Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen01g040000 Solanum pennellii HOM05D006631 ORTHO05D008359 2.0e-155 552.4 277 100.0
Solyc01g096240.4 Solanum lycopersicum HOM05D006631 ORTHO05D008359 6.5e-154 547.4 277 98.2
PGSC0003DMG400000125 Solanum tuberosum HOM05D006631 ORTHO05D008359 1.8e-151 539.3 277 97.1
Nitab4.5_0002527g0020 Nicotiana tabacum HOM05D006631 ORTHO05D008359 5.2e-119 431.4 287 79.1
Nitab4.5_0000307g0140 Nicotiana tabacum HOM05D006631 ORTHO05D008359 2.3e-114 416.0 275 80.0
CANSAT56G2365 Cannabis sativa HOM05D006631 ORTHO05D008359 4.7e-112 408.3 280 75.4
QL08p046273 Quercus lobata HOM05D006631 ORTHO05D008359 6.2e-112 407.9 277 75.1
Dinv34238 Davidia involucrata HOM05D006631 ORTHO05D008359 1.4e-111 406.8 278 74.8
CSS0022670 Camellia sinensis var. sinensis HOM05D006631 ORTHO05D008359 5.8e-110 401.4 279 74.6
Manes.05G019200 Manihot esculenta HOM05D006631 ORTHO05D008359 2.2e-109 399.4 282 74.5
FvH4_7g17240 Fragaria vesca HOM05D006631 ORTHO05D008359 6.4e-109 397.9 278 73.0
RcHm_v2.0_Chr1g0360621 Rosa chinensis HOM05D006631 ORTHO05D008359 8.3e-109 397.5 279 73.8
Gohir.D11G103700 Gossypium hirsutum HOM05D006631 ORTHO05D008359 2.4e-108 396.0 277 74.0
Gorai.007G111000 Gossypium raimondii HOM05D006631 ORTHO05D008359 2.4e-108 396.0 277 74.0
Phvul.006G115700 Phaseolus vulgaris HOM05D006631 ORTHO05D008359 5.4e-108 394.8 279 72.4
FAN06G3756 Fragaria x ananassa HOM05D006631 ORTHO05D008359 7.1e-108 394.4 280 72.9
Gohir.A11G099200 Gossypium hirsutum HOM05D006631 ORTHO05D008359 7.1e-108 394.4 277 73.6
Actinidia28101 Actinidia chinensis HOM05D006631 ORTHO05D008359 9.2e-108 394.0 284 73.2
Thecc.01G337000 Theobroma cacao HOM05D006631 ORTHO05D008359 9.2e-108 394.0 278 73.0
GSVIVG01027398001 Vitis vinifera HOM05D006631 ORTHO05D008359 1.2e-107 393.7 278 74.1
THA.LOC104817387 Tarenaya hassleriana HOM05D006631 ORTHO05D008359 1.6e-107 393.3 279 71.7
CsaV3_3G007830 Cucumis sativus L. HOM05D006631 ORTHO05D008359 2.1e-107 392.9 277 74.0
FAN06G3280 Fragaria x ananassa HOM05D006631 ORTHO05D008359 3.5e-107 392.1 280 72.5
PSO063G1328 Papaver somniferum HOM05D006631 ORTHO05D008359 4.6e-107 391.7 284 70.8
AUR62022720 Chenopodium quinoa HOM05D006631 ORTHO05D008359 6.0e-107 391.3 279 72.4
MSTRG.4800 Avicennia marina HOM05D006631 ORTHO05D008359 1.7e-106 389.8 283 71.7
ClCG05G000610 Citrullus lanatus HOM05D006631 ORTHO05D008359 1.7e-106 389.8 277 74.0
PSO782G2421 Papaver somniferum HOM05D006631 ORTHO05D008359 1.7e-106 389.8 284 71.1
Psat3g001400 Pisum sativum HOM05D006631 ORTHO05D008359 1.7e-106 389.8 277 71.8
Cfa003762 Carpinus fangiana HOM05D006631 ORTHO05D008359 8.6e-106 387.5 280 72.1
