Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen01g043220 Solanum pennellii HOM05D006406 ORTHO05D007883 2.5e-184 648.7 328 100.0
Solyc01g099700.3 Solanum lycopersicum HOM05D006406 ORTHO05D007883 5.7e-181 637.5 328 98.5
PGSC0003DMG400007542 Solanum tuberosum HOM05D006406 ORTHO05D007883 2.3e-158 562.4 296 92.9
CAN.G1459.10 Capsicum annuum HOM05D006406 ORTHO05D007883 5.5e-152 541.2 334 83.2
Nitab4.5_0003658g0090 Nicotiana tabacum HOM05D006406 ORTHO05D007883 7.5e-149 530.8 342 81.3
Peaxi162Scf00037g01125 Petunia axillaris HOM05D006406 ORTHO05D007883 9.8e-149 530.4 332 80.4
Nitab4.5_0003844g0020 Nicotiana tabacum HOM05D006406 ORTHO05D007883 1.0e-142 510.4 330 81.8
Oeu043348.1 Olea europaea HOM05D006406 ORTHO05D007883 3.7e-124 448.7 314 70.7
Lj9C146T2 Lonicera japonica HOM05D006406 ORTHO05D007883 1.7e-121 439.9 309 68.6
GSVIVG01031144001 Vitis vinifera HOM05D006406 ORTHO05D007883 2.3e-121 439.5 297 70.0
Cfa006628 Carpinus fangiana HOM05D006406 ORTHO05D007883 5.0e-121 438.3 341 63.3
Haze_04140 Corylus avellana HOM05D006406 ORTHO05D007883 1.1e-120 437.2 302 68.2
TAR633G0157 Trochodendron aralioides HOM05D006406 ORTHO05D007883 2.5e-120 436.0 324 66.0
Thecc.05G312900 Theobroma cacao HOM05D006406 ORTHO05D007883 3.3e-120 435.6 319 64.6
SalBow7G2778 Salvia bowleyana HOM05D006406 ORTHO05D007883 1.2e-119 433.7 290 70.0
Hma1.2p1_1212F.1_g267260 Hydrangea macrophylla HOM05D006406 ORTHO05D007883 2.1e-119 433.0 340 63.5
Aqoxy5G00730 Aquilegia oxysepala HOM05D006406 ORTHO05D007883 2.8e-119 432.6 321 65.1
COL.COLO4_10518 Corchorus olitorius HOM05D006406 ORTHO05D007883 6.2e-119 431.4 302 67.2
Duzib177G0190 Durio zibethinus HOM05D006406 ORTHO05D007883 8.1e-119 431.0 299 67.9
Manes.08G117600 Manihot esculenta HOM05D006406 ORTHO05D007883 1.1e-118 430.6 341 60.4
SGA_v2.0_scaffold172G38986 Striga asiatica HOM05D006406 ORTHO05D007883 1.8e-118 429.9 312 67.3
MD04G1200800 Malus domestica HOM05D006406 ORTHO05D007883 1.2e-117 427.2 304 67.4
CiPaw.08G161900 Carya illinoinensis HOM05D006406 ORTHO05D007883 2.6e-117 426.0 318 64.8
Sabra13G0015900 Salix brachista HOM05D006406 ORTHO05D007883 4.4e-117 425.2 346 61.0
Glyma.03G235700 Glycine max HOM05D006406 ORTHO05D007883 9.8e-117 424.1 334 62.9
vmacro04816 Vaccinium macrocarpon HOM05D006406 ORTHO05D007883 1.3e-116 423.7 355 61.1
Ciclev10001711m.g Citrus clementina HOM05D006406 ORTHO05D007883 2.2e-116 422.9 303 65.3
Cpa.g.sc48.95 Carica papaya HOM05D006406 ORTHO05D007883 2.9e-116 422.5 298 67.1
Sabra13G0020100 Salix brachista HOM05D006406 ORTHO05D007883 2.9e-116 422.5 346 60.4
Hund07096 Selenicereus undatus HOM05D006406 ORTHO05D007883 2.9e-116 422.5 299 67.6
