 ORTHO05D006677 4.3e-120 434.9 250 83.2
THA.LOC104807241 Tarenaya hassleriana HOM05D005496 ORTHO05D006677 4.3e-120 434.9 254 82.3
MELO3C018493.2 Cucumis melo HOM05D005496 ORTHO05D006677 7.4e-120 434.1 254 82.7
Ca_11075_v3 Cicer arietinum L. HOM05D005496 ORTHO05D006677 1.3e-119 433.3 257 82.5
Eucgr.E02959 Eucalyptus grandis HOM05D005496 ORTHO05D006677 2.1e-119 432.6 254 83.5
Gohir.D01G008100 Gossypium hirsutum HOM05D005496 ORTHO05D006677 2.8e-119 432.2 254 83.1
Lj5g0001757 Lotus japonicus HOM05D005496 ORTHO05D006677 2.8e-119 432.2 254 83.1
Sed0023992 Sechium edule HOM05D005496 ORTHO05D006677 2.8e-119 432.2 254 81.5
Lalb_Chr06g0165461 Lupinus albus HOM05D005496 ORTHO05D006677 4.8e-119 431.4 254 83.9
Phvul.007G039900 Phaseolus vulgaris HOM05D005496 ORTHO05D006677 4.8e-119 431.4 256 83.6
Thhalv10022824m.g Eutrema salsugineum HOM05D005496 ORTHO05D006677 6.2e-119 431.0 254 81.9
Prupe.8G135000 Prunus persica HOM05D005496 ORTHO05D006677 6.2e-119 431.0 251 83.7
THA.LOC104819553 Tarenaya hassleriana HOM05D005496 ORTHO05D006677 1.8e-118 429.5 254 81.9
Glyma.10G262300 Glycine max HOM05D005496 ORTHO05D006677 4.0e-118 428.3 256 83.2
MD10G1096900 Malus domestica HOM05D005496 ORTHO05D006677 5.3e-118 427.9 251 82.9
Lalb_Chr21g0308341 Lupinus albus HOM05D005496 ORTHO05D006677 6.9e-118 427.6 258 82.2
PGR142G1113 Punica granatum HOM05D005496 ORTHO05D006677 9.0e-118 427.2 254 81.9
AT2G15240 Arabidopsis thaliana HOM05D005496 ORTHO05D006677 1.5e-117 426.4 254 80.3
Carub.0003s2908 Capsella rubella HOM05D005496 ORTHO05D006677 1.5e-117 426.4 254 80.7
AL3G46950 Arabidopsis lyrata HOM05D005496 ORTHO05D006677 2.0e-117 426.0 254 80.3
C07p08630 Brassica napus HOM05D005496 ORTHO05D006677 2.0e-117 426.0 254 81.1
FAN27G2869 Fragaria x ananassa HOM05D005496 ORTHO05D006677 3.4e-117 425.2 275 77.8
Sp3g28490 Schrenkiella parvula HOM05D005496 ORTHO05D006677 3.4e-117 425.2 251 80.9
BcaB07g31795 Brassica carinata HOM05D005496 ORTHO05D006677 4.5e-117 424.9 254 80.7
Glyma.20G128700 Glycine max HOM05D005496 ORTHO05D006677 7.6e-117 424.1 259 81.9
BolC9t54157H Brassica oleracea HOM05D005496 ORTHO05D006677 1.7e-116 422.9 253 80.6
Gorai.002G009400 Gossypium raimondii HOM05D005496 ORTHO05D006677 3.8e-116 421.8 254 80.7
Rhsim11G0160100 Rhododendron simsii HOM05D005496 ORTHO05D006677 3.8e-116 421.8 296 73.3
BraA07t28330Z Brassica rapa HOM05D005496 ORTHO05D006677 6.5e-116 421.0 256 79.7
A07p05380 Brassica napus HOM05D005496 ORTHO05D006677 2.5e-115 419.1 255 79.6
arahy.Tifrunner.gnm1.ann1.7NM92S Arachis hypogaea HOM05D005496 ORTHO05D006677 5.5e-115 417.9 256 83.2
arahy.Tifrunner.gnm1.ann1.CE7Z9D Arachis hypogaea HOM05D005496 ORTHO05D006677 1.6e-114 416.4 256 82.8