Lj1g0014889 Lotus japonicus HOM05D006631 ORTHO05D008359 1.1e-105 387.1 279 71.7
Potri.014G102400 Populus trichocarpa HOM05D006631 ORTHO05D008359 1.1e-105 387.1 282 72.3
TAR375G0108 Trochodendron aralioides HOM05D006631 ORTHO05D008359 1.1e-105 387.1 280 71.4
COL.COLO4_06257 Corchorus olitorius HOM05D006631 ORTHO05D008359 1.5e-105 386.7 263 76.4
Lalb_Chr19g0133561 Lupinus albus HOM05D006631 ORTHO05D008359 1.5e-105 386.7 285 71.6
Rhsim01G0176500 Rhododendron simsii HOM05D006631 ORTHO05D008359 1.9e-105 386.3 286 70.6
SalBow5G1997 Salvia bowleyana HOM05D006631 ORTHO05D008359 7.3e-105 384.4 278 71.9
Cpa.g.sc144.12 Carica papaya HOM05D006631 ORTHO05D008359 1.2e-104 383.6 278 70.1
MD01G1086200 Malus domestica HOM05D006631 ORTHO05D008359 1.2e-104 383.6 277 71.8
Prupe.2G193800 Prunus persica HOM05D006631 ORTHO05D008359 1.2e-104 383.6 277 72.2
Migut.N01525 Erythranthe guttata HOM05D006631 ORTHO05D008359 2.1e-104 382.9 297 68.0
Lj9A602T26 Lonicera japonica HOM05D006631 ORTHO05D008359 2.8e-104 382.5 305 66.9
CiPaw.01G079400 Carya illinoinensis HOM05D006631 ORTHO05D008359 3.6e-104 382.1 281 73.0
AUR62004534 Chenopodium quinoa HOM05D006631 ORTHO05D008359 4.7e-104 381.7 284 70.8
MELO3C005999.2 Cucumis melo HOM05D006631 ORTHO05D008359 4.7e-104 381.7 306 68.3
Glyma.03G259400 Glycine max HOM05D006631 ORTHO05D008359 4.7e-104 381.7 277 69.7
CAN.G1415.2 Capsicum annuum HOM05D006631 ORTHO05D008359 2.3e-103 379.4 202 91.6
Ciclev10021628m.g Citrus clementina HOM05D006631 ORTHO05D008359 4.0e-103 378.6 277 69.7
TPR.G4790 Trifolium pratense HOM05D006631 ORTHO05D008359 4.0e-103 378.6 286 69.2
TWI59G0463 Tripterygium wilfordii HOM05D006631 ORTHO05D008359 4.0e-103 378.6 278 69.8
Duzib138G0935 Durio zibethinus HOM05D006631 ORTHO05D008359 8.9e-103 377.5 282 70.9
PGR031G0416 Punica granatum HOM05D006631 ORTHO05D008359 8.9e-103 377.5 277 69.7
Nn1g00373 Nelumbo nucifera HOM05D006631 ORTHO05D008359 1.2e-102 377.1 280 71.4
Glyma.19G258300 Glycine max HOM05D006631 ORTHO05D008359 1.5e-102 376.7 278 68.7
Atru.chr5.731 Acer truncatum HOM05D006631 ORTHO05D008359 2.0e-102 376.3 282 69.5
Ca_09530_v3 Cicer arietinum L. HOM05D006631 ORTHO05D008359 2.6e-102 375.9 279 69.2
Peaxi162Scf00767g00111 Petunia axillaris HOM05D006631 ORTHO05D008359 3.4e-102 375.6 202 88.6
Medtr7g117970 Medicago truncatula HOM05D006631 ORTHO05D008359 5.8e-102 374.8 278 70.9
MSTRG.28278 Avicennia marina HOM05D006631 ORTHO05D008359 2.2e-101 372.9 237 79.3
ECA240G4795 Erigeron canadensis HOM05D006631 ORTHO05D008359 1.1e-100 370.5 280 69.6
Eucgr.D02642 Eucalyptus grandis HOM05D006631 ORTHO05D008359 5.4e-100 368.2 284 68.3
Hund16731 Selenicereus undatus HOM05D006631 ORTHO05D008359 3.5e-99 365.5 277 67.9
