Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen01g048520 Solanum pennellii HOM05D007794 ORTHO05D009810 1.6e-224 782.3 373 100.0
Solyc01g106140.2 Solanum lycopersicum HOM05D007794 ORTHO05D009810 1.1e-212 743.0 365 96.4
PGSC0003DMG400010679 Solanum tuberosum HOM05D007794 ORTHO05D009810 2.1e-200 702.2 365 91.5
PGSC0003DMG400010680 Solanum tuberosum HOM05D007794 ORTHO05D009810 3.1e-183 645.2 377 82.8
Solyc01g106130.1 Solanum lycopersicum HOM05D007794 ORTHO05D009810 1.9e-177 625.9 378 81.7
CAN.G1074.4 Capsicum annuum HOM05D007794 ORTHO05D009810 1.4e-172 609.8 377 78.5
PGSC0003DMG400005122 Solanum tuberosum HOM05D007794 ORTHO05D009810 6.5e-165 584.3 379 76.3
Nitab4.5_0002750g0070 Nicotiana tabacum HOM05D007794 ORTHO05D009810 2.8e-160 568.9 380 72.6
CAN.G504.32 Capsicum annuum HOM05D007794 ORTHO05D009810 4.6e-155 551.6 379 72.0
Solyc01g106520.1 Solanum lycopersicum HOM05D007794 ORTHO05D009810 4.2e-148 528.5 369 71.3
Sopen01g048880 Solanum pennellii HOM05D007794 ORTHO05D009810 3.6e-139 498.8 369 68.8
Peaxi162Scf00016g03335 Petunia axillaris HOM05D007794 ORTHO05D009810 4.0e-138 495.4 329 71.1
CAN.G504.34 Capsicum annuum HOM05D007794 ORTHO05D009810 8.0e-131 471.1 378 62.7
Sopen01g048510 Solanum pennellii HOM05D007794 ORTHO05D009810 2.0e-126 456.4 269 82.5
Nitab4.5_0005908g0010 Nicotiana tabacum HOM05D007794 ORTHO05D009810 1.7e-88 330.5 383 47.3
Solyc01g106510.2 Solanum lycopersicum HOM05D007794 ORTHO05D009810 7.8e-86 321.6 386 47.7
Sopen01g048870 Solanum pennellii HOM05D007794 ORTHO05D009810 7.8e-86 321.6 386 47.7
Nitab4.5_0001477g0100 Nicotiana tabacum HOM05D007794 ORTHO05D009810 1.8e-82 310.5 380 45.5
Nitab4.5_0005609g0010 Nicotiana tabacum HOM05D007794 ORTHO05D009810 3.6e-75 286.2 357 45.9
PGSC0003DMG400035168 Solanum tuberosum HOM05D007794 ORTHO05D009810 2.2e-72 276.9 365 46.3
Peaxi162Scf00152g00085 Petunia axillaris HOM05D007794 ORTHO05D009810 2.6e-65 253.4 388 41.2
CAN.G504.74 Capsicum annuum HOM05D007794 ORTHO05D009810 5.6e-60 235.7 198 62.6
vmacro00480 Vaccinium macrocarpon HOM05D007794 ORTHO05D009810 7.1e-55 218.8 383 37.1
Actinidia28021 Actinidia chinensis HOM05D007794 ORTHO05D009810 9.3e-55 218.4 394 37.1
Hma1.2p1_0908F.1_g235600 Hydrangea macrophylla HOM05D007794 ORTHO05D009810 2.1e-54 217.2 390 34.9
Rhsim05G0099600 Rhododendron simsii HOM05D007794 ORTHO05D009810 1.0e-53 214.9 366 38.3
Hma1.2p1_0908F.1_g235590 Hydrangea macrophylla HOM05D007794 ORTHO05D009810 1.8e-53 214.2 396 34.3
QL09p046398 Quercus lobata HOM05D007794 ORTHO05D009810 9.7e-52 208.4 361 37.4
Oeu059895.1 Olea europaea HOM05D007794 ORTHO05D009810 1.6e-51 207.6 383 36.8
Nitab4.5_0000935g0170 Nicotiana tabacum HOM05D007794 ORTHO05D009810 3.7e-51 206.5 363 38.8
Rhsim05G0099000 Rhododendron simsii HOM05D007794 ORTHO05D009810 4.8e-51 206.1 395 34.9
