Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen01g046670 Solanum pennellii HOM05D005359 ORTHO05D006431 6.6e-243 843.6 417 100.0
PGSC0003DMG400023758 Solanum tuberosum HOM05D005359 ORTHO05D006431 1.6e-228 795.8 417 94.7
Solyc01g104230.4 Solanum lycopersicum HOM05D005359 ORTHO05D006431 3.3e-202 708.4 354 99.2
CAN.G1577.14 Capsicum annuum HOM05D005359 ORTHO05D006431 9.7e-194 680.2 418 80.6
Nitab4.5_0007420g0030 Nicotiana tabacum HOM05D005359 ORTHO05D006431 4.4e-186 654.8 420 77.9
Peaxi162Scf00011g00352 Petunia axillaris HOM05D005359 ORTHO05D006431 2.1e-180 636.0 420 76.0
Nitab4.5_0002245g0060 Nicotiana tabacum HOM05D005359 ORTHO05D006431 4.2e-173 611.7 420 73.8
Cc02_g22460 Coffea canephora HOM05D005359 ORTHO05D006431 6.8e-163 577.8 421 69.6
MSTRG.5231 Avicennia marina HOM05D005359 ORTHO05D006431 9.8e-162 573.9 418 68.7
Dinv19364 Davidia involucrata HOM05D005359 ORTHO05D006431 3.7e-161 572.0 421 69.4
Lj5A252T45 Lonicera japonica HOM05D005359 ORTHO05D006431 1.8e-160 569.7 421 68.6
Dinv24279 Davidia involucrata HOM05D005359 ORTHO05D006431 2.7e-159 565.8 421 69.4
SalBow6G6401 Salvia bowleyana HOM05D005359 ORTHO05D006431 5.0e-158 561.6 421 68.2
CSS0002632 Camellia sinensis var. sinensis HOM05D005359 ORTHO05D006431 2.5e-157 559.3 421 68.4
Oeu008891.1 Olea europaea HOM05D005359 ORTHO05D006431 5.6e-157 558.1 421 67.5
Ciclev10001293m.g Citrus clementina HOM05D005359 ORTHO05D006431 1.6e-156 556.6 421 68.4
CSS0043414 Camellia sinensis var. sinensis HOM05D005359 ORTHO05D006431 3.6e-156 555.4 421 67.9
Manes.07G015400 Manihot esculenta HOM05D005359 ORTHO05D006431 8.0e-156 554.3 421 67.9
RcHm_v2.0_Chr7g0222501 Rosa chinensis HOM05D005359 ORTHO05D006431 3.0e-155 552.4 421 66.3
Rhsim11G0129700 Rhododendron simsii HOM05D005359 ORTHO05D006431 5.2e-155 551.6 421 67.5
TWI14G1253 Tripterygium wilfordii HOM05D005359 ORTHO05D006431 6.8e-155 551.2 421 65.6
Sed0010360 Sechium edule HOM05D005359 ORTHO05D006431 1.7e-153 546.6 421 67.0
Migut.N01041 Erythranthe guttata HOM05D005359 ORTHO05D006431 4.9e-153 545.0 421 66.5
Eucgr.I02722 Eucalyptus grandis HOM05D005359 ORTHO05D006431 6.4e-153 544.7 421 64.1
Prupe.1G568000 Prunus persica HOM05D005359 ORTHO05D006431 6.4e-153 544.7 421 66.0
Haze_01666 Corylus avellana HOM05D005359 ORTHO05D006431 2.4e-152 542.7 419 65.9
ClCG09G014240 Citrullus lanatus HOM05D005359 ORTHO05D006431 4.1e-152 542.0 421 66.3
FAN08G1144 Fragaria x ananassa HOM05D005359 ORTHO05D006431 7.0e-152 541.2 421 65.6
TWI23G0911 Tripterygium wilfordii HOM05D005359 ORTHO05D006431 7.0e-152 541.2 421 64.8
vmacro01763 Vaccinium macrocarpon HOM05D005359 ORTHO05D006431 1.2e-151 540.4 421 66.0
PGR042G0198 Punica granatum HOM05D005359 ORTHO05D006431 4.6e-151 538.5 421 64.8
CANSAT11G0924 Cannabis sativa HOM05D005359 ORTHO05D006431 5.9e-151 538.1 421 64.4
CiPaw.06G147600 Carya illinoinensis HOM05D005359 ORTHO05D006431 7.8e-151 537.7 421 64.6
