Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen01g046470 Solanum pennellii HOM05D006894 ORTHO05D008724 2.5e-234 815.1 414 100.0
Solyc01g104060.3 Solanum lycopersicum HOM05D006894 ORTHO05D008724 1.4e-229 799.3 414 98.6
PGSC0003DMG400023767 Solanum tuberosum HOM05D006894 ORTHO05D008724 7.3e-210 733.8 435 88.7
CAN.G798.8 Capsicum annuum HOM05D006894 ORTHO05D008724 3.4e-207 724.9 416 89.2
Nitab4.5_0000816g0080 Nicotiana tabacum HOM05D006894 ORTHO05D008724 3.9e-203 711.4 418 86.6
Nitab4.5_0010336g0030 Nicotiana tabacum HOM05D006894 ORTHO05D008724 1.3e-198 696.4 411 87.1
Peaxi162Scf00017g02640 Petunia axillaris HOM05D006894 ORTHO05D008724 3.7e-185 651.7 348 92.5
Peaxi162Scf00011g00531 Petunia axillaris HOM05D006894 ORTHO05D008724 2.7e-180 635.6 380 84.7
QL02p099211 Quercus lobata HOM05D006894 ORTHO05D008724 3.0e-171 605.5 380 74.5
Cfa005507 Carpinus fangiana HOM05D006894 ORTHO05D008724 5.9e-167 591.3 364 77.2
Thecc.02G114400 Theobroma cacao HOM05D006894 ORTHO05D008724 2.8e-161 572.4 394 69.3
Lsat_1_v5_gn_9_118621 Lactuca sativa HOM05D006894 ORTHO05D008724 3.7e-161 572.0 369 75.1
Ciclev10001270m.g Citrus clementina HOM05D006894 ORTHO05D008724 4.8e-161 571.6 372 73.1
VMungo0251G0921 Vigna mungo HOM05D006894 ORTHO05D008724 4.8e-161 571.6 383 71.5
Atru.chr6.599 Acer truncatum HOM05D006894 ORTHO05D008724 6.3e-161 571.2 375 72.3
MD08G1235500 Malus domestica HOM05D006894 ORTHO05D008724 6.3e-161 571.2 365 73.7
GSVIVG01022874001 Vitis vinifera HOM05D006894 ORTHO05D008724 8.2e-161 570.9 408 70.1
Atru.chr6.614 Acer truncatum HOM05D006894 ORTHO05D008724 1.1e-160 570.5 375 72.3
CANSAT11G1074 Cannabis sativa HOM05D006894 ORTHO05D008724 1.1e-160 570.5 402 69.7
Gohir.D02G214600 Gossypium hirsutum HOM05D006894 ORTHO05D008724 1.8e-160 569.7 384 70.3
Gorai.005G242400 Gossypium raimondii HOM05D006894 ORTHO05D008724 1.8e-160 569.7 384 70.3
Gohir.A03G193500 Gossypium hirsutum HOM05D006894 ORTHO05D008724 9.1e-160 567.4 384 69.5
Oeu027798.1 Olea europaea HOM05D006894 ORTHO05D008724 9.1e-160 567.4 416 69.0
Glyma.05G168900 Glycine max HOM05D006894 ORTHO05D008724 1.2e-159 567.0 376 72.1
TAR628G1558 Trochodendron aralioides HOM05D006894 ORTHO05D008724 2.0e-159 566.2 401 70.1
CiPaw.05G048800 Carya illinoinensis HOM05D006894 ORTHO05D008724 2.6e-159 565.8 382 70.4
RcHm_v2.0_Chr7g0221781 Rosa chinensis HOM05D006894 ORTHO05D008724 4.5e-159 565.1 393 71.0
Phvul.002G249600 Phaseolus vulgaris HOM05D006894 ORTHO05D008724 1.0e-158 563.9 375 72.0
HanXRQChr09g0249011 Helianthus annuus HOM05D006894 ORTHO05D008724 1.3e-158 563.5 388 70.4
