Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen01g047120 Solanum pennellii HOM05D000312 ORTHO05D011153 2.4e-68 261.9 124 100.0
Nitab4.5_0000249g0280 Nicotiana tabacum HOM05D000312 ORTHO05D000221 1.2e-27 126.7 122 56.6
Nitab4.5_0003071g0050 Nicotiana tabacum HOM05D000312 ORTHO05D000221 4.7e-27 124.8 121 55.4
CAN.G1352.2 Capsicum annuum HOM05D000312 ORTHO05D000221 2.3e-26 122.5 120 57.5
CAN.G1352.9 Capsicum annuum HOM05D000312 ORTHO05D000221 5.5e-20 101.3 105 58.1
CAN.G1352.6 Capsicum annuum HOM05D000312 ORTHO05D011153 3.0e-18 95.5 97 58.8
Nitab4.5_0000259g0190 Nicotiana tabacum HOM05D000312 ORTHO05D000221 4.5e-14 81.6 121 39.7
Nitab4.5_0012307g0010 Nicotiana tabacum HOM05D000312 ORTHO05D011153 5.9e-14 81.3 121 42.1
Peaxi162Scf00179g00715 Petunia axillaris HOM05D000312 ORTHO05D000221 2.9e-13 79.0 121 39.7
Peaxi162Scf00179g00626 Petunia axillaris HOM05D000312 ORTHO05D000221 5.0e-13 78.2 125 38.4
CAN.G62.41 Capsicum annuum HOM05D000537 ORTHO05D011153 5.5e-12 74.7 126 38.1
Nitab4.5_0013991g0010 Nicotiana tabacum HOM05D000312 ORTHO05D000221 7.2e-12 74.3 121 38.8
PGSC0003DMG400025114 Solanum tuberosum HOM05D000312 ORTHO05D000221 1.6e-11 73.2 121 37.2
Peaxi162Scf00179g00816 Petunia axillaris HOM05D000312 ORTHO05D000221 1.0e-10 70.5 121 34.7
Nitab4.5_0003071g0020 Nicotiana tabacum HOM05D000312 ORTHO05D000221 1.4e-10 70.1 43 67.4
Peaxi162Scf00179g00627 Petunia axillaris HOM05D000312 ORTHO05D000221 1.4e-10 70.1 117 36.8
Peaxi162Scf00188g00541 Petunia axillaris HOM05D000312 ORTHO05D000221 2.3e-10 69.3 119 37.0
Peaxi162Scf00980g00130 Petunia axillaris HOM05D000312 ORTHO05D000221 6.8e-10 67.8 107 42.1
CAN.G184.26 Capsicum annuum HOM05D000312 ORTHO05D000221 8.8e-10 67.4 120 37.5
Peaxi162Scf00179g00710 Petunia axillaris HOM05D000312 ORTHO05D000221 1.2e-09 67.0 107 40.2
Sopen05g006190 Solanum pennellii HOM05D000312 ORTHO05D011153 1.2e-09 67.0 105 39.0
Sopen05g006160 Solanum pennellii HOM05D000312 ORTHO05D011153 2.0e-09 66.2 122 38.5
Peaxi162Scf00179g00815 Petunia axillaris HOM05D000312 ORTHO05D000221 4.4e-09 65.1 108 39.8
Sopen05g006140 Solanum pennellii HOM05D000312 ORTHO05D000221 5.7e-09 64.7 118 36.4
Peaxi162Scf00980g00131 Petunia axillaris HOM05D000312 ORTHO05D000221 7.5e-09 64.3 109 37.6
PGSC0003DMG400013311 Solanum tuberosum HOM05D000312 ORTHO05D000221 7.5e-09 64.3 112 39.3
Sopen05g006150 Solanum pennellii HOM05D000312 ORTHO05D000221 9.8e-09 63.9 120 39.2
Sopen11g006330 Solanum pennellii HOM05D000312 ORTHO05D000221 1.3e-08 63.5 112 39.3
CAN.G184.28 Capsicum annuum HOM05D000312 ORTHO05D000221 1.7e-08 63.2 124 32.3
CAN.G184.31 Capsicum annuum HOM05D000312 ORTHO05D000221 1.7e-08 63.2 118 37.3
Nitab4.5_0010778g0010 Nicotiana tabacum HOM05D000312 ORTHO05D000221 1.7e-08 63.2 119 34.5
Nitab4.5_0001438g0180 Nicotiana tabacum HOM05D000312 ORTHO05D000221 2.8e-08 62.4 101 39.6
PGSC0003DMG400025093 Solanum tuberosum HOM05D000312 ORTHO05D000221 3.7e-08 62.0 120 38.3
Nitab4.5_0000027g0280 Nicotiana tabacum HOM05D000312 ORTHO05D000221 4.9e-08 61.6 103 35.0
Nitab4.5_0000021g0680 Nicotiana tabacum HOM05D000312 ORTHO05D020289 6.3e-08 61.2 107 38.3
Nitab4.5_0008587g0010 Nicotiana tabacum HOM05D000312 ORTHO05D000221 1.8e-07 59.7 141 33.3
Nitab4.5_0000259g0210 Nicotiana tabacum HOM05D000312 ORTHO05D000221 5.4e-07 58.2 104 35.6
Nitab4.5_0006160g0020 Nicotiana tabacum HOM05D000312 ORTHO05D000221 5.4e-07 58.2 110 35.5
Peaxi162Scf00124g01311 Petunia axillaris HOM05D000312 ORTHO05D000221 5.4e-07 58.2 114 36.8
Peaxi162Scf00464g00436 Petunia axillaris HOM05D000312 ORTHO05D000221 5.4e-07 58.2 114 36.8
Nitab4.5_0000259g0220 Nicotiana tabacum HOM05D000312 ORTHO05D000221 1.2e-06 57.0 55 52.7
Peaxi162Scf00179g00628 Petunia axillaris HOM05D000312 ORTHO05D000221 1.6e-06 56.6 118 33.9
Peaxi162Scf00618g00630 Petunia axillaris HOM05D000312 ORTHO05D000221 1.6e-06 56.6 121 31.4
Nitab4.5_0001762g0020 Nicotiana tabacum HOM05D000312 ORTHO05D000221 2.0e-06 56.2 129 31.0
CAN.G184.29 Capsicum annuum HOM05D000312 ORTHO05D000221 5.9e-06 54.7 70 47.1
Nitab4.5_0007853g0030 Nicotiana tabacum HOM05D000312 ORTHO05D000221 5.9e-06 54.7 99 37.4
Peaxi162Scf00179g00625 Petunia axillaris HOM05D000312 ORTHO05D000221 7.7e-06 54.3 45 60.0


User provided reference genes

Program Settings