FvH4_5g29550 Fragaria vesca HOM05D005359 ORTHO05D006431 7.8e-151 537.7 421 65.3
MD15G1422700 Malus domestica HOM05D005359 ORTHO05D006431 1.3e-150 537.0 421 64.8
QL08p043348 Quercus lobata HOM05D005359 ORTHO05D006431 2.3e-150 536.2 420 65.2
FAN18G3183 Fragaria x ananassa HOM05D005359 ORTHO05D006431 3.0e-150 535.8 421 65.1
CANSAT11G2649 Cannabis sativa HOM05D005359 ORTHO05D006431 3.9e-150 535.4 422 64.2
Cfa005525 Carpinus fangiana HOM05D005359 ORTHO05D006431 3.9e-150 535.4 419 64.7
Sabra01G0162800 Salix brachista HOM05D005359 ORTHO05D006431 6.6e-150 534.6 421 64.8
Sabra03G0010900 Salix brachista HOM05D005359 ORTHO05D006431 6.6e-150 534.6 421 65.1
Hund05788 Selenicereus undatus HOM05D005359 ORTHO05D006431 8.6e-150 534.3 424 63.9
TAR376G0200 Trochodendron aralioides HOM05D005359 ORTHO05D006431 1.1e-149 533.9 421 65.1
ECA234G2063 Erigeron canadensis HOM05D005359 ORTHO05D006431 1.9e-149 533.1 421 63.9
Potri.003G019400 Populus trichocarpa HOM05D005359 ORTHO05D006431 2.5e-149 532.7 421 64.6
DCAR_013987 Daucus carota HOM05D005359 ORTHO05D006431 4.3e-149 531.9 420 64.0
SGA_v2.0_scaffold292G47368 Striga asiatica HOM05D005359 ORTHO05D006431 4.3e-149 531.9 412 66.3
Potri.001G210800 Populus trichocarpa HOM05D005359 ORTHO05D006431 7.3e-149 531.2 421 65.3
Gohir.D01G169300 Gossypium hirsutum HOM05D005359 ORTHO05D006431 9.5e-149 530.8 421 64.8
Gorai.002G210900 Gossypium raimondii HOM05D005359 ORTHO05D006431 9.5e-149 530.8 421 64.8
Gohir.A01G178400 Gossypium hirsutum HOM05D005359 ORTHO05D006431 1.2e-148 530.4 421 64.8
Lsat_1_v5_gn_5_109981 Lactuca sativa HOM05D005359 ORTHO05D006431 1.6e-148 530.0 420 64.5
Glyma.08G127900 Glycine max HOM05D005359 ORTHO05D006431 2.1e-148 529.6 422 64.9
FAN13G1157 Fragaria x ananassa HOM05D005359 ORTHO05D006431 2.8e-148 529.3 421 64.4
Glyma.15G046900 Glycine max HOM05D005359 ORTHO05D006431 3.6e-148 528.9 422 64.9
Psat2g122240 Pisum sativum HOM05D005359 ORTHO05D006431 6.2e-148 528.1 421 62.2
Thecc.02G038700 Theobroma cacao HOM05D005359 ORTHO05D006431 6.2e-148 528.1 421 64.8
Medtr2g007220 Medicago truncatula HOM05D005359 ORTHO05D006431 8.0e-148 527.7 421 62.9
Phvul.002G250300 Phaseolus vulgaris HOM05D005359 ORTHO05D006431 8.0e-148 527.7 422 64.9
TAR628G1654 Trochodendron aralioides HOM05D005359 ORTHO05D006431 1.0e-147 527.3 421 64.1
AUR62002965 Chenopodium quinoa HOM05D005359 ORTHO05D006431 1.4e-147 526.9 425 63.1
MELO3C014388.2 Cucumis melo HOM05D005359 ORTHO05D006431 1.4e-147 526.9 418 64.1
TPR.G2126 Trifolium pratense HOM05D005359 ORTHO05D006431 1.4e-147 526.9 421 62.0
AUR62007773 Chenopodium quinoa HOM05D005359 ORTHO05D006431 1.8e-147 526.6 425 62.8
CsaV3_6G037270 Cucumis sativus L. HOM05D005359 ORTHO05D006431 1.8e-147 526.6 421 63.9
VMungo0251G3193 Vigna mungo HOM05D005359 ORTHO05D006431 2.3e-147 526.2 421 64.6
HanXRQChr10g0289981 Helianthus annuus HOM05D005359 ORTHO05D006431 3.1e-147 525.8 421 62.7
Lj6g0011599 Lotus japonicus HOM05D005359 ORTHO05D006431 3.1e-147 525.8 420 62.9