QL03p020986 Quercus lobata HOM05D006406 ORTHO05D007883 3.7e-116 422.2 302 67.2
QL03p021882 Quercus lobata HOM05D006406 ORTHO05D007883 4.9e-116 421.8 304 66.8
Potri.013G017100 Populus trichocarpa HOM05D006406 ORTHO05D007883 1.1e-115 420.6 348 59.5
EL10Ac4g09916 Beta vulgaris HOM05D006406 ORTHO05D007883 2.4e-115 419.5 291 68.4
Gohir.A13G109200 Gossypium hirsutum HOM05D006406 ORTHO05D007883 4.1e-115 418.7 339 59.9
Rhsim07G0188300 Rhododendron simsii HOM05D006406 ORTHO05D007883 5.4e-115 418.3 297 67.3
MBI18_g46420_MAGBIO Magnolia biondii HOM05D006406 ORTHO05D007883 1.2e-114 417.2 339 61.9
Medtr7g112650 Medicago truncatula HOM05D006406 ORTHO05D007883 1.2e-114 417.2 319 62.4
Nn4g25830 Nelumbo nucifera HOM05D006406 ORTHO05D007883 1.2e-114 417.2 325 63.1
Gorai.013G125700 Gossypium raimondii HOM05D006406 ORTHO05D007883 1.6e-114 416.8 339 59.9
unitig_52.g17112 Utricularia gibba HOM05D006406 ORTHO05D007883 2.1e-114 416.4 336 61.9
Migut.N01744 Erythranthe guttata HOM05D006406 ORTHO05D007883 3.5e-114 415.6 310 66.1
RcHm_v2.0_Chr3g0455711 Rosa chinensis HOM05D006406 ORTHO05D007883 3.5e-114 415.6 302 64.9
Ca_05800_v3 Cicer arietinum L. HOM05D006406 ORTHO05D007883 4.6e-114 415.2 324 62.0
TPR.G33225 Trifolium pratense HOM05D006406 ORTHO05D007883 6.0e-114 414.8 326 62.9
Actinidia35561 Actinidia chinensis HOM05D006406 ORTHO05D007883 7.8e-114 414.5 347 61.4
Carub.0006s2486 Capsella rubella HOM05D006406 ORTHO05D007883 7.8e-114 414.5 321 61.1
TWI12G0288 Tripterygium wilfordii HOM05D006406 ORTHO05D007883 7.8e-114 414.5 293 68.9
CsaV3_1G038840 Cucumis sativus L. HOM05D006406 ORTHO05D007883 1.3e-113 413.7 317 61.8
Gohir.D13G112000 Gossypium hirsutum HOM05D006406 ORTHO05D007883 1.3e-113 413.7 309 63.8
Atru.chr2.29 Acer truncatum HOM05D006406 ORTHO05D007883 1.7e-113 413.3 298 65.8
Hund07097 Selenicereus undatus HOM05D006406 ORTHO05D007883 2.3e-113 412.9 286 68.5
Sc16g0008820 Simmondsia chinensis HOM05D006406 ORTHO05D007883 6.6e-113 411.4 323 62.2
Lalb_Chr18g0045761 Lupinus albus HOM05D006406 ORTHO05D007883 1.5e-112 410.2 335 60.3
Psat0s27g0120 Pisum sativum HOM05D006406 ORTHO05D007883 1.9e-112 409.8 315 63.8
PGR083G2713 Punica granatum HOM05D006406 ORTHO05D007883 1.9e-112 409.8 296 66.9
arahy.Tifrunner.gnm1.ann1.Q6XDLT Arachis hypogaea HOM05D006406 ORTHO05D007883 9.5e-112 407.5 310 62.3
Eucgr.B01914 Eucalyptus grandis HOM05D006406 ORTHO05D007883 1.2e-111 407.1 348 58.9
Phvul.006G089700 Phaseolus vulgaris HOM05D006406 ORTHO05D007883 1.2e-111 407.1 317 62.5
VMungo0540G0116 Vigna mungo HOM05D006406 ORTHO05D007883 1.2e-111 407.1 336 61.3
arahy.Tifrunner.gnm1.ann1.PP7FUY Arachis hypogaea HOM05D006406 ORTHO05D007883 2.8e-111 406.0 310 61.9