Phvul.010G116700 Phaseolus vulgaris HOM05D006631 ORTHO05D008359 1.7e-98 363.2 281 67.3
Aa31LG10G15890 Aethionema arabicum HOM05D006631 ORTHO05D008359 8.6e-98 360.9 219 77.6
arahy.Tifrunner.gnm1.ann1.588I57 Arachis hypogaea HOM05D006631 ORTHO05D008359 3.3e-97 359.0 279 67.0
arahy.Tifrunner.gnm1.ann1.NC261Q Arachis hypogaea HOM05D006631 ORTHO05D008359 5.6e-97 358.2 279 67.0
Carub.0005s2861 Capsella rubella HOM05D006631 ORTHO05D008359 2.1e-96 356.3 226 76.1
AL5G44450 Arabidopsis lyrata HOM05D006631 ORTHO05D008359 2.8e-96 355.9 264 67.4
A09p53900 Brassica napus HOM05D006631 ORTHO05D008359 6.2e-96 354.8 226 75.2
C08p36710 Brassica napus HOM05D006631 ORTHO05D008359 6.2e-96 354.8 226 75.2
BolC8t51253H Brassica oleracea HOM05D006631 ORTHO05D008359 6.2e-96 354.8 226 75.2
BraA09t40806Z Brassica rapa HOM05D006631 ORTHO05D008359 6.2e-96 354.8 226 75.2
vmacro12589 Vaccinium macrocarpon HOM05D006631 ORTHO05D008359 6.2e-96 354.8 213 81.7
Lsat_1_v5_gn_3_141021 Lactuca sativa HOM05D006631 ORTHO05D008359 1.8e-95 353.2 279 66.3
FAN03G0022 Fragaria x ananassa HOM05D006631 ORTHO05D008359 4.0e-95 352.1 235 73.2
AT3G61870 Arabidopsis thaliana HOM05D006631 ORTHO05D008359 1.2e-94 350.5 279 64.5
Sabra14G0075400 Salix brachista HOM05D006631 ORTHO05D008359 1.5e-94 350.1 202 84.2
Ah.05g179220 Amaranthus hybridus HOM05D006631 ORTHO05D008359 1.3e-93 347.1 282 62.8
Thhalv10006166m.g Eutrema salsugineum HOM05D006631 ORTHO05D008359 1.3e-93 347.1 279 65.6
FAN01G0947 Fragaria x ananassa HOM05D006631 ORTHO05D008359 1.3e-93 347.1 265 66.8
CARHR172210 Cardamine hirsuta HOM05D006631 ORTHO05D008359 1.7e-93 346.7 282 65.2
MBI04_g33414_MAGBIO Magnolia biondii HOM05D006631 ORTHO05D008359 3.8e-93 345.5 305 64.3
FAN10G3243 Fragaria x ananassa HOM05D006631 ORTHO05D008359 4.9e-93 345.1 278 64.7
Sp5g01490 Schrenkiella parvula HOM05D006631 ORTHO05D008359 8.4e-93 344.4 282 63.1
Glyma.16G021600 Glycine max HOM05D006631 ORTHO05D008359 1.9e-92 343.2 278 66.2
Sed0011774 Sechium edule HOM05D006631 ORTHO05D008359 3.2e-92 342.4 276 67.8
Haze_15698 Corylus avellana HOM05D006631 ORTHO05D008359 5.4e-92 341.7 202 81.2
HanXRQChr03g0094051 Helianthus annuus HOM05D006631 ORTHO05D008359 1.0e-90 337.4 282 66.0
VMungo0331G0918 Vigna mungo HOM05D006631 ORTHO05D008359 3.6e-88 328.9 200 79.5
Oeu007870.1 Olea europaea HOM05D006631 ORTHO05D008359 1.1e-87 327.4 178 89.9
VMungo0540G1103 Vigna mungo HOM05D006631 ORTHO05D008359 2.4e-87 326.2 205 77.6
CDE07G1250 Ceratophyllum demersum HOM05D006631 ORTHO05D008359 3.1e-87 325.9 225 72.4
Sc23g0001960 Simmondsia chinensis HOM05D006631 ORTHO05D008359 5.3e-87 325.1 202 76.2
Lalb_Chr17g0342841 Lupinus albus HOM05D006631 ORTHO05D008359 1.5e-86 323.6 279 63.4