MD08G1228700 Malus domestica HOM05D005359 ORTHO05D006431 4.0e-147 525.4 404 66.3
COL.COLO4_17869 Corchorus olitorius HOM05D005359 ORTHO05D006431 6.8e-147 524.6 421 64.6
unitig_26.g9020 Utricularia gibba HOM05D005359 ORTHO05D006431 6.8e-147 524.6 420 65.0
Glyma.05G169600 Glycine max HOM05D005359 ORTHO05D006431 8.9e-147 524.2 422 64.5
Glyma.08G185900 Glycine max HOM05D005359 ORTHO05D006431 8.9e-147 524.2 420 63.6
Nn5g28206 Nelumbo nucifera HOM05D005359 ORTHO05D006431 8.9e-147 524.2 421 64.1
Gorai.008G042100 Gossypium raimondii HOM05D005359 ORTHO05D006431 1.5e-146 523.5 421 64.1
EL10Ac6g14556 Beta vulgaris HOM05D005359 ORTHO05D006431 4.4e-146 521.9 425 63.1
Duzib052G1228 Durio zibethinus HOM05D005359 ORTHO05D006431 4.4e-146 521.9 421 64.6
HanXRQChr16g0514561 Helianthus annuus HOM05D005359 ORTHO05D006431 5.8e-146 521.5 421 63.2
Cpa.g.sc113.63 Carica papaya HOM05D005359 ORTHO05D006431 9.8e-146 520.8 421 63.4
VMungo0540G0616 Vigna mungo HOM05D005359 ORTHO05D006431 4.9e-145 518.5 421 62.2
Gohir.D12G040400 Gossypium hirsutum HOM05D005359 ORTHO05D006431 8.3e-145 517.7 421 63.4
Gohir.A12G031900 Gossypium hirsutum HOM05D005359 ORTHO05D006431 1.1e-144 517.3 421 62.9
arahy.Tifrunner.gnm1.ann1.8TZ9EP Arachis hypogaea HOM05D005359 ORTHO05D006431 3.2e-144 515.8 422 63.3
arahy.Tifrunner.gnm1.ann1.HK0KDN Arachis hypogaea HOM05D005359 ORTHO05D006431 3.2e-144 515.8 422 63.3
Ca_00078_v3 Cicer arietinum L. HOM05D005359 ORTHO05D006431 9.2e-144 514.2 418 62.7
DCAR_031890 Daucus carota HOM05D005359 ORTHO05D006431 3.5e-143 512.3 417 62.8
Phvul.006G214300 Phaseolus vulgaris HOM05D005359 ORTHO05D006431 2.3e-142 509.6 422 61.4
HanXRQChr06g0169581 Helianthus annuus HOM05D005359 ORTHO05D006431 3.9e-142 508.8 421 61.3
Sc16g0001650 Simmondsia chinensis HOM05D005359 ORTHO05D006431 1.1e-141 507.3 425 63.1
Lj4g0002358 Lotus japonicus HOM05D005359 ORTHO05D006431 2.5e-141 506.1 426 60.6
THA.LOC104809588 Tarenaya hassleriana HOM05D005359 ORTHO05D006431 3.1e-139 499.2 419 61.3
Thhalv10007703m.g Eutrema salsugineum HOM05D005359 ORTHO05D006431 6.4e-137 491.5 418 59.6
GSVIVG01022967001 Vitis vinifera HOM05D005359 ORTHO05D006431 3.2e-136 489.2 423 61.7
THA.LOC104819321 Tarenaya hassleriana HOM05D005359 ORTHO05D006431 2.1e-135 486.5 421 59.6
CiPaw.05G044000 Carya illinoinensis HOM05D005359 ORTHO05D006431 4.6e-135 485.3 421 59.6
CARHR011000 Cardamine hirsuta HOM05D005359 ORTHO05D006431 1.3e-134 483.8 420 58.8
Lalb_Chr20g0123431 Lupinus albus HOM05D005359 ORTHO05D006431 5.1e-134 481.9 421 58.9
AT1G10780 Arabidopsis thaliana HOM05D005359 ORTHO05D006431 8.6e-134 481.1 420 59.0
Aqoxy5G02275 Aquilegia oxysepala HOM05D005359 ORTHO05D006431 1.5e-133 480.3 423 58.2
MBI06_g20718_MAGBIO Magnolia biondii HOM05D005359 ORTHO05D006431 3.3e-133 479.2 419 56.6
Aa31LG1G4050 Aethionema arabicum HOM05D005359 ORTHO05D006431 9.5e-133 477.6 420 59.3