Rhsim05G0099400 Rhododendron simsii HOM05D007794 ORTHO05D009810 1.4e-50 204.5 393 34.9
Nitab4.5_0002750g0020 Nicotiana tabacum HOM05D007794 ORTHO05D009810 2.4e-50 203.8 363 38.8
vmacro19603 Vaccinium macrocarpon HOM05D007794 ORTHO05D009810 4.1e-50 203.0 340 37.1
Manes.10G095300 Manihot esculenta HOM05D007794 ORTHO05D009810 7.7e-49 198.7 378 36.0
Sabra09G0060800 Salix brachista HOM05D007794 ORTHO05D009810 2.9e-48 196.8 376 35.1
Manes.10G095400 Manihot esculenta HOM05D007794 ORTHO05D009810 1.4e-47 194.5 367 36.2
Manes.10G095500 Manihot esculenta HOM05D007794 ORTHO05D009810 1.4e-47 194.5 401 33.9
Thecc.02G126700 Theobroma cacao HOM05D007794 ORTHO05D009810 1.9e-47 194.1 403 34.7
Rhsim05G0098900 Rhododendron simsii HOM05D007794 ORTHO05D009810 1.2e-46 191.4 179 50.8
Prupe.8G073600 Prunus persica HOM05D007794 ORTHO05D009810 7.9e-46 188.7 353 35.1
Nn3g21331 Nelumbo nucifera HOM05D007794 ORTHO05D009810 2.8e-43 180.3 415 32.8
Ciclev10030159m.g Citrus clementina HOM05D007794 ORTHO05D009810 1.1e-42 178.3 391 34.5
Potri.009G078900 Populus trichocarpa HOM05D007794 ORTHO05D009810 5.9e-41 172.6 190 48.9
VMungo0251G0278 Vigna mungo HOM05D007794 ORTHO05D009810 4.2e-39 166.4 373 31.4
Sopen01g048890 Solanum pennellii HOM05D007794 ORTHO05D009810 2.1e-38 164.1 306 36.6
Glyma.08G066300 Glycine max HOM05D007794 ORTHO05D009810 1.8e-37 161.0 379 31.1
Migut.K01245 Erythranthe guttata HOM05D007794 ORTHO05D009810 4.8e-35 152.9 375 30.4
Migut.N01109 Erythranthe guttata HOM05D007794 ORTHO05D009810 6.3e-35 152.5 376 29.8
Oeu059893.1 Olea europaea HOM05D007794 ORTHO05D009810 3.1e-34 150.2 312 34.9
Migut.N01108 Erythranthe guttata HOM05D007794 ORTHO05D009810 3.4e-33 146.7 371 31.5
TPR.G17365 Trifolium pratense HOM05D007794 ORTHO05D009810 8.5e-32 142.1 157 49.7
Solyc01g106530.1 Solanum lycopersicum HOM05D007794 ORTHO05D009810 1.6e-30 137.9 352 31.2
Migut.C00196 Erythranthe guttata HOM05D007794 ORTHO05D009810 2.7e-30 137.1 157 42.7
Ciclev10030146m.g Citrus clementina HOM05D007794 ORTHO05D009810 8.0e-30 135.6 386 30.1
Migut.C00209 Erythranthe guttata HOM05D007794 ORTHO05D009810 1.4e-29 134.8 187 37.4
Migut.C00190 Erythranthe guttata HOM05D007794 ORTHO05D009810 5.2e-29 132.9 156 44.2
Migut.C00193 Erythranthe guttata HOM05D007794 ORTHO05D009810 5.7e-28 129.4 156 43.6
Nn3g19115 Nelumbo nucifera HOM05D007794 ORTHO05D009810 9.7e-28 128.6 318 35.5
Migut.C00191 Erythranthe guttata HOM05D007794 ORTHO05D009810 3.7e-27 126.7 156 42.3
Migut.C00194 Erythranthe guttata HOM05D007794 ORTHO05D009810 3.7e-27 126.7 157 40.1
SGA_v2.0_scaffold207G41950 Striga asiatica HOM05D007794 ORTHO05D009810 1.8e-26 124.4 163 42.9
SGA_v2.0_scaffold207G41944 Striga asiatica HOM05D007794 ORTHO05D009810 1.7e-24 117.9 394 28.7
Ciclev10030054m.g Citrus clementina HOM05D007794 ORTHO05D009810 8.5e-24 115.5 157 40.1
SGA_v2.0_scaffold207G41947 Striga asiatica HOM05D007794 ORTHO05D009810 9.4e-23 112.1 189 38.1
