Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen01g048880 Solanum pennellii HOM05D007794 ORTHO05D009810 1.9e-214 748.8 350 100.0
PGSC0003DMG400005122 Solanum tuberosum HOM05D007794 ORTHO05D009810 8.2e-186 653.7 375 85.1
Solyc01g106520.1 Solanum lycopersicum HOM05D007794 ORTHO05D009810 8.7e-180 633.6 376 83.8
CAN.G504.32 Capsicum annuum HOM05D007794 ORTHO05D009810 7.4e-163 577.4 376 74.7
CAN.G1074.4 Capsicum annuum HOM05D007794 ORTHO05D009810 1.2e-149 533.5 375 71.2
PGSC0003DMG400010680 Solanum tuberosum HOM05D007794 ORTHO05D009810 2.7e-149 532.3 373 69.4
Nitab4.5_0002750g0070 Nicotiana tabacum HOM05D007794 ORTHO05D009810 5.3e-145 518.1 377 70.0
PGSC0003DMG400010679 Solanum tuberosum HOM05D007794 ORTHO05D009810 2.0e-144 516.2 372 69.1
Solyc01g106140.2 Solanum lycopersicum HOM05D007794 ORTHO05D009810 1.9e-142 509.6 372 68.8
Sopen01g048520 Solanum pennellii HOM05D007794 ORTHO05D009810 8.0e-141 504.2 369 68.8
Solyc01g106130.1 Solanum lycopersicum HOM05D007794 ORTHO05D009810 3.0e-140 502.3 374 67.4
CAN.G504.34 Capsicum annuum HOM05D007794 ORTHO05D009810 1.8e-137 493.0 349 68.2
Peaxi162Scf00016g03335 Petunia axillaris HOM05D007794 ORTHO05D009810 8.6e-119 431.0 328 65.5
Sopen01g048510 Solanum pennellii HOM05D007794 ORTHO05D009810 6.4e-90 335.1 265 65.3
Nitab4.5_0005908g0010 Nicotiana tabacum HOM05D007794 ORTHO05D009810 2.5e-86 323.2 380 48.4
Nitab4.5_0001477g0100 Nicotiana tabacum HOM05D007794 ORTHO05D009810 1.3e-79 300.8 377 45.1
Sopen01g048870 Solanum pennellii HOM05D007794 ORTHO05D009810 1.1e-76 291.2 381 46.2
Solyc01g106510.2 Solanum lycopersicum HOM05D007794 ORTHO05D009810 1.2e-75 287.7 381 45.4
Nitab4.5_0005609g0010 Nicotiana tabacum HOM05D007794 ORTHO05D009810 7.1e-73 278.5 356 45.5
PGSC0003DMG400035168 Solanum tuberosum HOM05D007794 ORTHO05D009810 2.6e-67 260.0 366 45.4
Peaxi162Scf00152g00085 Petunia axillaris HOM05D007794 ORTHO05D009810 2.4e-60 236.9 386 40.7
Hma1.2p1_0908F.1_g235600 Hydrangea macrophylla HOM05D007794 ORTHO05D009810 2.2e-53 213.8 384 34.9
Hma1.2p1_0908F.1_g235590 Hydrangea macrophylla HOM05D007794 ORTHO05D009810 4.8e-53 212.6 386 35.0
CAN.G504.74 Capsicum annuum HOM05D007794 ORTHO05D009810 1.2e-48 198.0 159 62.9
Rhsim05G0099600 Rhododendron simsii HOM05D007794 ORTHO05D009810 3.0e-47 193.4 350 38.0
vmacro00480 Vaccinium macrocarpon HOM05D007794 ORTHO05D009810 3.0e-47 193.4 390 35.9
Nitab4.5_0002750g0020 Nicotiana tabacum HOM05D007794 ORTHO05D009810 4.4e-46 189.5 362 36.7
Actinidia28021 Actinidia chinensis HOM05D007794 ORTHO05D009810 9.7e-46 188.3 386 34.7
Rhsim05G0099400 Rhododendron simsii HOM05D007794 ORTHO05D009810 1.7e-45 187.6 368 35.1
Oeu059895.1 Olea europaea HOM05D007794 ORTHO05D009810 4.8e-45 186.0 378 34.7
QL09p046398 Quercus lobata HOM05D007794 ORTHO05D009810 6.3e-45 185.7 346 36.7
Nitab4.5_0000935g0170 Nicotiana tabacum HOM05D007794 ORTHO05D009810 1.1e-44 184.9 362 35.4
Manes.10G095300 Manihot esculenta HOM05D007794 ORTHO05D009810 1.4e-44 184.5 370 35.7
Rhsim05G0099000 Rhododendron simsii HOM05D007794 ORTHO05D009810 4.1e-44 183.0 392 33.4
Sabra09G0060800 Salix brachista HOM05D007794 ORTHO05D009810 5.9e-43 179.1 363 34.7
Thecc.02G126700 Theobroma cacao HOM05D007794 ORTHO05D009810 7.7e-43 178.7 393 32.6
vmacro19603 Vaccinium macrocarpon HOM05D007794 ORTHO05D009810 2.2e-42 177.2 340 36.5
