Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen01g048060 Solanum pennellii HOM05D007310 ORTHO05D002375 3.6e-112 408.3 213 100.0
Solyc01g105600.3 Solanum lycopersicum HOM05D007310 ORTHO05D002375 1.7e-109 399.4 213 98.1
PGSC0003DMG400012536 Solanum tuberosum HOM05D007310 ORTHO05D002375 3.5e-99 365.2 216 91.7
CAN.G523.36 Capsicum annuum HOM05D007310 ORTHO05D002375 2.6e-78 295.8 211 78.2
Nitab4.5_0006625g0010 Nicotiana tabacum HOM05D007310 ORTHO05D002375 2.7e-75 285.8 210 72.4
Nitab4.5_0000863g0020 Nicotiana tabacum HOM05D007310 ORTHO05D002375 1.4e-68 263.5 221 67.0
Peaxi162Scf00299g00914 Petunia axillaris HOM05D007310 ORTHO05D002375 2.0e-65 253.1 213 68.5
Migut.B00577 Erythranthe guttata HOM05D007310 ORTHO05D002375 2.6e-33 146.4 212 45.3
Dinv24166 Davidia involucrata HOM05D007310 ORTHO05D002375 4.1e-31 139.0 217 42.9
Oeu022081.1 Olea europaea HOM05D007310 ORTHO05D002375 1.2e-30 137.5 212 42.0
Rhsim05G0103200 Rhododendron simsii HOM05D007310 ORTHO05D002375 3.6e-27 125.9 221 43.0
CSS0047922 Camellia sinensis var. sinensis HOM05D007310 ORTHO05D002375 1.2e-25 120.9 228 38.2
HanXRQChr10g0290991 Helianthus annuus HOM05D007310 ORTHO05D002375 1.5e-25 120.6 211 40.8
SGA_v2.0_scaffold14G07142 Striga asiatica HOM05D007310 ORTHO05D002375 3.4e-25 119.4 209 40.2
Lalb_Chr09g0326871 Lupinus albus HOM05D007310 ORTHO05D002375 4.4e-25 119.0 159 42.8
SalBow8G1210 Salvia bowleyana HOM05D007310 ORTHO05D002375 9.8e-25 117.9 207 38.2
Cc02_g21140 Coffea canephora HOM05D007310 ORTHO05D002375 1.3e-24 117.5 217 36.4
Thecc.02G133200 Theobroma cacao HOM05D007310 ORTHO05D002375 2.2e-24 116.7 210 37.1
Duzib248G0762 Durio zibethinus HOM05D007310 ORTHO05D002375 3.7e-24 115.9 165 42.4
GSVIVG01015685001 Vitis vinifera HOM05D007310 ORTHO05D002375 6.4e-24 115.2 215 40.5
ECA234G2182 Erigeron canadensis HOM05D007310 ORTHO05D002375 5.4e-23 112.1 229 36.7
Potri.001G310100 Populus trichocarpa HOM05D007310 ORTHO05D002375 9.2e-23 111.3 209 37.3
Ciclev10030152m.g Citrus clementina HOM05D007310 ORTHO05D002375 2.7e-22 109.8 134 44.8
FAN24G3359 Fragaria x ananassa HOM05D007310 ORTHO05D004145 1.3e-21 107.5 160 42.5
Nn5g29980 Nelumbo nucifera HOM05D007310 ORTHO05D002375 1.3e-21 107.5 204 35.8
FvH4_2g13500 Fragaria vesca HOM05D007310 ORTHO05D002375 3.0e-21 106.3 160 41.9
FAN27G1440 Fragaria x ananassa HOM05D007310 ORTHO05D002375 8.6e-21 104.8 160 41.2
Prupe.8G066300 Prunus persica HOM05D007310 ORTHO05D002375 8.6e-21 104.8 118 48.3
Actinidia28038 Actinidia chinensis HOM05D007310 ORTHO05D002375 1.1e-20 104.4 194 40.7
Manes.07G035800 Manihot esculenta HOM05D007310 ORTHO05D002375 1.9e-20 103.6 223 35.4
Hma1.2p1_0784F.1_g217300 Hydrangea macrophylla HOM05D007310 ORTHO05D002375 3.3e-20 102.8 117 47.0
Eucgr.I02631 Eucalyptus grandis HOM05D007310 ORTHO05D002375 4.3e-20 102.4 145 42.1
Manes.07G038100 Manihot esculenta HOM05D007310 ORTHO05D002375 5.6e-20 102.1 147 41.5
TPR.G2868 Trifolium pratense HOM05D007310 ORTHO05D002375 2.8e-19 99.8 178 39.3
DCAR_021882 Daucus carota HOM05D007310 ORTHO05D002375 4.7e-19 99.0 217 33.6
Carub.0003s2834 Capsella rubella HOM05D007310 ORTHO05D002375 6.2e-19 98.6 202 34.7
Medtr4g093820 Medicago truncatula HOM05D007310 ORTHO05D002375 1.0e-18 97.8 175 38.3
