Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen01g042090 Solanum pennellii HOM05D005370 ORTHO05D006659 4.3e-87 324.7 173 100.0
Sopen04g034560 Solanum pennellii HOM05D005370 ORTHO05D006659 1.0e-56 223.8 188 67.6
Nitab4.5_0001423g0070 Nicotiana tabacum HOM05D005370 ORTHO05D006659 1.8e-56 223.0 223 59.6
Peaxi162Scf00434g00622 Petunia axillaris HOM05D005370 ORTHO05D006659 8.7e-56 220.7 173 72.3
Solyc04g080950.3 Solanum lycopersicum HOM05D005370 ORTHO05D006659 3.7e-54 215.3 185 65.9
PGSC0003DMG400003760 Solanum tuberosum HOM05D005370 ORTHO05D006659 2.2e-51 206.1 178 65.2
CAN.G851.23 Capsicum annuum HOM05D005370 ORTHO05D006659 5.5e-50 201.4 187 61.5
CSS0021022 Camellia sinensis var. sinensis HOM05D005370 ORTHO05D006659 1.2e-36 157.1 178 55.6
Cc01_g08030 Coffea canephora HOM05D005370 ORTHO05D006659 3.4e-36 155.6 174 55.2
Migut.D00369 Erythranthe guttata HOM05D005370 ORTHO05D006659 5.9e-36 154.8 172 53.5
SalBow4G0733 Salvia bowleyana HOM05D005370 ORTHO05D006659 6.5e-35 151.4 172 51.2
TWI18G0973 Tripterygium wilfordii HOM05D005370 ORTHO05D006659 1.6e-33 146.7 174 51.1
DCAR_023471 Daucus carota HOM05D005370 ORTHO05D006659 2.1e-33 146.4 177 49.7
Lsat_1_v5_gn_8_94841 Lactuca sativa HOM05D005370 ORTHO05D006659 3.0e-32 142.5 174 50.6
TAR362G0430 Trochodendron aralioides HOM05D005370 ORTHO05D006659 3.0e-32 142.5 179 51.4
Sabra02G0036500 Salix brachista HOM05D005370 ORTHO05D006659 3.9e-32 142.1 177 49.2
SGA_v2.0_scaffold3169G54286 Striga asiatica HOM05D005370 ORTHO05D006659 3.9e-32 142.1 186 49.5
SGA_v2.0_scaffold580G53040 Striga asiatica HOM05D005370 ORTHO05D006659 5.1e-32 141.7 179 50.3
HanXRQChr02g0032381 Helianthus annuus HOM05D005370 ORTHO05D006659 1.1e-31 140.6 174 51.1
TWI12G0023 Tripterygium wilfordii HOM05D005370 ORTHO05D006659 2.0e-31 139.8 174 46.6
ECA236G0510 Erigeron canadensis HOM05D005370 ORTHO05D006659 5.7e-31 138.3 167 50.3
CiPaw.02G117200 Carya illinoinensis HOM05D005370 ORTHO05D006659 9.7e-31 137.5 170 48.8
DCAR_028371 Daucus carota HOM05D005370 ORTHO05D006659 9.7e-31 137.5 186 47.3
Aqoxy3G04193 Aquilegia oxysepala HOM05D005370 ORTHO05D006659 1.3e-30 137.1 174 50.0
Ciclev10006717m.g Citrus clementina HOM05D005370 ORTHO05D006659 1.3e-30 137.1 173 46.2
Eucgr.G02606 Eucalyptus grandis HOM05D005370 ORTHO05D006659 2.2e-30 136.3 174 50.6
Potri.002G045500 Populus trichocarpa HOM05D005370 ORTHO05D006659 2.8e-30 136.0 175 49.1
AUR62032263 Chenopodium quinoa HOM05D005370 ORTHO05D006659 3.7e-30 135.6 183 49.2
Cfa018256 Carpinus fangiana HOM05D005370 ORTHO05D006659 8.2e-30 134.4 171 46.8