BolC7t41274H Brassica oleracea HOM05D005496 ORTHO05D006677 1.6e-114 416.4 238 83.2
ATR0691G184 Amborella trichopoda HOM05D005496 ORTHO05D006677 1.3e-113 413.3 249 79.5
HanXRQChr10g0292361 Helianthus annuus HOM05D005496 ORTHO05D006677 2.3e-113 412.5 251 78.1
HanXRQChr16g0509221 Helianthus annuus HOM05D005496 ORTHO05D006677 2.8e-111 405.6 251 76.9
CARHR105630 Cardamine hirsuta HOM05D005496 ORTHO05D006677 4.8e-111 404.8 225 84.0
BcaC04g23051 Brassica carinata HOM05D005496 ORTHO05D006677 1.1e-110 403.7 226 84.1
ECA236G0884 Erigeron canadensis HOM05D005496 ORTHO05D006677 1.5e-109 399.8 251 76.1
FAN15G3658 Fragaria x ananassa HOM05D005496 ORTHO05D006677 4.5e-109 398.3 248 80.6
A09p10680 Brassica napus HOM05D005496 ORTHO05D006677 5.0e-108 394.8 232 81.5
C09p12670 Brassica napus HOM05D005496 ORTHO05D006677 5.0e-108 394.8 232 81.5
BraA09t36711Z Brassica rapa HOM05D005496 ORTHO05D006677 4.3e-104 381.7 255 74.1
Lsat_1_v5_gn_7_86500 Lactuca sativa HOM05D005496 ORTHO05D006677 6.3e-103 377.9 222 80.6
Nn5g30423 Nelumbo nucifera HOM05D005496 ORTHO05D006677 8.2e-103 377.5 250 74.0
Os09g0109500 Oryza sativa ssp. japonica HOM05D005496 ORTHO05D006677 1.1e-102 377.1 250 74.8
FAN24G2091 Fragaria x ananassa HOM05D005496 ORTHO05D006677 1.7e-100 369.8 254 74.4
Pp3c22_1600 Physcomitrium patens HOM05D005496 ORTHO05D006677 2.2e-100 369.4 250 71.2
Sabra16G0188400 Salix brachista HOM05D005496 ORTHO05D006677 6.5e-100 367.9 280 70.0
Duzib052G0798 Durio zibethinus HOM05D005496 ORTHO05D006677 4.2e-99 365.2 251 73.7
Gorai.008G022900 Gossypium raimondii HOM05D005496 ORTHO05D006677 4.2e-99 365.2 220 81.4
Ciclev10029109m.g Citrus clementina HOM05D005496 ORTHO05D006677 1.2e-98 363.6 208 83.7
Psat6g219080 Pisum sativum HOM05D005496 ORTHO05D006677 1.2e-98 363.6 211 82.9
Mapoly0001s0126 Marchantia polymorpha HOM05D005496 ORTHO05D006677 2.7e-98 362.5 250 69.6
QL11p033686 Quercus lobata HOM05D005496 ORTHO05D006677 2.7e-98 362.5 453 47.2
Pp3c21_16720 Physcomitrium patens HOM05D005496 ORTHO05D006677 4.6e-98 361.7 250 69.2
Aa31LG8G13100 Aethionema arabicum HOM05D005496 ORTHO05D006677 1.4e-97 360.1 256 72.3
Gohir.A01G008000 Gossypium hirsutum HOM05D005496 ORTHO05D006677 1.3e-95 353.6 258 72.1
PGSC0003DMG401025863 Solanum tuberosum HOM05D005496 ORTHO05D006677 7.7e-93 344.4 210 84.8
unitig_699.g19872 Utricularia gibba HOM05D005496 ORTHO05D006677 1.7e-92 343.2 209 77.5
SMO358G0568 Selaginella moellendorffii HOM05D005496 ORTHO05D006677 5.0e-92 341.7 250 66.4
AagrBONN_evm.TU.Sc2ySwM_228.4354 Anthoceros agrestis HOM05D005496 ORTHO05D006677 6.5e-92 341.3 237 68.8
Hund00151 Selenicereus undatus HOM05D005496 ORTHO05D006677 8.5e-92 340.9 194 84.5
BcaC06g36040 Brassica carinata HOM05D005496 ORTHO05D006677 3.9e-89 332.0 199 79.9
