Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen01g040130 Solanum pennellii HOM05D007414 ORTHO05D009482 4.9e-249 864.0 429 100.0
Solyc01g096400.4 Solanum lycopersicum HOM05D007414 ORTHO05D009482 5.8e-242 840.5 429 98.1
PGSC0003DMG400018334 Solanum tuberosum HOM05D007414 ORTHO05D009482 3.7e-233 811.2 429 94.6
Nitab4.5_0004955g0030 Nicotiana tabacum HOM05D007414 ORTHO05D009482 2.9e-209 731.9 430 85.3
CAN.G1045.37 Capsicum annuum HOM05D007414 ORTHO05D009482 1.5e-205 719.5 429 85.5
Nitab4.5_0000307g0260 Nicotiana tabacum HOM05D007414 ORTHO05D009482 5.8e-202 707.6 425 83.8
Peaxi162Scf00767g00524 Petunia axillaris HOM05D007414 ORTHO05D009482 2.0e-165 586.3 390 77.4
Actinidia02265 Actinidia chinensis HOM05D007414 ORTHO05D009482 2.6e-157 559.3 371 74.9
MSTRG.20514 Avicennia marina HOM05D007414 ORTHO05D009482 2.8e-156 555.8 421 67.9
CSS0022385 Camellia sinensis var. sinensis HOM05D007414 ORTHO05D009482 3.7e-156 555.4 371 74.1
Hma1.2p1_1202F.1_g266840 Hydrangea macrophylla HOM05D007414 ORTHO05D009482 9.1e-155 550.8 430 64.4
vmacro12698 Vaccinium macrocarpon HOM05D007414 ORTHO05D009482 1.3e-153 547.0 433 64.7
QL04p017831 Quercus lobata HOM05D007414 ORTHO05D009482 8.8e-150 534.3 405 66.2
Nn7g36686 Nelumbo nucifera HOM05D007414 ORTHO05D009482 2.6e-149 532.7 379 69.1
GSVIVG01013487001 Vitis vinifera HOM05D007414 ORTHO05D009482 2.6e-149 532.7 434 65.7
CiPaw.13G013700 Carya illinoinensis HOM05D007414 ORTHO05D009482 2.8e-148 529.3 384 68.2
TAR623G0974 Trochodendron aralioides HOM05D007414 ORTHO05D009482 8.3e-148 527.7 415 65.5
DCAR_031835 Daucus carota HOM05D007414 ORTHO05D009482 1.4e-147 526.9 377 69.5
Dinv22037 Davidia involucrata HOM05D007414 ORTHO05D009482 1.6e-146 523.5 404 67.3
COL.COLO4_20658 Corchorus olitorius HOM05D007414 ORTHO05D009482 2.7e-146 522.7 432 62.7
Duzib114G0511 Durio zibethinus HOM05D007414 ORTHO05D009482 1.5e-144 516.9 384 67.4
Cc02_g30210 Coffea canephora HOM05D007414 ORTHO05D009482 4.2e-144 515.4 435 63.0
Lsat_1_v5_gn_4_29901 Lactuca sativa HOM05D007414 ORTHO05D009482 1.2e-143 513.8 400 65.0
CANSAT56G3550 Cannabis sativa HOM05D007414 ORTHO05D009482 3.6e-143 512.3 425 63.5
Gorai.010G216100 Gossypium raimondii HOM05D007414 ORTHO05D009482 4.7e-143 511.9 382 66.8
HanXRQChr16g0525321 Helianthus annuus HOM05D007414 ORTHO05D009482 1.4e-142 510.4 372 69.9
MD02G1287000 Malus domestica HOM05D007414 ORTHO05D009482 2.3e-142 509.6 376 69.7
Manes.11G006000 Manihot esculenta HOM05D007414 ORTHO05D009482 2.3e-142 509.6 436 61.5
Thecc.10G154500 Theobroma cacao HOM05D007414 ORTHO05D009482 4.0e-142 508.8 381 66.1
Atru.chr12.1333 Acer truncatum HOM05D007414 ORTHO05D009482 2.0e-141 506.5 383 65.5