Gorai.005G046600 Gossypium raimondii HOM05D005370 ORTHO05D006659 1.4e-29 133.7 175 47.4
AUR62011949 Chenopodium quinoa HOM05D005370 ORTHO05D006659 1.8e-29 133.3 183 49.2
Gohir.D02G042266 Gossypium hirsutum HOM05D005370 ORTHO05D006659 1.8e-29 133.3 175 47.4
Ah.11g050020 Amaranthus hybridus HOM05D005370 ORTHO05D006659 4.1e-29 132.1 183 48.6
MBI15_g19756_MAGBIO Magnolia biondii HOM05D005370 ORTHO05D006659 4.1e-29 132.1 169 47.9
COL.COLO4_15774 Corchorus olitorius HOM05D005370 ORTHO05D006659 5.3e-29 131.7 173 48.0
Gohir.A02G035301 Gossypium hirsutum HOM05D005370 ORTHO05D006659 5.3e-29 131.7 175 46.3
Prupe.1G175900 Prunus persica HOM05D005370 ORTHO05D006659 7.0e-29 131.3 171 46.8
EL10Ac5g10469 Beta vulgaris HOM05D005370 ORTHO05D006659 9.1e-29 131.0 183 45.4
Prupe.1G027700 Prunus persica HOM05D005370 ORTHO05D006659 1.2e-28 130.6 171 48.0
Nn3g19501 Nelumbo nucifera HOM05D005370 ORTHO05D006659 2.0e-28 129.8 178 45.5
GSVIVG01018102001 Vitis vinifera HOM05D005370 ORTHO05D006659 3.5e-28 129.0 170 45.9
Sed0023556 Sechium edule HOM05D005370 ORTHO05D006659 1.0e-27 127.5 175 46.9
CANSAT11G0223 Cannabis sativa HOM05D005370 ORTHO05D006659 1.3e-27 127.1 171 49.7
FAN22G1699 Fragaria x ananassa HOM05D005370 ORTHO05D006659 1.3e-27 127.1 176 41.5
Dinv22486 Davidia involucrata HOM05D005370 ORTHO05D006659 3.8e-27 125.6 155 51.0
FAN17G2982 Fragaria x ananassa HOM05D005370 ORTHO05D006659 5.0e-27 125.2 176 40.9
QL06p015215 Quercus lobata HOM05D005370 ORTHO05D006659 5.0e-27 125.2 172 44.8
RcHm_v2.0_Chr4g0389631 Rosa chinensis HOM05D005370 ORTHO05D006659 5.0e-27 125.2 171 43.3
MELO3C005475.2 Cucumis melo HOM05D005370 ORTHO05D006659 6.5e-27 124.8 176 47.7
arahy.Tifrunner.gnm1.ann1.XNPI4G Arachis hypogaea HOM05D005370 ORTHO05D006659 8.5e-27 124.4 169 47.3
Manes.01G202000 Manihot esculenta HOM05D005370 ORTHO05D006659 1.1e-26 124.0 174 43.7
Phvul.007G177000 Phaseolus vulgaris HOM05D005370 ORTHO05D006659 1.1e-26 124.0 177 46.3
CsaV3_5G004690 Cucumis sativus L. HOM05D005370 ORTHO05D006659 1.5e-26 123.6 176 47.2
arahy.Tifrunner.gnm1.ann1.T9F7M4 Arachis hypogaea HOM05D005370 ORTHO05D006659 1.9e-26 123.2 169 46.2
Glyma.10G031500 Glycine max HOM05D005370 ORTHO05D006659 1.9e-26 123.2 170 44.7
FvH4_4g02310 Fragaria vesca HOM05D005370 ORTHO05D006659 3.2e-26 122.5 171 42.7
Ca_24537_v3 Cicer arietinum L. HOM05D005370 ORTHO05D006659 4.2e-26 122.1 169 49.1
Ca_14753_v3 Cicer arietinum L. HOM05D005370 ORTHO05D006659 5.5e-26 121.7 169 48.5
Duzib052G0322 Durio zibethinus HOM05D005370 ORTHO05D006659 9.4e-26 120.9 175 45.1
Thecc.04G244800 Theobroma cacao HOM05D005370 ORTHO05D006659 1.2e-25 120.6 175 45.7
