Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen01g040010 Solanum pennellii HOM05D019980 ORTHO05D022204 1.6e-129 466.5 309 100.0
Solyc01g096250.2 Solanum lycopersicum HOM05D019980 ORTHO05D022204 1.5e-114 416.8 310 89.0
PGSC0003DMG400046434 Solanum tuberosum HOM05D019980 ORTHO05D022204 2.1e-97 359.8 320 75.9
CAN.G1415.1 Capsicum annuum HOM05D019980 ORTHO05D022204 9.4e-61 238.0 354 59.6
Nitab4.5_0000307g0130 Nicotiana tabacum HOM05D019980 ORTHO05D022204 5.0e-54 215.7 362 55.8
Nitab4.5_0002527g0010 Nicotiana tabacum HOM05D019980 ORTHO05D022204 1.2e-47 194.5 361 51.8
Hma1.2p1_0180F.1_g079790 Hydrangea macrophylla HOM05D004242 ORTHO05D004349 1.4e-08 64.7 129 36.4
Hma1.2p1_0309F.1_g120440 Hydrangea macrophylla HOM05D004242 ORTHO05D004349 4.2e-08 63.2 120 37.5
Peaxi162Scf00014g00294 Petunia axillaris HOM05D004242 ORTHO05D004349 4.2e-08 63.2 108 38.9
Sopen08g021310 Solanum pennellii HOM05D004242 ORTHO05D004349 5.4e-08 62.8 120 36.7
CAN.G211.7 Capsicum annuum HOM05D004242 ORTHO05D004349 9.3e-08 62.0 99 42.4
Nitab4.5_0000508g0190 Nicotiana tabacum HOM05D004242 ORTHO05D004349 3.5e-07 60.1 183 30.6
Duzib138G0794 Durio zibethinus HOM05D004242 ORTHO05D004349 4.6e-07 59.7 145 33.1
PGSC0003DMG400007374 Solanum tuberosum HOM05D004242 ORTHO05D004349 4.6e-07 59.7 287 27.5
Duzib133G0806 Durio zibethinus HOM05D004242 ORTHO05D004349 6.0e-07 59.3 142 32.4
Oeu042952.1 Olea europaea HOM05D004242 ORTHO05D004349 6.0e-07 59.3 124 33.9
GSVIVG01027401001 Vitis vinifera HOM05D004242 ORTHO05D004349 7.8e-07 58.9 133 33.1
Actinidia25370 Actinidia chinensis HOM05D004242 ORTHO05D004349 1.0e-06 58.5 286 29.7
CSS0005133 Camellia sinensis var. sinensis HOM05D004242 ORTHO05D004349 1.7e-06 57.8 117 35.0
CSS0009998 Camellia sinensis var. sinensis HOM05D004242 ORTHO05D004349 1.7e-06 57.8 117 35.0
CsaV3_6G008950 Cucumis sativus L. HOM05D004242 ORTHO05D004349 2.3e-06 57.4 127 33.1
CiPaw.02G043200 Carya illinoinensis HOM05D004242 ORTHO05D004349 3.0e-06 57.0 134 32.8
MELO3C022249.2 Cucumis melo HOM05D004242 ORTHO05D004349 3.0e-06 57.0 97 36.1
SGA_v2.0_scaffold98G29435 Striga asiatica HOM05D004242 ORTHO05D004349 3.0e-06 57.0 166 30.1
Dinv34239 Davidia involucrata HOM05D004242 ORTHO05D004349 3.9e-06 56.6 257 30.4
Gohir.D07G140400 Gossypium hirsutum HOM05D004242 ORTHO05D004349 3.9e-06 56.6 137 33.6
TWI14G0118 Tripterygium wilfordii HOM05D004242 ORTHO05D004349 5.1e-06 56.2 152 31.6
Gohir.A07G135500 Gossypium hirsutum HOM05D004242 ORTHO05D004349 6.6e-06 55.8 137 33.6
Potri.014G102466 Populus trichocarpa HOM05D004242 ORTHO05D004349 6.6e-06 55.8 140 34.3
FAN17G2081 Fragaria x ananassa HOM05D004242 ORTHO05D004349 8.7e-06 55.5 151 34.4
Gorai.001G152400 Gossypium raimondii HOM05D004242 ORTHO05D004349 8.7e-06 55.5 137 33.6
Thecc.01G336900 Theobroma cacao HOM05D004242 ORTHO05D004349 8.7e-06 55.5 168 32.1


User provided reference genes

Program Settings