AL1G21710 Arabidopsis lyrata HOM05D005359 ORTHO05D006431 4.0e-131 472.2 420 58.8
Carub.0001s1033 Capsella rubella HOM05D005359 ORTHO05D006431 5.2e-131 471.9 420 57.4
Sp1g09480 Schrenkiella parvula HOM05D005359 ORTHO05D006431 2.6e-130 469.5 420 57.9
Ah.03g138120 Amaranthus hybridus HOM05D005359 ORTHO05D006431 1.1e-128 464.2 425 56.0
A09p64680 Brassica napus HOM05D005359 ORTHO05D006431 3.2e-128 462.6 421 57.2
ATR0193G009 Amborella trichopoda HOM05D005359 ORTHO05D006431 4.1e-128 462.2 419 56.1
BraA09t41824Z Brassica rapa HOM05D005359 ORTHO05D006431 4.1e-128 462.2 420 57.1
BolC8t52390H Brassica oleracea HOM05D005359 ORTHO05D006431 7.1e-128 461.5 420 57.1
C08p48500 Brassica napus HOM05D005359 ORTHO05D006431 1.6e-127 460.3 420 56.9
Os09g0454300 Oryza sativa ssp. japonica HOM05D005359 ORTHO05D006431 1.6e-127 460.3 419 54.4
ECA236G4790 Erigeron canadensis HOM05D005359 ORTHO05D006431 1.3e-126 457.2 379 61.5
Lalb_Chr07g0185731 Lupinus albus HOM05D005359 ORTHO05D006431 1.2e-124 450.7 421 53.9
Sed0018525 Sechium edule HOM05D005359 ORTHO05D006431 2.8e-124 449.5 420 55.2
Zm00001eb176520 Zea mays HOM05D005359 ORTHO05D006431 1.4e-120 437.2 423 53.0
Zm00001eb100430 Zea mays HOM05D005359 ORTHO05D006431 1.9e-120 436.8 402 54.0
Zm00001eb037840 Zea mays HOM05D005359 ORTHO05D006431 3.6e-116 422.5 423 51.8
Hma1.2p1_0217F.1_g092010 Hydrangea macrophylla HOM05D005359 ORTHO05D006431 2.7e-103 379.8 251 74.5
Mapoly0113s0005 Marchantia polymorpha HOM05D005359 ORTHO05D006431 3.0e-102 376.3 402 48.8
Os08g0469500 Oryza sativa ssp. japonica HOM05D005359 ORTHO05D006431 7.4e-101 371.7 420 47.9
Lsat_1_v5_gn_4_48740 Lactuca sativa HOM05D005359 ORTHO05D006431 2.7e-95 353.2 363 52.9
Thecc.02G038500 Theobroma cacao HOM05D005359 ORTHO05D006431 8.2e-92 341.7 282 60.6
SMO169G0280 Selaginella moellendorffii HOM05D005359 ORTHO05D006431 1.4e-83 314.3 407 43.2
AagrBONN_evm.TU.Sc2ySwM_117.2184 Anthoceros agrestis HOM05D005359 ORTHO05D006431 6.9e-83 312.0 374 44.9
Oeu033126.1 Olea europaea HOM05D005359 ORTHO05D006431 1.1e-80 304.7 305 55.1
HPP92_010977 Vanilla planifolia HOM05D005359 ORTHO05D006431 2.6e-77 293.5 302 51.3
CDE11G1073 Ceratophyllum demersum HOM05D005359 ORTHO05D006431 1.5e-64 251.1 302 46.0
Nn1g08733 Nelumbo nucifera HOM05D005359 ORTHO05D006431 2.3e-62 243.8 249 52.6
arahy.Tifrunner.gnm1.ann1.3FYK03 Arachis hypogaea HOM05D005359 ORTHO05D006431 4.2e-56 223.0 266 47.7
Atru.chr6.646 Acer truncatum HOM05D005359 ORTHO05D006431 1.8e-46 191.0 128 71.9
BcaC05g24954 Brassica carinata HOM05D005359 ORTHO05D006431 1.7e-41 174.5 161 55.9
Dinv24276 Davidia involucrata HOM05D005359 ORTHO05D006431 1.4e-35 154.8 132 62.9
arahy.Tifrunner.gnm1.ann1.BYQ4G2 Arachis hypogaea HOM05D005359 ORTHO05D006431 1.5e-29 134.8 99 69.7
arahy.Tifrunner.gnm1.ann1.94J17Q Arachis hypogaea HOM05D005359 ORTHO05D006431 5.8e-29 132.9 91 71.4
arahy.Tifrunner.gnm1.ann1.B308TG Arachis hypogaea HOM05D005359 ORTHO05D006431 1.9e-24 117.9 70 78.6