ECA234G1800 Erigeron canadensis HOM05D007414 ORTHO05D009482 2.0e-141 506.5 372 68.5
RcHm_v2.0_Chr1g0324301 Rosa chinensis HOM05D007414 ORTHO05D009482 2.8e-140 502.7 376 67.0
TWI15G0498 Tripterygium wilfordii HOM05D007414 ORTHO05D009482 8.3e-140 501.1 436 62.2
Gohir.D10G192600 Gossypium hirsutum HOM05D007414 ORTHO05D009482 2.0e-138 496.5 433 60.0
Gorai.011G215300 Gossypium raimondii HOM05D007414 ORTHO05D009482 3.5e-138 495.7 433 60.0
FAN03G2686 Fragaria x ananassa HOM05D007414 ORTHO05D009482 1.3e-137 493.8 376 65.7
FvH4_7g03070 Fragaria vesca HOM05D006097 ORTHO05D008538 1.7e-137 493.4 376 65.7
FAN06G2659 Fragaria x ananassa HOM05D007414 ORTHO05D009482 1.7e-137 493.4 376 65.7
Eucgr.G03234 Eucalyptus grandis HOM05D007414 ORTHO05D009482 2.9e-137 492.7 384 64.1
Glyma.04G137000 Glycine max HOM05D007414 ORTHO05D009482 2.9e-137 492.7 438 59.6
Glyma.11G155300 Glycine max HOM05D007414 ORTHO05D009482 2.9e-137 492.7 375 65.6
PGR031G2549 Punica granatum HOM05D007414 ORTHO05D009482 2.9e-137 492.7 433 60.5
Rhsim01G0124300 Rhododendron simsii HOM05D007414 ORTHO05D009482 6.6e-137 491.5 380 65.8
Potri.001G027600 Populus trichocarpa HOM05D007414 ORTHO05D009482 8.6e-137 491.1 380 64.5
FAN10G2712 Fragaria x ananassa HOM05D007414 ORTHO05D009482 1.5e-136 490.3 376 65.2
Medtr3g014680 Medicago truncatula HOM05D007414 ORTHO05D009482 1.5e-136 490.3 419 60.6
CsaV3_5G024500 Cucumis sativus L. HOM05D007414 ORTHO05D009482 2.5e-136 489.6 406 61.6
VMungo1080G1369 Vigna mungo HOM05D007414 ORTHO05D009482 7.3e-136 488.0 375 65.3
Gohir.A10G185400 Gossypium hirsutum HOM05D007414 ORTHO05D009482 1.2e-135 487.3 408 61.3
Phvul.005G026400 Phaseolus vulgaris HOM05D007414 ORTHO05D009482 4.0e-134 482.3 375 64.5
Lalb_Chr25g0282101 Lupinus albus HOM05D007414 ORTHO05D009482 6.8e-134 481.5 376 64.6
Lj3g0021878 Lotus japonicus HOM05D007414 ORTHO05D009482 1.3e-132 477.2 379 62.8
Ciclev10028543m.g Citrus clementina HOM05D007414 ORTHO05D009482 4.9e-132 475.3 376 64.6
AUR62032647 Chenopodium quinoa HOM05D007414 ORTHO05D009482 5.4e-131 471.9 429 58.3
Sabra01G0020000 Salix brachista HOM05D007414 ORTHO05D009482 5.4e-131 471.9 412 59.0
ClCG01G007530 Citrullus lanatus HOM05D007414 ORTHO05D009482 2.0e-130 469.9 377 62.9
MELO3C005149.2 Cucumis melo HOM05D007414 ORTHO05D009482 7.8e-130 468.0 432 57.4
arahy.Tifrunner.gnm1.ann1.GMDI7B Arachis hypogaea HOM05D007414 ORTHO05D009482 1.7e-129 466.8 435 57.9
arahy.Tifrunner.gnm1.ann1.XZAR1L Arachis hypogaea HOM05D007414 ORTHO05D009482 5.0e-129 465.3 435 57.0
Sc11g0006450 Simmondsia chinensis HOM05D007414 ORTHO05D009482 8.6e-129 464.5 427 58.1
Gohir.A06G174800 Gossypium hirsutum HOM05D007414 ORTHO05D009482 1.1e-128 464.2 321 70.7