SEGI_25065 Sequoiadendron giganteum HOM05D006631 ORTHO05D008359 2.0e-86 323.2 219 73.5
HPP92_002500 Vanilla planifolia HOM05D006631 ORTHO05D008359 1.3e-85 320.5 241 69.3
Os02g0122500 Oryza sativa ssp. japonica HOM05D006631 ORTHO05D008359 6.6e-82 308.1 214 71.5
Mapoly0049s0137 Marchantia polymorpha HOM05D006631 ORTHO05D008359 2.1e-80 303.1 221 68.3
ATR0620G070 Amborella trichopoda HOM05D006631 ORTHO05D008359 2.8e-80 302.8 248 62.9
BcaC07g42601 Brassica carinata HOM05D006631 ORTHO05D008359 7.6e-78 294.7 223 66.8
Pp3c5_3210 Physcomitrium patens HOM05D006631 ORTHO05D008359 1.3e-77 293.9 221 68.8
SMO143G0155 Selaginella moellendorffii HOM05D006631 ORTHO05D008359 2.9e-77 292.7 200 71.0
FAN10G2512 Fragaria x ananassa HOM05D006631 ORTHO05D008359 8.4e-77 291.2 280 60.0
DCAR_008654 Daucus carota HOM05D006631 ORTHO05D008359 7.4e-73 278.1 180 76.1
CBR_g37545 Chara braunii HOM05D006631 ORTHO05D008359 5.8e-70 268.5 198 66.2
arahy.Tifrunner.gnm1.ann1.S1C8P4 Arachis hypogaea HOM05D006631 ORTHO05D008359 8.4e-69 264.6 281 54.4
EL10Ac1g00220 Beta vulgaris HOM05D006631 ORTHO05D008359 8.4e-69 264.6 225 61.8
MCO07G366 Micromonas commoda HOM05D006631 ORTHO05D008359 1.2e-67 260.8 226 58.8
SGA_v2.0_scaffold581G53044 Striga asiatica HOM05D006631 ORTHO05D008359 3.5e-67 259.2 156 78.8
MD07G1155100 Malus domestica HOM05D006631 ORTHO05D008359 3.7e-64 249.2 156 79.5
arahy.Tifrunner.gnm1.ann1.GG2XE6 Arachis hypogaea HOM05D006631 ORTHO05D008359 1.2e-62 244.2 243 57.2
Cc02_g39740 Coffea canephora HOM05D006631 ORTHO05D008359 1.0e-61 241.1 204 59.3
Cre12.g519300 Chlamydomonas reinhardtii HOM05D006631 ORTHO05D008359 3.2e-60 236.1 219 56.2
CDE09G1080 Ceratophyllum demersum HOM05D006631 ORTHO05D008359 7.4e-57 224.9 218 51.8
PRCOL_00004956 Prasinoderma coloniale HOM05D006631 ORTHO05D008359 9.0e-55 218.0 222 52.3
CSS0025910 Camellia sinensis var. sinensis HOM05D006631 ORTHO05D008359 1.2e-51 207.6 116 83.6
unitig_8.g3405 Utricularia gibba HOM05D006631 ORTHO05D008359 3.9e-50 202.6 176 63.1
AagrBONN_evm.TU.Sc2ySwM_362.2495 Anthoceros agrestis HOM05D006631 ORTHO05D008359 2.2e-45 186.8 114 77.2
TAR374G1086 Trochodendron aralioides HOM05D000482 ORTHO05D000349 6.5e-37 158.7 200 46.5
TAR374G0170 Trochodendron aralioides HOM05D000482 ORTHO05D000349 3.1e-23 113.2 81 65.4
TAR374G1450 Trochodendron aralioides HOM05D000482 ORTHO05D000349 7.0e-23 112.1 116 51.7
unitig_22.g6820 Utricularia gibba HOM05D006631 ORTHO05D008359 4.4e-09 66.2 62 58.1
GSVIVG01001070001 Vitis vinifera HOM05D006631 ORTHO05D008359 3.7e-08 63.2 34 76.5


User provided reference genes

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