Sed0006495 Sechium edule HOM05D006406 ORTHO05D007883 2.8e-111 406.0 318 61.9
ClCG03G017120 Citrullus lanatus HOM05D006406 ORTHO05D007883 4.7e-111 405.2 294 63.6
Sp2g20880 Schrenkiella parvula HOM05D006406 ORTHO05D007883 4.0e-110 402.1 310 61.3
TWI36G0652 Tripterygium wilfordii HOM05D006406 ORTHO05D007883 6.8e-110 401.4 293 64.5
AL6G39250 Arabidopsis lyrata HOM05D006406 ORTHO05D007883 1.2e-109 400.6 313 60.1
CANSAT54G1062 Cannabis sativa HOM05D006406 ORTHO05D007883 2.0e-109 399.8 321 59.2
AT5G27710 Arabidopsis thaliana HOM05D006406 ORTHO05D007883 2.6e-109 399.4 314 61.5
Lj1g0022852 Lotus japonicus HOM05D006406 ORTHO05D007883 2.6e-109 399.4 308 62.0
Aa31LG11G9460 Aethionema arabicum HOM05D006406 ORTHO05D007883 5.8e-109 398.3 325 57.8
CSS0003718 Camellia sinensis var. sinensis HOM05D006406 ORTHO05D007883 4.9e-108 395.2 340 58.8
Thhalv10005730m.g Eutrema salsugineum HOM05D006406 ORTHO05D007883 8.4e-108 394.4 332 58.7
THA.LOC104818716 Tarenaya hassleriana HOM05D006406 ORTHO05D007883 6.0e-106 388.3 311 60.8
PSO210G1514 Papaver somniferum HOM05D006406 ORTHO05D007883 1.3e-105 387.1 322 60.2
Lsat_1_v5_gn_9_88181 Lactuca sativa HOM05D006406 ORTHO05D007883 3.0e-105 386.0 329 59.6
Prupe.6G320900 Prunus persica HOM05D006406 ORTHO05D007883 6.6e-105 384.8 333 58.3
FAN14G3705 Fragaria x ananassa HOM05D006406 ORTHO05D007883 8.6e-105 384.4 288 64.2
ECA236G2290 Erigeron canadensis HOM05D006406 ORTHO05D007883 9.6e-104 380.9 282 62.4
HanXRQChr11g0339311 Helianthus annuus HOM05D006406 ORTHO05D007883 1.6e-103 380.2 295 63.7
PSO210G1688 Papaver somniferum HOM05D006406 ORTHO05D007883 2.8e-103 379.4 322 59.0
AUR62000764 Chenopodium quinoa HOM05D006406 ORTHO05D007883 2.4e-102 376.3 286 64.7
A09p05410 Brassica napus HOM05D006406 ORTHO05D007883 1.2e-101 374.0 316 58.5
BraA09t36179Z Brassica rapa HOM05D006406 ORTHO05D007883 1.5e-101 373.6 316 58.5
BcaB04g19684 Brassica carinata HOM05D006406 ORTHO05D007883 3.4e-101 372.5 334 56.3
FAN05G5419 Fragaria x ananassa HOM05D006406 ORTHO05D007883 3.4e-101 372.5 285 62.8
Cc02_g34120 Coffea canephora HOM05D006406 ORTHO05D007883 6.4e-100 368.2 215 78.1
PGSC0003DMG400024710 Solanum tuberosum HOM05D006406 ORTHO05D007883 6.4e-100 368.2 224 89.7
Dinv30810 Davidia involucrata HOM05D006406 ORTHO05D007883 7.1e-99 364.8 250 69.2
CARHR186230 Cardamine hirsuta HOM05D006406 ORTHO05D007883 2.1e-98 363.2 287 59.6
Ah.06g189770 Amaranthus hybridus HOM05D006406 ORTHO05D007883 4.6e-98 362.1 274 63.9
BcaC04g23642 Brassica carinata HOM05D006406 ORTHO05D007883 4.6e-98 362.1 314 58.3
CDE11G0411 Ceratophyllum demersum HOM05D001335 ORTHO05D001184 4.6e-98 362.1 303 56.8