Gohir.D06G184800 Gossypium hirsutum HOM05D007414 ORTHO05D009482 1.6e-127 460.3 321 70.1
PSO384G0147 Papaver somniferum HOM05D007414 ORTHO05D009482 2.8e-127 459.5 385 61.3
PSO339G0457 Papaver somniferum HOM05D007414 ORTHO05D009482 5.2e-126 455.3 439 56.3
EL10Ac2g02800 Beta vulgaris HOM05D007414 ORTHO05D009482 2.4e-123 446.4 463 54.0
Sed0006433 Sechium edule HOM05D007414 ORTHO05D009482 3.5e-122 442.6 351 63.0
THA.LOC104826727 Tarenaya hassleriana HOM05D007414 ORTHO05D009482 1.0e-121 441.0 378 60.1
Manes.15G192920 Manihot esculenta HOM05D007414 ORTHO05D009482 1.7e-121 440.3 369 62.1
Ah.12g062800 Amaranthus hybridus HOM05D007414 ORTHO05D009482 3.9e-121 439.1 348 63.8
Aqoxy1G00360 Aquilegia oxysepala HOM05D007414 ORTHO05D009482 6.6e-121 438.3 418 57.9
Nn7g36678 Nelumbo nucifera HOM05D007414 ORTHO05D009482 9.5e-120 434.5 408 58.6
Potri.003G196200 Populus trichocarpa HOM05D007414 ORTHO05D009482 4.9e-116 422.2 372 58.1
Haze_03038 Corylus avellana HOM05D007414 ORTHO05D009482 3.9e-113 412.5 378 58.2
ATR0745G014 Amborella trichopoda HOM05D007414 ORTHO05D009482 7.6e-109 398.3 380 57.1
Hund13359 Selenicereus undatus HOM05D007414 ORTHO05D009482 6.0e-106 388.7 383 53.8
Dinv32026 Davidia involucrata HOM05D007414 ORTHO05D009482 8.7e-105 384.8 252 73.4
AUR62026859 Chenopodium quinoa HOM05D007414 ORTHO05D009482 1.2e-98 364.4 305 60.0
Psat5g222240 Pisum sativum HOM05D007414 ORTHO05D009482 9.0e-94 348.2 289 59.2
SEGI_40936 Sequoiadendron giganteum HOM05D007414 ORTHO05D009482 5.8e-93 345.5 391 47.3
Prupe.2G036300 Prunus persica HOM05D007414 ORTHO05D009482 7.6e-93 345.1 283 63.6
Migut.O00949 Erythranthe guttata HOM05D007414 ORTHO05D009482 2.7e-90 336.7 254 68.9
MBI19_g25612_MAGBIO Magnolia biondii HOM05D007414 ORTHO05D009482 2.6e-77 293.5 219 66.7
AagrBONN_evm.TU.Sc2ySwM_362.1466 Anthoceros agrestis HOM05D007414 ORTHO05D009482 2.2e-63 247.3 398 38.7
Mapoly0007s0139 Marchantia polymorpha HOM05D007414 ORTHO05D009482 1.3e-60 238.0 414 36.0
Pp3c11_910 Physcomitrium patens HOM05D007414 ORTHO05D009482 1.6e-58 231.1 373 39.9
Zm00001eb128490 Zea mays HOM05D007414 ORTHO05D009482 6.7e-57 225.7 207 57.5
Nitab4.5_0008639g0030 Nicotiana tabacum HOM05D007414 ORTHO05D009482 5.7e-56 222.6 173 68.8
DCAR_000332 Daucus carota HOM05D007414 ORTHO05D009482 6.3e-55 219.2 169 67.5
Os01g0272800 Oryza sativa ssp. japonica HOM05D007414 ORTHO05D009482 4.7e-50 203.0 212 51.9
Migut.B01233 Erythranthe guttata HOM05D007414 ORTHO05D009482 2.8e-47 193.7 164 64.0
TPR.G1409 Trifolium pratense HOM05D007414 ORTHO05D009482 1.0e-41 175.3 125 67.2
Lsat_1_v5_gn_0_2021 Lactuca sativa HOM05D007414 ORTHO05D009482 8.3e-15 85.9 75 52.0
Lsat_1_v5_gn_3_3821 Lactuca sativa HOM05D007414 ORTHO05D009482 1.9e-11 74.7 49 65.3