Migut.C00192 Erythranthe guttata HOM05D007794 ORTHO05D009810 1.2e-22 111.7 137 41.6
COL.COLO4_32419 Corchorus olitorius HOM05D007794 ORTHO05D009810 4.7e-22 109.8 325 30.2
SGA_v2.0_scaffold98G29290 Striga asiatica HOM05D007794 ORTHO05D009810 8.8e-21 105.5 153 42.5
Peaxi162Scf00152g00088 Petunia axillaris HOM05D007794 ORTHO05D009810 1.2e-20 105.1 96 52.1
SGA_v2.0_scaffold207G41942 Striga asiatica HOM05D007794 ORTHO05D009810 4.4e-20 103.2 200 34.5
Migut.N01107 Erythranthe guttata HOM05D007794 ORTHO05D009810 9.7e-20 102.1 126 45.2
Rhsim02G0140200 Rhododendron simsii HOM05D007794 ORTHO05D009810 2.4e-18 97.4 95 55.8
Migut.C00208 Erythranthe guttata HOM05D007794 ORTHO05D009810 3.1e-18 97.1 128 38.3
PGSC0003DMG400005121 Solanum tuberosum HOM05D007794 ORTHO05D009810 4.1e-18 96.7 83 51.8
Nn3g21338 Nelumbo nucifera HOM05D007794 ORTHO05D009810 2.2e-16 90.9 162 36.4
Migut.O00773 Erythranthe guttata HOM05D007794 ORTHO05D009810 6.5e-16 89.4 123 34.1
SGA_v2.0_scaffold98G29291 Striga asiatica HOM05D007794 ORTHO05D009810 1.5e-15 88.2 152 36.8
Cfa004824 Carpinus fangiana HOM05D007794 ORTHO05D009810 1.4e-13 81.6 146 39.0
Aqoxy6G00559 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 1.8e-13 81.3 176 29.0
TPR.G32148 Trifolium pratense HOM05D001479 ORTHO05D009810 2.3e-13 80.9 132 40.9
TAR636G2415 Trochodendron aralioides HOM05D001286 ORTHO05D000440 7.5e-12 75.9 231 28.6
Dinv12036 Davidia involucrata HOM05D000151 ORTHO05D000074 3.7e-11 73.6 183 29.0
Aqoxy2G00614 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 2.4e-10 70.9 132 34.8
Aqoxy7G00582 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 2.4e-10 70.9 178 27.0
Dinv12023 Davidia involucrata HOM05D000151 ORTHO05D000074 3.1e-10 70.5 137 32.1
Ciclev10009143m.g Citrus clementina HOM05D000151 ORTHO05D000074 1.2e-09 68.6 274 23.0
Lsat_1_v5_gn_3_47300 Lactuca sativa HOM05D004423 ORTHO05D005464 1.6e-09 68.2 209 30.1
Dinv37496 Davidia involucrata HOM05D000151 ORTHO05D000074 2.7e-09 67.4 181 27.1
MD05G1357800 Malus domestica HOM05D000151 ORTHO05D000074 5.9e-09 66.2 159 31.4
Actinidia01831 Actinidia chinensis HOM05D000151 ORTHO05D000074 7.7e-09 65.9 161 28.0
TAR629G0126 Trochodendron aralioides HOM05D000151 ORTHO05D000074 7.7e-09 65.9 192 27.1
Dinv40802 Davidia involucrata HOM05D000151 ORTHO05D000074 1.0e-08 65.5 239 25.1
Aqoxy4G03031 Aquilegia oxysepala HOM05D003035 ORTHO05D000440 1.7e-08 64.7 243 27.2
MD05G1357500 Malus domestica HOM05D000151 ORTHO05D000074 1.7e-08 64.7 128 33.6
Rhsim05G0099100 Rhododendron simsii HOM05D007794 ORTHO05D009810 1.7e-08 64.7 63 46.0
TAR636G3348 Trochodendron aralioides HOM05D000151 ORTHO05D000074 1.7e-08 64.7 199 27.1
arahy.Tifrunner.gnm1.ann1.PYC0TU Arachis hypogaea HOM05D000151 ORTHO05D000074 2.9e-08 63.9 177 32.2
Dinv07015 Davidia involucrata HOM05D000151 ORTHO05D000074 2.9e-08 63.9 139 32.4