arahy.Tifrunner.gnm1.ann1.E0G9L5 Arachis hypogaea HOM05D005359 ORTHO05D006431 1.2e-23 115.2 74 74.3
arahy.Tifrunner.gnm1.ann1.F717DE Arachis hypogaea HOM05D005359 ORTHO05D006431 6.2e-23 112.8 70 77.1
arahy.Tifrunner.gnm1.ann1.HDLM7U Arachis hypogaea HOM05D005359 ORTHO05D006431 8.9e-22 109.0 70 75.7
arahy.Tifrunner.gnm1.ann1.X0Q2J1 Arachis hypogaea HOM05D005359 ORTHO05D006431 8.9e-22 109.0 70 75.7
Oeu056678.1 Olea europaea HOM05D005359 ORTHO05D006431 9.2e-19 99.0 79 59.5
MSTRG.27843 Avicennia marina HOM05D005359 ORTHO05D006431 3.3e-16 90.5 106 49.1
Gohir.D07G113900 Gossypium hirsutum HOM05D003488 ORTHO05D004214 4.6e-10 70.1 361 24.7
Gorai.001G122200 Gossypium raimondii HOM05D003488 ORTHO05D004214 4.6e-10 70.1 361 24.7
COL.COLO4_19885 Corchorus olitorius HOM05D003488 ORTHO05D004214 6.0e-10 69.7 356 24.4
Gohir.A07G110300 Gossypium hirsutum HOM05D003488 ORTHO05D004214 6.0e-10 69.7 361 24.7
Prupe.7G111200 Prunus persica HOM05D003488 ORTHO05D004214 7.8e-10 69.3 313 24.3
CSS0019661 Camellia sinensis var. sinensis HOM05D003488 ORTHO05D004214 1.0e-09 68.9 303 25.1
arahy.Tifrunner.gnm1.ann1.0J6PHG Arachis hypogaea HOM05D003488 ORTHO05D004214 3.9e-09 67.0 361 23.8
arahy.Tifrunner.gnm1.ann1.Q9WWUM Arachis hypogaea HOM05D003488 ORTHO05D004214 3.9e-09 67.0 361 23.8
PSO170G6786 Papaver somniferum HOM05D000051 ORTHO05D000015 3.9e-09 67.0 236 28.8
Actinidia31274 Actinidia chinensis HOM05D003488 ORTHO05D004214 6.6e-09 66.2 303 24.1
MBI17_g08366_MAGBIO Magnolia biondii HOM05D003488 ORTHO05D004214 6.6e-09 66.2 303 24.1
HanXRQChr13g0397431 Helianthus annuus HOM05D003488 ORTHO05D004214 8.7e-09 65.9 315 24.8
Cc06_g05690 Coffea canephora HOM05D003488 ORTHO05D004214 1.1e-08 65.5 327 22.9
TAR633G2222 Trochodendron aralioides HOM05D003488 ORTHO05D004214 1.1e-08 65.5 303 24.4
Medtr7g104490 Medicago truncatula HOM05D003488 ORTHO05D004214 4.3e-08 63.5 338 24.0
Duzib168G1363 Durio zibethinus HOM05D003488 ORTHO05D004214 5.6e-08 63.2 308 24.7
Cfa016600 Carpinus fangiana HOM05D003488 ORTHO05D004214 9.6e-08 62.4 346 22.8
PGR102G1638 Punica granatum HOM05D003488 ORTHO05D004214 9.6e-08 62.4 285 22.8
Sabra04G0137300 Salix brachista HOM05D003488 ORTHO05D004214 9.6e-08 62.4 303 24.1
AL2G25690 Arabidopsis lyrata HOM05D003488 ORTHO05D004214 1.6e-07 61.6 315 25.1
Ah.15g095780 Amaranthus hybridus HOM05D003488 ORTHO05D004214 2.1e-07 61.2 356 23.9
Gohir.D09G095200 Gossypium hirsutum HOM05D003488 ORTHO05D004214 2.1e-07 61.2 314 23.9
Glyma.19G194600 Glycine max HOM05D003488 ORTHO05D004214 2.8e-07 60.8 339 23.3
PSO339G0354 Papaver somniferum HOM05D003488 ORTHO05D004214 2.8e-07 60.8 366 22.1
Rhsim03G0075900 Rhododendron simsii HOM05D003488 ORTHO05D004214 2.8e-07 60.8 321 23.4
Gorai.006G111900 Gossypium raimondii HOM05D003488 ORTHO05D004214 6.2e-07 59.7 314 23.6
Potri.004G203300 Populus trichocarpa HOM05D003488 ORTHO05D004214 6.2e-07 59.7 303 23.8


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