PRCOL_00005884 Prasinoderma coloniale HOM05D007414 ORTHO05D009482 1.9e-11 74.7 255 28.2
Actinidia18166 Actinidia chinensis HOM05D006098 ORTHO05D007470 1.2e-08 65.5 362 25.4
Actinidia14735 Actinidia chinensis HOM05D006098 ORTHO05D007470 1.5e-08 65.1 384 25.5
Lsat_1_v5_gn_3_19721 Lactuca sativa HOM05D006098 ORTHO05D007470 2.0e-08 64.7 268 27.2
HanXRQChr17g0537231 Helianthus annuus HOM05D006098 ORTHO05D007470 3.4e-08 63.9 385 24.9
SEGI_36011 Sequoiadendron giganteum HOM05D007414 ORTHO05D009482 5.8e-08 63.2 69 43.5
Nn1g09368 Nelumbo nucifera HOM05D006098 ORTHO05D007470 9.8e-08 62.4 397 23.4
THA.LOC104811082 Tarenaya hassleriana HOM05D006098 ORTHO05D007470 1.7e-07 61.6 382 23.8
MD02G1286500 Malus domestica HOM05D007414 ORTHO05D009482 2.2e-07 61.2 75 49.3
Oeu014631.1 Olea europaea HOM05D007414 ORTHO05D009482 3.7e-07 60.5 39 71.8
PRCOL_00006348 Prasinoderma coloniale HOM05D007414 ORTHO05D333730 3.7e-07 60.5 106 39.6
Aa31LG6G1850 Aethionema arabicum HOM05D006098 ORTHO05D007470 4.9e-07 60.1 287 25.4
Cpa.g.sc71.63 Carica papaya HOM05D006098 ORTHO05D007470 4.9e-07 60.1 273 26.7
Dinv41811 Davidia involucrata HOM05D006098 ORTHO05D007470 4.9e-07 60.1 388 24.5
HanXRQChr13g0411151 Helianthus annuus HOM05D006098 ORTHO05D007470 1.1e-06 58.9 360 22.8
Manes.15G184300 Manihot esculenta HOM05D006098 ORTHO05D007470 1.1e-06 58.9 400 24.8
PGR031G3371 Punica granatum HOM05D006098 ORTHO05D007470 1.1e-06 58.9 357 23.8
SMO364G0549 Selaginella moellendorffii HOM05D006098 ORTHO05D007470 1.1e-06 58.9 389 24.4
ECA240G1264 Erigeron canadensis HOM05D006098 ORTHO05D007470 1.4e-06 58.5 362 23.8
AUR62010477 Chenopodium quinoa HOM05D006098 ORTHO05D007470 2.4e-06 57.8 454 22.9
Oeu042191.1 Olea europaea HOM05D006098 ORTHO05D007470 2.4e-06 57.8 391 24.0
Oeu042192.1 Olea europaea HOM05D006098 ORTHO05D007470 2.4e-06 57.8 391 24.0
Migut.A00537 Erythranthe guttata HOM05D006098 ORTHO05D007470 3.2e-06 57.4 280 25.7
HanXRQChr03g0081041 Helianthus annuus HOM05D006098 ORTHO05D007470 3.2e-06 57.4 339 25.4
SalBow4G1396 Salvia bowleyana HOM05D006098 ORTHO05D007470 3.2e-06 57.4 355 24.8
DCAR_028369 Daucus carota HOM05D006098 ORTHO05D007470 5.4e-06 56.6 394 23.4
Nn7g37397 Nelumbo nucifera HOM05D006098 ORTHO05D007470 5.4e-06 56.6 322 26.1
Oeu057164.1 Olea europaea HOM05D006098 ORTHO05D007470 5.4e-06 56.6 384 23.2
AUR62030416 Chenopodium quinoa HOM05D006098 ORTHO05D007470 7.1e-06 56.2 267 25.5
Lj8A337G13 Lonicera japonica HOM05D006098 ORTHO05D007470 9.2e-06 55.8 276 26.4
TPR.G34603 Trifolium pratense HOM05D007414 ORTHO05D009482 9.2e-06 55.8 40 60.0


User provided reference genes

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