Ciclev10030159m.g Citrus clementina HOM05D007794 ORTHO05D009810 8.5e-42 175.3 380 35.0
Prupe.8G073600 Prunus persica HOM05D007794 ORTHO05D009810 4.2e-41 172.9 348 34.2
Manes.10G095400 Manihot esculenta HOM05D007794 ORTHO05D009810 7.2e-41 172.2 366 35.5
Solyc01g106530.1 Solanum lycopersicum HOM05D007794 ORTHO05D009810 2.8e-37 160.2 338 33.4
Manes.10G095500 Manihot esculenta HOM05D007794 ORTHO05D009810 5.3e-36 156.0 389 30.8
Glyma.08G066300 Glycine max HOM05D007794 ORTHO05D009810 2.6e-35 153.7 376 29.8
Nn3g21331 Nelumbo nucifera HOM05D007794 ORTHO05D009810 5.9e-35 152.5 414 30.0
Rhsim05G0098900 Rhododendron simsii HOM05D007794 ORTHO05D009810 5.9e-35 152.5 143 51.7
Migut.N01109 Erythranthe guttata HOM05D007794 ORTHO05D009810 2.7e-32 143.7 385 27.3
Potri.009G078900 Populus trichocarpa HOM05D007794 ORTHO05D009810 6.1e-32 142.5 138 55.8
Migut.K01245 Erythranthe guttata HOM05D007794 ORTHO05D009810 1.4e-31 141.4 388 27.1
VMungo0251G0278 Vigna mungo HOM05D007794 ORTHO05D009810 3.0e-31 140.2 368 29.6
Sopen01g048890 Solanum pennellii HOM05D007794 ORTHO05D009810 5.2e-31 139.4 302 35.4
Ciclev10030146m.g Citrus clementina HOM05D007794 ORTHO05D009810 4.4e-30 136.3 378 31.5
Migut.N01108 Erythranthe guttata HOM05D007794 ORTHO05D009810 4.4e-30 136.3 372 28.8
Oeu059893.1 Olea europaea HOM05D007794 ORTHO05D009810 1.3e-26 124.8 309 32.0
Ciclev10030054m.g Citrus clementina HOM05D007794 ORTHO05D009810 3.8e-26 123.2 116 53.4
TPR.G17365 Trifolium pratense HOM05D007794 ORTHO05D009810 8.5e-26 122.1 135 48.1
Migut.C00193 Erythranthe guttata HOM05D007794 ORTHO05D009810 6.1e-24 115.9 190 36.8
Peaxi162Scf00152g00088 Petunia axillaris HOM05D007794 ORTHO05D009810 6.8e-23 112.5 93 57.0
SGA_v2.0_scaffold207G41947 Striga asiatica HOM05D007794 ORTHO05D009810 5.7e-22 109.4 153 41.8
SGA_v2.0_scaffold207G41944 Striga asiatica HOM05D007794 ORTHO05D009810 7.5e-22 109.0 172 38.4
Migut.C00190 Erythranthe guttata HOM05D007794 ORTHO05D009810 3.7e-21 106.7 133 42.9
SGA_v2.0_scaffold207G41950 Striga asiatica HOM05D007794 ORTHO05D009810 2.4e-20 104.0 139 41.7
PGSC0003DMG400005121 Solanum tuberosum HOM05D007794 ORTHO05D009810 4.1e-20 103.2 79 58.2
Migut.C00191 Erythranthe guttata HOM05D007794 ORTHO05D009810 7.0e-20 102.4 194 35.1
Migut.C00196 Erythranthe guttata HOM05D007794 ORTHO05D009810 2.0e-19 100.9 136 37.5
SGA_v2.0_scaffold98G29290 Striga asiatica HOM05D007794 ORTHO05D009810 2.3e-18 97.4 139 40.3
Migut.C00192 Erythranthe guttata HOM05D007794 ORTHO05D009810 2.9e-18 97.1 117 43.6
Nn3g19115 Nelumbo nucifera HOM05D007794 ORTHO05D009810 5.0e-18 96.3 314 29.9
Migut.C00194 Erythranthe guttata HOM05D007794 ORTHO05D009810 8.6e-18 95.5 133 37.6
Migut.C00209 Erythranthe guttata HOM05D007794 ORTHO05D009810 8.6e-18 95.5 136 36.0
Migut.C00208 Erythranthe guttata HOM05D007794 ORTHO05D009810 1.9e-17 94.4 134 35.8
COL.COLO4_32419 Corchorus olitorius HOM05D007794 ORTHO05D009810 2.0e-14 84.3 317 30.3
Nn3g21338 Nelumbo nucifera HOM05D007794 ORTHO05D009810 2.6e-14 84.0 151 35.1
Migut.O00773 Erythranthe guttata HOM05D007794 ORTHO05D009810 5.7e-14 82.8 119 33.6
SGA_v2.0_scaffold98G29291 Striga asiatica HOM05D007794 ORTHO05D009810 1.3e-13 81.6 153 35.9
SGA_v2.0_scaffold207G41942 Striga asiatica HOM05D007794 ORTHO05D009810 3.2e-12 77.0 136 36.8