Lalb_Chr02g0142451 Lupinus albus HOM05D005370 ORTHO05D006659 1.6e-25 120.2 171 44.4
arahy.Tifrunner.gnm1.ann1.7J2YFM Arachis hypogaea HOM05D005370 ORTHO05D006659 2.1e-25 119.8 169 45.6
CANSAT11G2293 Cannabis sativa HOM05D005370 ORTHO05D006659 2.1e-25 119.8 171 47.4
PSO210G0029 Papaver somniferum HOM05D005370 ORTHO05D006659 2.1e-25 119.8 174 46.6
Prupe.2G050700 Prunus persica HOM05D005370 ORTHO05D006659 2.7e-25 119.4 170 42.9
Actinidia27521 Actinidia chinensis HOM05D005370 ORTHO05D006659 3.6e-25 119.0 174 48.9
PSO238G0055 Papaver somniferum HOM05D005370 ORTHO05D006659 6.1e-25 118.2 173 45.1
Lj5g0014373 Lotus japonicus HOM05D005370 ORTHO05D006659 2.3e-24 116.3 170 43.5
Oeu025788.2 Olea europaea HOM05D005370 ORTHO05D006659 4.0e-24 115.5 137 54.0
Actinidia19979 Actinidia chinensis HOM05D005370 ORTHO05D006659 6.7e-24 114.8 94 68.1
VMungo0720G0865 Vigna mungo HOM05D005370 ORTHO05D006659 6.7e-24 114.8 173 44.5
Cc01_g05520 Coffea canephora HOM05D005370 ORTHO05D006659 4.4e-23 112.1 159 49.1
HPP92_015262 Vanilla planifolia HOM05D005370 ORTHO05D006659 1.3e-22 110.5 175 46.3
CDE07G1268 Ceratophyllum demersum HOM05D005370 ORTHO05D006659 1.7e-22 110.2 174 42.0
Medtr1g070900 Medicago truncatula HOM05D005370 ORTHO05D006659 2.8e-22 109.4 170 43.5
ATR0665G285 Amborella trichopoda HOM05D005370 ORTHO05D006659 6.3e-22 108.2 181 42.0
Psat3g119240 Pisum sativum HOM05D005370 ORTHO05D006659 4.5e-20 102.1 170 41.2
FAN12G2588 Fragaria x ananassa HOM05D005370 ORTHO05D006659 1.1e-18 97.4 159 38.4
Zm00001eb201750 Zea mays HOM05D005370 ORTHO05D006659 4.2e-18 95.5 195 35.9
Hund02875 Selenicereus undatus HOM05D005370 ORTHO05D006659 1.4e-16 90.5 176 34.7
CAN.G257.103 Capsicum annuum HOM05D005370 ORTHO05D006659 4.0e-16 89.0 52 88.5
Haze_11274 Corylus avellana HOM05D005370 ORTHO05D006659 5.2e-16 88.6 136 43.4
Haze_21184 Corylus avellana HOM05D005370 ORTHO05D006659 8.8e-16 87.8 137 43.1
Sp2g08480 Schrenkiella parvula HOM05D005370 ORTHO05D006659 7.5e-15 84.7 163 41.7
MD04G1026200 Malus domestica HOM05D005370 ORTHO05D006659 1.7e-14 83.6 136 39.0
AT5G43680 Arabidopsis thaliana HOM05D005370 ORTHO05D006659 2.2e-14 83.2 165 38.2
Thhalv10017901m.g Eutrema salsugineum HOM05D005370 ORTHO05D006659 2.2e-14 83.2 170 38.8
BraA06t27643Z Brassica rapa HOM05D005370 ORTHO05D006659 2.8e-14 82.8 163 40.5
Nn1g02548 Nelumbo nucifera HOM05D005370 ORTHO05D000069 2.8e-14 82.8 134 40.3
PGSC0003DMG400017885 Solanum tuberosum HOM05D005370 ORTHO05D006659 4.8e-14 82.0 54 77.8
ClCG01G004480 Citrullus lanatus HOM05D005370 ORTHO05D006659 8.3e-14 81.3 139 38.1