Prupe.1G571400 Prunus persica HOM05D006894 ORTHO05D008724 3.8e-158 562.0 359 74.1
Duzib248G0689 Durio zibethinus HOM05D006894 ORTHO05D008724 1.1e-157 560.5 391 69.3
TPR.G23092 Trifolium pratense HOM05D006894 ORTHO05D008724 1.1e-157 560.5 411 67.6
FAN08G3638 Fragaria x ananassa HOM05D006894 ORTHO05D008724 1.5e-157 560.1 379 71.8
arahy.Tifrunner.gnm1.ann1.7VS6FJ Arachis hypogaea HOM05D006894 ORTHO05D008724 1.9e-157 559.7 369 72.1
arahy.Tifrunner.gnm1.ann1.NZQI89 Arachis hypogaea HOM05D006894 ORTHO05D008724 3.2e-157 558.9 369 72.1
Lj9A304G82 Lonicera japonica HOM05D006894 ORTHO05D008724 1.2e-156 557.0 406 68.2
TWI14G1412 Tripterygium wilfordii HOM05D006894 ORTHO05D008724 1.2e-156 557.0 375 70.1
COL.COLO4_11781 Corchorus olitorius HOM05D006894 ORTHO05D008724 4.7e-156 555.1 415 67.2
Psat7g062040 Pisum sativum HOM05D006894 ORTHO05D008724 1.0e-155 553.9 376 71.5
Migut.B00823 Erythranthe guttata HOM05D006894 ORTHO05D008724 2.3e-155 552.7 367 74.1
Lalb_Chr12g0204471 Lupinus albus HOM05D006894 ORTHO05D008724 3.0e-155 552.4 374 70.6
Nn1g08851 Nelumbo nucifera HOM05D006894 ORTHO05D008724 5.2e-155 551.6 405 64.9
Medtr8g088790 Medicago truncatula HOM05D006894 ORTHO05D008724 1.1e-154 550.4 376 69.9
PSO528G0189 Papaver somniferum HOM05D006894 ORTHO05D008724 1.5e-154 550.1 368 72.3
CsaV3_6G037480 Cucumis sativus L. HOM05D006894 ORTHO05D008724 2.0e-154 549.7 363 72.7
Eucgr.G00568 Eucalyptus grandis HOM05D006894 ORTHO05D008724 2.6e-154 549.3 397 67.0
Ca_17824_v3 Cicer arietinum L. HOM05D006894 ORTHO05D008724 3.3e-154 548.9 360 73.1
Manes.07G017700 Manihot esculenta HOM05D006894 ORTHO05D008724 5.7e-154 548.1 364 72.3
PSO170G1552 Papaver somniferum HOM05D006894 ORTHO05D008724 7.5e-154 547.7 384 69.5
ECA240G3758 Erigeron canadensis HOM05D006894 ORTHO05D008724 1.1e-152 543.9 376 71.0
AT1G60990 Arabidopsis thaliana HOM05D006894 ORTHO05D008724 9.1e-152 540.8 368 70.1
Carub.0002s0422 Capsella rubella HOM05D006894 ORTHO05D008724 1.6e-151 540.0 368 70.4
Cc02_g22630 Coffea canephora HOM05D006894 ORTHO05D008724 1.6e-151 540.0 383 71.0
Sp2g03530 Schrenkiella parvula HOM05D006894 ORTHO05D008724 2.0e-151 539.7 408 63.7
CARHR052050 Cardamine hirsuta HOM05D006894 ORTHO05D008724 3.5e-151 538.9 376 68.4
Aqoxy6G00238 Aquilegia oxysepala HOM05D006894 ORTHO05D008724 1.3e-150 537.0 364 70.3
Thhalv10023478m.g Eutrema salsugineum HOM05D006894 ORTHO05D008724 1.7e-150 536.6 366 69.4
AL2G15470 Arabidopsis lyrata HOM05D006894 ORTHO05D008724 3.8e-150 535.4 368 69.6
A01p29780 Brassica napus HOM05D006894 ORTHO05D008724 8.0e-148 527.7 360 69.2