Rhsim06G0217000 Rhododendron simsii HOM05D003035 ORTHO05D000440 2.9e-08 63.9 177 32.8
TAR629G1936 Trochodendron aralioides HOM05D000151 ORTHO05D000074 2.9e-08 63.9 163 29.4
Rhsim06G0217100 Rhododendron simsii HOM05D007354 ORTHO05D006294 6.6e-08 62.8 201 29.9
Lj2C484T9 Lonicera japonica HOM05D000151 ORTHO05D000074 8.6e-08 62.4 147 32.0
TAR371G0808 Trochodendron aralioides HOM05D000151 ORTHO05D000074 8.6e-08 62.4 181 30.4
RcHm_v2.0_Chr1g0376381 Rosa chinensis HOM05D000151 ORTHO05D000074 1.1e-07 62.0 137 35.8
Aqoxy4G00447 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 1.5e-07 61.6 131 32.8
Aqoxy7G00553 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 1.5e-07 61.6 181 24.9
RcHm_v2.0_Chr6g0279451 Rosa chinensis HOM05D000151 ORTHO05D000074 1.5e-07 61.6 198 26.3
TAR636G1620 Trochodendron aralioides HOM05D000151 ORTHO05D000074 1.5e-07 61.6 239 25.9
Dinv00092 Davidia involucrata HOM05D000151 ORTHO05D000074 2.5e-07 60.8 139 32.4
Prupe.8G172400 Prunus persica HOM05D000151 ORTHO05D000074 2.5e-07 60.8 180 27.8
Ciclev10029800m.g Citrus clementina HOM05D007794 ORTHO05D009810 3.3e-07 60.5 230 29.1
Glyma.04G019900 Glycine max HOM05D000151 ORTHO05D000074 3.3e-07 60.5 197 28.4
Rhsim05G0099500 Rhododendron simsii HOM05D007794 ORTHO05D009810 3.3e-07 60.5 60 55.0
Sed0022040 Sechium edule HOM05D008995 ORTHO05D000074 3.3e-07 60.5 91 38.5
PGSC0003DMG400012867 Solanum tuberosum HOM05D000151 ORTHO05D000074 3.3e-07 60.5 169 30.2
QL06p052453 Quercus lobata HOM05D000151 ORTHO05D000074 4.2e-07 60.1 172 29.1
RcHm_v2.0_Chr1g0376351 Rosa chinensis HOM05D000151 ORTHO05D000074 5.5e-07 59.7 137 35.0
TAR636G2284 Trochodendron aralioides HOM05D000151 ORTHO05D000074 5.5e-07 59.7 248 25.0
TAR636G2694 Trochodendron aralioides HOM05D000151 ORTHO05D000074 5.5e-07 59.7 248 25.0
FAN15G2361 Fragaria x ananassa HOM05D000151 ORTHO05D000074 7.2e-07 59.3 206 27.2
Lj2P496T12 Lonicera japonica HOM05D000151 ORTHO05D000074 7.2e-07 59.3 148 32.4
MBI16_g20802_MAGBIO Magnolia biondii HOM05D000151 ORTHO05D000074 7.2e-07 59.3 135 29.6
MBI19_g10186_MAGBIO Magnolia biondii HOM05D007354 ORTHO05D006294 9.5e-07 58.9 204 27.9
MBI19_g47417_MAGBIO Magnolia biondii HOM05D007354 ORTHO05D006294 1.2e-06 58.5 116 32.8
TPR.G13451 Trifolium pratense HOM05D003035 ORTHO05D000440 1.2e-06 58.5 137 32.8
TAR636G1293 Trochodendron aralioides HOM05D000151 ORTHO05D000074 1.2e-06 58.5 190 26.3
Haze_25744 Corylus avellana HOM05D015779 ORTHO05D000074 1.6e-06 58.2 135 33.3
Lj2P459T34 Lonicera japonica HOM05D000151 ORTHO05D000074 1.6e-06 58.2 127 29.1
Nn6g31858 Nelumbo nucifera HOM05D000151 ORTHO05D000074 1.6e-06 58.2 181 27.1
QL08p002650 Quercus lobata HOM05D003035 ORTHO05D000440 1.6e-06 58.2 154 30.5
TPR.G18028 Trifolium pratense HOM05D003035 ORTHO05D000440 1.6e-06 58.2 150 32.0