Cfa005685 Carpinus fangiana HOM05D007310 ORTHO05D002375 3.1e-18 96.3 153 41.8
RcHm_v2.0_Chr7g0236611 Rosa chinensis HOM05D007310 ORTHO05D002375 5.2e-18 95.5 161 41.0
AT2G14095 Arabidopsis thaliana HOM05D007310 ORTHO05D002375 6.8e-18 95.1 148 39.2
Psat7g100440 Pisum sativum HOM05D007310 ORTHO05D002375 2.0e-17 93.6 164 37.2
CARHR104210 Cardamine hirsuta HOM05D007310 ORTHO05D002375 4.4e-17 92.4 118 44.1
Haze_10565 Corylus avellana HOM05D007310 ORTHO05D002375 7.5e-17 91.7 151 40.4
AL3G45790 Arabidopsis lyrata HOM05D007310 ORTHO05D002375 9.8e-17 91.3 198 33.8
arahy.Tifrunner.gnm1.ann1.KVX74B Arachis hypogaea HOM05D007310 ORTHO05D002375 9.8e-17 91.3 203 33.5
arahy.Tifrunner.gnm1.ann1.U7VQVC Arachis hypogaea HOM05D007310 ORTHO05D002375 9.8e-17 91.3 179 35.2
Potri.017G050000 Populus trichocarpa HOM05D007310 ORTHO05D002375 2.2e-16 90.1 188 35.6
VMungo0251G1327 Vigna mungo HOM05D007310 ORTHO05D002375 2.2e-16 90.1 202 33.2
COL.COLO4_32323 Corchorus olitorius HOM05D007310 ORTHO05D002375 6.4e-16 88.6 203 31.5
THA.LOC104804411 Tarenaya hassleriana HOM05D007310 ORTHO05D002375 1.4e-15 87.4 205 33.7
Glyma.13G042400 Glycine max HOM05D007310 ORTHO05D002375 2.4e-15 86.7 161 36.6
CiPaw.05G032100 Carya illinoinensis HOM05D007310 ORTHO05D002375 3.2e-15 86.3 122 41.8
Ca_18369_v3 Cicer arietinum L. HOM05D007310 ORTHO05D002375 9.2e-15 84.7 173 36.4
Duzib132G0922 Durio zibethinus HOM05D007310 ORTHO05D002375 1.6e-14 84.0 118 43.2
Cpa.g.sc42.21 Carica papaya HOM05D007310 ORTHO05D002375 2.0e-14 83.6 138 37.0
BcaB08g34551 Brassica carinata HOM05D007310 ORTHO05D002375 2.7e-14 83.2 157 36.3
FAN15G0442 Fragaria x ananassa HOM05D007310 ORTHO05D002375 3.5e-14 82.8 207 33.8
Gohir.D02G199400 Gossypium hirsutum HOM05D007310 ORTHO05D002375 1.0e-13 81.3 111 39.6
CANSAT11G0123 Cannabis sativa HOM05D007310 ORTHO05D002375 1.3e-13 80.9 147 38.1
QL11p023211 Quercus lobata HOM05D007310 ORTHO05D002375 1.3e-13 80.9 211 32.7
TWI14G0938 Tripterygium wilfordii HOM05D007310 ORTHO05D002375 1.7e-13 80.5 221 32.1
PGR142G1548 Punica granatum HOM05D007310 ORTHO05D002375 2.3e-13 80.1 224 34.4
Sp3g27450 Schrenkiella parvula HOM05D007310 ORTHO05D002375 3.9e-13 79.3 128 39.1
TAR625G1009 Trochodendron aralioides HOM05D007310 ORTHO05D002375 5.0e-13 79.0 180 32.8
MD05G1054900 Malus domestica HOM05D007310 ORTHO05D002375 1.1e-12 77.8 203 31.0
TAR376G0136 Trochodendron aralioides HOM05D007310 ORTHO05D002375 1.5e-12 77.4 209 34.4
Sabra16G0196000 Salix brachista HOM05D007310 ORTHO05D002375 2.5e-12 76.6 183 32.8
PSO761G0222 Papaver somniferum HOM05D007310 ORTHO05D002375 4.3e-12 75.9 176 28.4
Phvul.002G211100 Phaseolus vulgaris HOM05D007310 ORTHO05D002375 4.3e-12 75.9 161 33.5
CiPaw.06G156100 Carya illinoinensis HOM05D007310 ORTHO05D002375 7.3e-12 75.1 128 37.5
MBI06_g03314_MAGBIO Magnolia biondii HOM05D007310 ORTHO05D002375 7.3e-12 75.1 140 32.9
BcaC01g03103 Brassica carinata HOM05D007310 ORTHO05D002375 9.5e-12 74.7 213 29.1
Thhalv10022863m.g Eutrema salsugineum HOM05D007310 ORTHO05D002375 1.6e-11 73.9 180 30.6
Lj4g0014623 Lotus japonicus HOM05D007310 ORTHO05D002375 4.7e-11 72.4 174 33.9
BraA03t13650Z Brassica rapa HOM05D007310 ORTHO05D002375 1.4e-10 70.9 213 28.2