C01p37610 Brassica napus HOM05D006894 ORTHO05D008724 1.4e-147 526.9 360 69.4
vmacro01754 Vaccinium macrocarpon HOM05D006894 ORTHO05D008724 1.8e-147 526.6 443 61.4
THA.LOC104809620 Tarenaya hassleriana HOM05D006894 ORTHO05D008724 2.3e-147 526.2 407 63.4
BcaC09g49347 Brassica carinata HOM05D006894 ORTHO05D008724 3.0e-147 525.8 360 68.9
MSTRG.20303 Avicennia marina HOM05D006894 ORTHO05D008724 6.8e-147 524.6 373 69.7
DCAR_006702 Daucus carota HOM05D006894 ORTHO05D008724 1.5e-146 523.5 381 65.9
Lj4g0002387 Lotus japonicus HOM05D006894 ORTHO05D008724 7.5e-146 521.2 340 72.4
Aa31LG2G9600 Aethionema arabicum HOM05D006894 ORTHO05D008724 4.8e-145 518.5 376 66.0
ATR0665G083 Amborella trichopoda HOM05D006894 ORTHO05D008724 3.5e-143 512.3 371 67.4
FAN18G4164 Fragaria x ananassa HOM05D006894 ORTHO05D008724 7.7e-143 511.1 408 64.0
Sed0001229 Sechium edule HOM05D006894 ORTHO05D008724 3.8e-142 508.8 341 71.6
CDE08G1218 Ceratophyllum demersum HOM05D006894 ORTHO05D008724 4.7e-140 501.9 366 66.1
FvH4_5g29120 Fragaria vesca HOM05D006894 ORTHO05D008724 6.1e-140 501.5 371 67.1
Sc15g0002580 Simmondsia chinensis HOM05D006894 ORTHO05D008724 1.8e-139 500.0 370 65.1
PGR042G0448 Punica granatum HOM05D006894 ORTHO05D008724 1.3e-137 493.8 373 66.2
Actinidia39033 Actinidia chinensis HOM05D006894 ORTHO05D008724 2.2e-137 493.0 345 69.9
Rhsim11G0128300 Rhododendron simsii HOM05D006894 ORTHO05D008724 8.3e-137 491.1 387 63.8
FAN04G0479 Fragaria x ananassa HOM05D006894 ORTHO05D008724 1.8e-136 490.0 371 66.0
MBI06_g01072_MAGBIO Magnolia biondii HOM05D006894 ORTHO05D008724 6.6e-134 481.5 512 51.6
SEGI_07604 Sequoiadendron giganteum HOM05D006894 ORTHO05D008724 4.0e-131 472.2 368 62.5
BcaB04g20304 Brassica carinata HOM05D006894 ORTHO05D008724 7.5e-130 468.0 360 63.1
Dinv19376 Davidia involucrata HOM05D006894 ORTHO05D008724 3.2e-128 462.6 333 71.2
Actinidia30531 Actinidia chinensis HOM05D006894 ORTHO05D008724 3.5e-127 459.1 349 65.3
Mapoly0039s0108 Marchantia polymorpha HOM05D006894 ORTHO05D008724 6.0e-119 431.8 364 56.6
AagrBONN_evm.TU.Sc2ySwM_344.1590 Anthoceros agrestis HOM05D006894 ORTHO05D007218 6.8e-115 418.3 347 58.5
Haze_01731 Corylus avellana HOM05D006894 ORTHO05D008724 5.8e-114 415.2 432 52.5
MELO3C014368.2 Cucumis melo HOM05D006894 ORTHO05D008724 1.7e-113 413.7 403 54.3
Pp3c9_20800 Physcomitrium patens HOM05D006894 ORTHO05D008724 8.6e-110 401.4 360 55.3
SMO119G0367 Selaginella moellendorffii HOM05D006894 ORTHO05D008724 3.1e-107 392.9 346 55.5
CSS0024184 Camellia sinensis var. sinensis HOM05D006894 ORTHO05D008724 7.1e-104 381.7 364 55.8