Zm00001eb307360 Zea mays HOM05D005496 ORTHO05D006677 6.7e-89 331.3 249 69.1
Actinidia00410 Actinidia chinensis HOM05D005496 ORTHO05D006677 1.5e-88 330.1 242 70.2
Nitab4.5_0002815g0040 Nicotiana tabacum HOM05D005496 ORTHO05D006677 1.5e-88 330.1 254 70.9
BcaB03g16270 Brassica carinata HOM05D005496 ORTHO05D006677 1.3e-87 327.0 251 66.1
AUR62039077 Chenopodium quinoa HOM05D005496 ORTHO05D006677 1.4e-86 323.6 268 64.9
Duzib132G0296 Durio zibethinus HOM05D005496 ORTHO05D006677 1.9e-83 313.2 254 65.0
CDE02G0272 Ceratophyllum demersum HOM05D005496 ORTHO05D006677 7.2e-83 311.2 250 61.6
Lj5C214T6 Lonicera japonica HOM05D005496 ORTHO05D006677 2.7e-82 309.3 206 76.7
Actinidia05496 Actinidia chinensis HOM05D005496 ORTHO05D006677 1.1e-78 297.4 272 61.0
vmacro02003 Vaccinium macrocarpon HOM05D005496 ORTHO05D006677 3.1e-78 295.8 338 53.8
EL10Ac9g22275 Beta vulgaris HOM05D005496 ORTHO05D006677 5.0e-76 288.5 161 87.6
SGA_v2.0_scaffold13G06610 Striga asiatica HOM05D005496 ORTHO05D006677 6.5e-76 288.1 161 87.6
AUR62010309 Chenopodium quinoa HOM05D005496 ORTHO05D006677 8.0e-74 281.2 208 69.2
Oeu056146.1 Olea europaea HOM05D005496 ORTHO05D006677 2.2e-71 273.1 170 75.3
Cre06.g250350 Chlamydomonas reinhardtii HOM05D005496 ORTHO05D006677 3.1e-70 269.2 228 54.8
Sabra09G0073700 Salix brachista HOM05D005496 ORTHO05D006677 1.2e-69 267.3 284 53.9
MCO15G042 Micromonas commoda HOM05D005496 ORTHO05D006677 2.5e-67 259.6 230 53.0
PRCOL_00006227 Prasinoderma coloniale HOM05D005496 ORTHO05D006677 6.3e-63 245.0 231 53.2
SalBow3G0726 Salvia bowleyana HOM05D005496 ORTHO05D006677 2.3e-60 236.5 206 60.7
FAN20G2824 Fragaria x ananassa HOM05D005496 ORTHO05D006677 2.9e-60 236.1 144 84.0
Ah.01g018260 Amaranthus hybridus HOM05D005496 ORTHO05D006677 3.3e-59 232.6 173 69.4
HPP92_011625 Vanilla planifolia HOM05D005496 ORTHO05D006677 1.0e-57 227.6 147 72.1
BolC7t41273H Brassica oleracea HOM05D005496 ORTHO05D006677 1.3e-44 184.1 116 75.0
SEGI_40705 Sequoiadendron giganteum HOM05D005496 ORTHO05D006677 1.3e-44 184.1 112 77.7
Nitab4.5_0005392g0040 Nicotiana tabacum HOM05D005496 ORTHO05D006677 2.5e-43 179.9 254 48.0
Haze_10172 Corylus avellana HOM05D005496 ORTHO05D006677 1.2e-40 171.0 133 71.4
SEGI_21612 Sequoiadendron giganteum HOM05D005496 ORTHO05D006677 3.5e-37 159.5 91 79.1
CBR_g4069 Chara braunii HOM05D005496 ORTHO05D006677 8.1e-34 148.3 94 73.4
COL.COLO4_32594 Corchorus olitorius HOM05D005496 ORTHO05D006677 1.1e-33 147.9 174 48.3
CBR_g4071 Chara braunii HOM05D000019 ORTHO05D000048 4.1e-30 136.0 98 69.4
HPP92_026155 Vanilla planifolia HOM05D005496 ORTHO05D006677 1.1e-14 84.7 53 75.5


User provided reference genes

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