Dinv12023 Davidia involucrata HOM05D000151 ORTHO05D000074 9.2e-12 75.5 121 35.5
Dinv12036 Davidia involucrata HOM05D000151 ORTHO05D000074 9.2e-12 75.5 121 35.5
Actinidia01831 Actinidia chinensis HOM05D000151 ORTHO05D000074 1.3e-10 71.6 160 31.2
Dinv37496 Davidia involucrata HOM05D000151 ORTHO05D000074 3.9e-10 70.1 171 28.1
Migut.N01107 Erythranthe guttata HOM05D007794 ORTHO05D009810 3.9e-10 70.1 77 48.1
Aqoxy6G00559 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 1.5e-09 68.2 162 29.6
Dinv12037 Davidia involucrata HOM05D000151 ORTHO05D000074 5.6e-09 66.2 129 34.1
Rhsim05G0099100 Rhododendron simsii HOM05D007794 ORTHO05D009810 9.5e-09 65.5 260 26.9
Rhsim05G0099500 Rhododendron simsii HOM05D007794 ORTHO05D009810 3.6e-08 63.5 62 56.5
MD05G1357800 Malus domestica HOM05D000151 ORTHO05D000074 1.4e-07 61.6 162 28.4
Aqoxy5G03968 Aquilegia oxysepala HOM05D001286 ORTHO05D000440 3.1e-07 60.5 104 33.7
Dinv07015 Davidia involucrata HOM05D000151 ORTHO05D000074 3.1e-07 60.5 85 38.8
DCAR_022831 Daucus carota HOM05D000151 ORTHO05D000074 5.2e-07 59.7 105 39.0
Dinv00092 Davidia involucrata HOM05D000151 ORTHO05D000074 5.2e-07 59.7 120 31.7
MD05G1357500 Malus domestica HOM05D000151 ORTHO05D000074 5.2e-07 59.7 126 33.3
QL04p012604 Quercus lobata HOM05D000151 ORTHO05D000074 8.9e-07 58.9 80 36.2
MBI19_g47417_MAGBIO Magnolia biondii HOM05D007354 ORTHO05D006294 1.2e-06 58.5 114 33.3
RcHm_v2.0_Chr4g0434481 Rosa chinensis HOM05D008995 ORTHO05D000074 1.2e-06 58.5 357 22.4
Sed0022040 Sechium edule HOM05D008995 ORTHO05D000074 1.2e-06 58.5 91 36.3
Dinv37418 Davidia involucrata HOM05D000151 ORTHO05D000074 1.5e-06 58.2 180 27.2
MBI19_g14409_MAGBIO Magnolia biondii HOM05D007354 ORTHO05D006294 1.5e-06 58.2 114 33.3
Rhsim02G0140200 Rhododendron simsii HOM05D007794 ORTHO05D009810 1.5e-06 58.2 59 61.0
TAR636G2415 Trochodendron aralioides HOM05D001286 ORTHO05D000440 1.5e-06 58.2 116 31.0
Dinv37646 Davidia involucrata HOM05D000151 ORTHO05D000074 2.0e-06 57.8 294 22.4
MBI19_g31306_MAGBIO Magnolia biondii HOM05D007354 ORTHO05D006294 2.0e-06 57.8 114 33.3
Nitab4.5_0003074g0060 Nicotiana tabacum HOM05D000151 ORTHO05D000074 2.0e-06 57.8 119 28.6
TPR.G32148 Trifolium pratense HOM05D001479 ORTHO05D009810 2.0e-06 57.8 110 33.6
MSTRG.6367 Avicennia marina HOM05D000151 ORTHO05D000074 2.6e-06 57.4 88 33.0
EL10Ac2g04120 Beta vulgaris HOM05D000151 ORTHO05D000074 3.4e-06 57.0 149 29.5
Dinv05292 Davidia involucrata HOM05D003536 ORTHO05D004233 3.4e-06 57.0 167 26.9
Dinv37497 Davidia involucrata HOM05D000151 ORTHO05D000074 3.4e-06 57.0 138 27.5
Aqoxy7G00582 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 4.4e-06 56.6 127 29.1
Dinv38940 Davidia involucrata HOM05D000151 ORTHO05D000074 4.4e-06 56.6 106 31.1
Rhsim01G0011100 Rhododendron simsii HOM05D007354 ORTHO05D006294 4.4e-06 56.6 116 32.8
TAR626G1895 Trochodendron aralioides HOM05D000151 ORTHO05D000074 4.4e-06 56.6 99 35.4
Ciclev10024484m.g Citrus clementina HOM05D000151 ORTHO05D000074 7.5e-06 55.8 168 26.2
QL04p013569 Quercus lobata HOM05D000151 ORTHO05D000074 7.5e-06 55.8 80 35.0
Peaxi162Scf00300g00043 Petunia axillaris HOM05D000151 ORTHO05D000074 9.8e-06 55.5 109 34.9
RcHm_v2.0_Chr6g0291691 Rosa chinensis HOM05D000151 ORTHO05D000074 9.8e-06 55.5 166 27.7


User provided reference genes

Program Settings