TAR636G3198 Trochodendron aralioides HOM05D000151 ORTHO05D000074 1.6e-06 58.2 179 27.9
CiPaw.08G070000 Carya illinoinensis HOM05D000151 ORTHO05D000074 2.1e-06 57.8 186 31.2
Haze_25743 Corylus avellana HOM05D015779 ORTHO05D000074 2.1e-06 57.8 135 34.1
MBI19_g14409_MAGBIO Magnolia biondii HOM05D007354 ORTHO05D006294 2.1e-06 57.8 114 33.3
TAR629G2629 Trochodendron aralioides HOM05D000151 ORTHO05D000074 2.1e-06 57.8 138 30.4
Lj2P493T22 Lonicera japonica HOM05D000151 ORTHO05D000074 2.8e-06 57.4 148 31.8
QL02p017356 Quercus lobata HOM05D000151 ORTHO05D000074 2.8e-06 57.4 168 29.2
CAN.G1804.2 Capsicum annuum HOM05D000151 ORTHO05D000074 3.6e-06 57.0 179 26.8
FvH4_4g02770 Fragaria vesca HOM05D000151 ORTHO05D000074 3.6e-06 57.0 144 31.2
FAN06G3143 Fragaria x ananassa HOM05D000151 ORTHO05D000074 3.6e-06 57.0 178 28.1
FAN24G3248 Fragaria x ananassa HOM05D000151 ORTHO05D000074 3.6e-06 57.0 206 26.7
Aqoxy7G03473 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 4.7e-06 56.6 177 27.7
EL10Ac2g03973 Beta vulgaris HOM05D000151 ORTHO05D000074 4.7e-06 56.6 129 31.8
COL.COLO4_12986 Corchorus olitorius HOM05D000151 ORTHO05D000074 4.7e-06 56.6 172 28.5
MD05G1128300 Malus domestica HOM05D000151 ORTHO05D000074 4.7e-06 56.6 156 28.8
PGSC0003DMG400012149 Solanum tuberosum HOM05D000151 ORTHO05D000074 4.7e-06 56.6 206 24.8
Aqoxy6G01684 Aquilegia oxysepala HOM05D001286 ORTHO05D000440 6.1e-06 56.2 139 30.9
CAN.G1166.9 Capsicum annuum HOM05D000151 ORTHO05D000074 6.1e-06 56.2 182 26.9
Dinv12037 Davidia involucrata HOM05D000151 ORTHO05D000074 6.1e-06 56.2 85 37.6
MBI19_g31306_MAGBIO Magnolia biondii HOM05D007354 ORTHO05D006294 6.1e-06 56.2 112 33.0
Manes.04G069000 Manihot esculenta HOM05D000151 ORTHO05D000074 6.1e-06 56.2 183 28.4
Peaxi162Scf00300g00043 Petunia axillaris HOM05D000151 ORTHO05D000074 6.1e-06 56.2 140 26.4
RcHm_v2.0_Chr1g0359461 Rosa chinensis HOM05D000151 ORTHO05D000074 6.1e-06 56.2 132 34.1
RcHm_v2.0_Chr6g0291671 Rosa chinensis HOM05D000151 ORTHO05D000074 6.1e-06 56.2 187 25.7
Aqoxy4G01250 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 8.0e-06 55.8 152 30.9
CiPaw.05G087200 Carya illinoinensis HOM05D000151 ORTHO05D000074 8.0e-06 55.8 187 26.2
MBI17_g17513_MAGBIO Magnolia biondii HOM05D000151 ORTHO05D000074 8.0e-06 55.8 172 25.0
Manes.18G008400 Manihot esculenta HOM05D000151 ORTHO05D000074 8.0e-06 55.8 188 29.3
Nn5g30876 Nelumbo nucifera HOM05D000151 ORTHO05D000074 8.0e-06 55.8 157 26.1
Prupe.6G178100 Prunus persica HOM05D008995 ORTHO05D000074 8.0e-06 55.8 146 28.1
QL11p053208 Quercus lobata HOM05D000151 ORTHO05D000074 8.0e-06 55.8 153 28.8
RcHm_v2.0_Chr4g0434481 Rosa chinensis HOM05D008995 ORTHO05D000074 8.0e-06 55.8 150 26.7
VMungo1080G0331 Vigna mungo HOM05D008995 ORTHO05D000074 8.0e-06 55.8 123 32.5


User provided reference genes

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