FAN13G2283 Fragaria x ananassa HOM05D006894 ORTHO05D008724 9.2e-104 381.3 371 55.3
CBR_g30837 Chara braunii HOM05D000019 ORTHO05D000048 6.6e-102 375.2 397 48.9
BolC1t03726H Brassica oleracea HOM05D006894 ORTHO05D008724 4.6e-95 352.4 234 70.9
BraA01t03106Z Brassica rapa HOM05D006894 ORTHO05D008724 6.0e-95 352.1 234 70.9
unitig_749.g14128 Utricularia gibba HOM05D006894 ORTHO05D008724 1.0e-94 351.3 286 62.9
SEGI_10844 Sequoiadendron giganteum HOM05D006894 ORTHO05D008724 9.0e-83 311.6 325 51.1
Cre12.g552850 Chlamydomonas reinhardtii HOM05D006894 ORTHO05D008724 2.1e-68 263.8 376 39.9
Rhsim09G0048600 Rhododendron simsii HOM05D006894 ORTHO05D008724 2.0e-66 257.3 352 43.5
Cpa.g.sc30.18 Carica papaya HOM05D006894 ORTHO05D008724 1.1e-48 198.4 129 72.1
ClCG09G014030 Citrullus lanatus HOM05D006894 ORTHO05D008724 1.5e-45 188.0 125 68.0
Rhsim09G0016000 Rhododendron simsii HOM05D006894 ORTHO05D008724 2.6e-42 177.2 183 52.5
BcaB01g03502 Brassica carinata HOM05D006894 ORTHO05D008724 6.7e-38 162.5 148 57.4
BcaB05g23073 Brassica carinata HOM05D006894 ORTHO05D008724 4.8e-36 156.4 108 67.6
CAN.G798.10 Capsicum annuum HOM05D006894 ORTHO05D008724 3.7e-28 130.2 180 47.8
BcaB02g10691 Brassica carinata HOM05D000189 ORTHO05D000474 3.5e-26 123.6 178 42.1
Pp3c5_7230 Physcomitrium patens HOM05D006894 ORTHO05D008724 7.7e-26 122.5 185 42.2
ClCG09G014040 Citrullus lanatus HOM05D006894 ORTHO05D008724 1.3e-25 121.7 79 69.6
Cpa.g.sc30.19 Carica papaya HOM05D006894 ORTHO05D008724 3.8e-25 120.2 111 55.9
Solyc09g015460.3 Solanum lycopersicum HOM05D006894 ORTHO05D008724 1.6e-23 114.8 67 82.1
Duzib052G1224 Durio zibethinus HOM05D006894 ORTHO05D008724 5.2e-22 109.8 152 43.4
PRCOL_00004673 Prasinoderma coloniale HOM05D006894 ORTHO05D008724 8.8e-22 109.0 375 26.7
unitig_749.g14127 Utricularia gibba HOM05D006894 ORTHO05D008724 2.6e-21 107.5 76 68.4
ClCG09G014050 Citrullus lanatus HOM05D006894 ORTHO05D008724 2.0e-18 97.8 100 57.0
Glyma.08G127500 Glycine max HOM05D006894 ORTHO05D008724 3.5e-18 97.1 97 50.5
Cpa.g.sc3656.1 Carica papaya HOM05D006894 ORTHO05D008724 3.6e-15 87.0 62 67.7
Phvul.006G148700 Phaseolus vulgaris HOM05D004784 ORTHO05D005762 4.7e-15 86.7 334 26.3
Peaxi162Scf01350g00016 Petunia axillaris HOM05D006894 ORTHO05D008724 1.0e-14 85.5 53 75.5
CDE06G1775 Ceratophyllum demersum HOM05D006894 ORTHO05D008724 1.5e-08 65.1 88 40.9
CAN.G536.1 Capsicum annuum HOM05D006894 ORTHO05D000067 1.2e-07 62.0 32 84.4


User provided reference genes

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