Atru.chr13.1111 Acer truncatum HOM05D004728 ORTHO05D002375 1.8e-10 70.5 133 34.6
CSS0048944 Camellia sinensis var. sinensis HOM05D007310 ORTHO05D002375 4.0e-10 69.3 64 54.7
Aa31LG8G12500 Aethionema arabicum HOM05D007310 ORTHO05D002375 6.8e-10 68.6 121 34.7
A03p45150 Brassica napus HOM05D007310 ORTHO05D002375 6.8e-10 68.6 213 27.7
C03p56020 Brassica napus HOM05D007310 ORTHO05D002375 8.9e-10 68.2 214 28.5
BolC3t17888H Brassica oleracea HOM05D007310 ORTHO05D002375 8.9e-10 68.2 214 28.5
Sabra17G0036600 Salix brachista HOM05D007310 ORTHO05D002375 1.5e-09 67.4 99 42.4
Gorai.005G224000 Gossypium raimondii HOM05D007310 ORTHO05D002375 2.0e-09 67.0 206 31.1
Sc08g0003780 Simmondsia chinensis HOM05D007310 ORTHO05D002375 3.4e-09 66.2 215 28.8
Sabra17G0042000 Salix brachista HOM05D007310 ORTHO05D002375 9.8e-09 64.7 103 38.8
Actinidia10351 Actinidia chinensis HOM05D007310 ORTHO05D002375 2.2e-08 63.5 132 36.4
Nn1g05467 Nelumbo nucifera HOM05D004728 ORTHO05D002375 3.7e-08 62.8 109 33.9
Migut.L00163 Erythranthe guttata HOM05D004728 ORTHO05D002375 4.9e-08 62.4 135 31.1
PSO700G0139 Papaver somniferum HOM05D007310 ORTHO05D002375 4.9e-08 62.4 114 29.8
MD08G1189800 Malus domestica HOM05D004728 ORTHO05D002375 1.1e-07 61.2 167 26.9
CSS0024408 Camellia sinensis var. sinensis HOM05D007310 ORTHO05D002375 1.9e-07 60.5 74 50.0
PSO761G0559 Papaver somniferum HOM05D015253 ORTHO05D002375 2.4e-07 60.1 106 33.0
MELO3C018616.2 Cucumis melo HOM05D007310 ORTHO05D002375 3.2e-07 59.7 188 28.2
Duzib147G1195 Durio zibethinus HOM05D004728 ORTHO05D002375 3.2e-07 59.7 206 28.6
Glyma.08G070200 Glycine max HOM05D007310 ORTHO05D002375 3.2e-07 59.7 179 27.9
Cfa017900 Carpinus fangiana HOM05D004728 ORTHO05D002375 4.1e-07 59.3 161 26.7
Atru.chr6.1218 Acer truncatum HOM05D007310 ORTHO05D002375 9.2e-07 58.2 90 42.2
Dinv07081 Davidia involucrata HOM05D004728 ORTHO05D002375 9.2e-07 58.2 137 30.7
PGR042G1769 Punica granatum HOM05D004728 ORTHO05D002375 9.2e-07 58.2 131 29.8
Zm00001eb027840 Zea mays HOM05D007310 ORTHO05D002375 9.2e-07 58.2 120 33.3
HanXRQChr17g0556321 Helianthus annuus HOM05D004728 ORTHO05D002375 1.2e-06 57.8 137 27.7
TAR376G0070 Trochodendron aralioides HOM05D015253 ORTHO05D002375 1.2e-06 57.8 151 29.1
ECA247G1585 Erigeron canadensis HOM05D004728 ORTHO05D002375 1.6e-06 57.4 153 28.8
Sed0021578 Sechium edule HOM05D007310 ORTHO05D002375 1.6e-06 57.4 123 32.5
HanXRQChr17g0561041 Helianthus annuus HOM05D004728 ORTHO05D002375 2.1e-06 57.0 121 29.8
Migut.C01097 Erythranthe guttata HOM05D004728 ORTHO05D002375 2.7e-06 56.6 189 27.5
MD15G1377600 Malus domestica HOM05D004728 ORTHO05D002375 4.6e-06 55.8 135 29.6
CsaV3_7G006790 Cucumis sativus L. HOM05D007310 ORTHO05D002375 6.0e-06 55.5 99 34.3
HanXRQChr17g0556311 Helianthus annuus HOM05D004728 ORTHO05D002375 6.0e-06 55.5 128 28.1
Os09g0468900 Oryza sativa ssp. japonica HOM05D026744 ORTHO05D012887 6.0e-06 55.5 125 34.4
Aqoxy6G00703 Aquilegia oxysepala HOM05D004728 ORTHO05D002375 7.8e-06 55.1 203 28.6
CSS0049063 Camellia sinensis var. sinensis HOM05D004728 ORTHO05D002375 7.8e-06 55.1 157 28.7


User provided reference genes

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