Sc24g0004270 Simmondsia chinensis HOM05D005370 ORTHO05D006659 1.4e-13 80.5 152 40.8
MBI11_g15920_MAGBIO Magnolia biondii HOM05D005370 ORTHO05D006659 1.8e-13 80.1 133 40.6
BcaC06g34636 Brassica carinata HOM05D005370 ORTHO05D006659 2.4e-13 79.7 167 38.3
C07p26250 Brassica napus HOM05D005370 ORTHO05D006659 2.4e-13 79.7 167 38.3
BolC7t43153H Brassica oleracea HOM05D005370 ORTHO05D006659 2.4e-13 79.7 167 38.3
BcaC06g31683 Brassica carinata HOM05D005370 ORTHO05D006659 3.1e-13 79.3 163 39.3
AL8G16570 Arabidopsis lyrata HOM05D005370 ORTHO05D006659 7.0e-13 78.2 165 38.8
Cpa.g.sc58.39 Carica papaya HOM05D005370 ORTHO05D006659 7.0e-13 78.2 137 41.6
Nitab4.5_0002156g0030 Nicotiana tabacum HOM05D005370 ORTHO05D006659 7.0e-13 78.2 54 72.2
CARHR179930 Cardamine hirsuta HOM05D005370 ORTHO05D006659 1.6e-12 77.0 166 39.2
A06p47750 Brassica napus HOM05D005370 ORTHO05D006659 2.0e-12 76.6 163 37.4
Aa31LG5G3560 Aethionema arabicum HOM05D005370 ORTHO05D006659 3.5e-12 75.9 171 35.7
Carub.0008s0497 Capsella rubella HOM05D005370 ORTHO05D006659 4.5e-12 75.5 163 38.7
Nitab4.5_0001840g0120 Nicotiana tabacum HOM05D005370 ORTHO05D006659 7.7e-12 74.7 54 68.5
Mapoly0029s0143 Marchantia polymorpha HOM05D005370 ORTHO05D006659 2.2e-11 73.2 186 37.6
CBR_g32014 Chara braunii HOM05D005370 ORTHO05D006659 3.8e-11 72.4 189 33.9
MBI18_g19775_MAGBIO Magnolia biondii HOM05D005370 ORTHO05D006659 6.5e-11 71.6 144 36.1
Os11g0550900 Oryza sativa ssp. japonica HOM05D005370 ORTHO05D006659 6.5e-11 71.6 209 28.7
Duzib212G0616 Durio zibethinus HOM05D005370 ORTHO05D006659 1.5e-10 70.5 166 34.9
Psat0s8363g0040 Pisum sativum HOM05D005370 ORTHO05D006659 4.2e-10 68.9 135 34.1
Psat1g083920 Pisum sativum HOM05D005370 ORTHO05D006659 4.2e-10 68.9 135 34.1
Psat1g084080 Pisum sativum HOM05D005370 ORTHO05D006659 4.2e-10 68.9 135 34.1
MBI16_g45671_MAGBIO Magnolia biondii HOM05D005370 ORTHO05D006659 1.2e-09 67.4 133 37.6
SEGI_21191 Sequoiadendron giganteum HOM05D005370 ORTHO05D006659 1.6e-09 67.0 93 48.4
CDE03G0266 Ceratophyllum demersum HOM05D005370 ORTHO05D006659 2.7e-09 66.2 179 31.8
MBI16_g44196_MAGBIO Magnolia biondii HOM05D005370 ORTHO05D006659 3.0e-08 62.8 128 38.3
Pp3c17_23420 Physcomitrium patens HOM05D005370 ORTHO05D006659 4.0e-08 62.4 178 32.0
MBI02_g40862_MAGBIO Magnolia biondii HOM05D005370 ORTHO05D006659 2.6e-07 59.7 128 35.9
MSTRG.18281 Avicennia marina HOM05D005370 ORTHO05D006659 1.3e-06 57.4 70 48.6
SGA_v2.0_scaffold1G00551 Striga asiatica HOM05D006471 ORTHO05D008157 2.8e-06 56.2 30 86.7


User provided reference genes

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