C09p05890 Brassica napus HOM05D006406 ORTHO05D007883 3.9e-97 359.0 315 58.4
BolC9t53515H Brassica oleracea HOM05D006406 ORTHO05D007883 3.9e-97 359.0 315 58.4
Os07g0673000 Oryza sativa ssp. japonica HOM05D006406 ORTHO05D007883 3.9e-97 359.0 264 61.0
AUR62005205 Chenopodium quinoa HOM05D006406 ORTHO05D007883 2.8e-95 352.8 302 58.9
DCAR_029393 Daucus carota HOM05D006406 ORTHO05D007883 5.3e-94 348.6 324 55.6
ATR0796G153 Amborella trichopoda HOM05D006406 ORTHO05D007883 7.9e-90 334.7 231 64.5
Glyma.19G233500 Glycine max HOM05D006406 ORTHO05D007883 1.5e-88 330.5 283 61.5
SEGI_05797 Sequoiadendron giganteum HOM05D006406 ORTHO05D007883 6.9e-86 321.6 295 52.9
FvH4_6g06560 Fragaria vesca HOM05D006406 ORTHO05D007883 3.0e-73 279.6 225 60.0
MELO3C015308.2 Cucumis melo HOM05D006406 ORTHO05D007883 7.4e-72 275.0 323 45.8
Pp3c6_26830 Physcomitrium patens HOM05D006406 ORTHO05D007883 5.0e-68 262.3 232 51.3
SMO172G0153 Selaginella moellendorffii HOM05D006406 ORTHO05D007883 7.2e-67 258.5 285 46.0
Hma1.2p1_1212F.1_g267270 Hydrangea macrophylla HOM05D006406 ORTHO05D007883 2.1e-66 256.9 226 59.7
Mapoly0054s0047 Marchantia polymorpha HOM05D006406 ORTHO05D007883 2.1e-66 256.9 300 43.3
SMO172G0232 Selaginella moellendorffii HOM05D006406 ORTHO05D007883 6.1e-66 255.4 282 46.1
Oeu043349.1 Olea europaea HOM05D006406 ORTHO05D007883 1.0e-65 254.6 200 65.5
Zm00001eb111280 Zea mays HOM05D006406 ORTHO05D007883 3.9e-65 252.7 209 56.5
HPP92_011843 Vanilla planifolia HOM05D006406 ORTHO05D007883 1.7e-60 237.3 295 44.1
CBR_g19246 Chara braunii HOM05D006406 ORTHO05D007883 2.2e-55 220.3 249 42.6
SMO198G0100 Selaginella moellendorffii HOM05D006406 ORTHO05D007883 1.1e-48 198.0 264 40.9
PSO421G0497 Papaver somniferum HOM05D006406 ORTHO05D007883 1.7e-47 194.1 298 38.3
arahy.Tifrunner.gnm1.ann1.AST3BR Arachis hypogaea HOM05D006406 ORTHO05D007883 4.2e-43 179.5 155 52.9
MSTRG.16393 Avicennia marina HOM05D006406 ORTHO05D007883 1.5e-35 154.5 153 57.5
AagrBONN_evm.TU.Sc2ySwM_362.2555 Anthoceros agrestis HOM05D006406 ORTHO05D007883 1.8e-30 137.5 114 54.4
FAN02G3513 Fragaria x ananassa HOM05D006406 ORTHO05D007883 2.4e-22 110.5 127 45.7
Lsat_1_v5_gn_5_186620 Lactuca sativa HOM05D006406 ORTHO05D007883 1.7e-15 87.8 131 39.7
BcaB07g32734 Brassica carinata HOM05D006406 ORTHO05D007883 1.1e-14 85.1 135 40.0
AL3G41450 Arabidopsis lyrata HOM05D000059 ORTHO05D000128 1.6e-10 71.2 41 73.2
Aqoxy601s001 Aquilegia oxysepala HOM05D006406 ORTHO05D007883 1.7e-07 61.2 33 78.8
Cre09.g392700 Chlamydomonas reinhardtii HOM05D006406 ORTHO05D007883 8.3e-07 58.9 95 40.0


User provided reference genes

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