Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen01g039620 Solanum pennellii HOM05D015341 ORTHO05D011718 1.5e-89 332.8 170 100.0
Solyc01g095880.1 Solanum lycopersicum HOM05D015341 ORTHO05D011718 1.5e-84 316.2 170 91.2
PGSC0003DMG400000107 Solanum tuberosum HOM05D015341 ORTHO05D011718 2.1e-62 242.7 169 70.4
PGSC0003DMG400000106 Solanum tuberosum HOM05D015341 ORTHO05D011718 5.7e-52 208.0 142 69.0
Peaxi162Scf00714g00519 Petunia axillaris HOM05D015341 ORTHO05D011718 1.6e-30 136.7 137 50.4
Nitab4.5_0004999g0050 Nicotiana tabacum HOM05D015341 ORTHO05D011718 1.1e-29 134.0 165 43.0
Peaxi162Scf00074g00078 Petunia axillaris HOM05D015341 ORTHO05D011718 1.1e-29 134.0 140 48.6
Nitab4.5_0000838g0200 Nicotiana tabacum HOM05D015341 ORTHO05D011718 5.8e-28 128.3 165 41.2
CAN.G986.7 Capsicum annuum HOM05D015341 ORTHO05D011718 7.6e-28 127.9 144 46.5
Dinv32585 Davidia involucrata HOM05D013692 ORTHO05D011718 1.7e-16 90.1 127 38.6
Migut.B01313 Erythranthe guttata HOM05D018190 ORTHO05D011718 4.0e-13 79.0 124 33.1
Migut.G00748 Erythranthe guttata HOM05D018190 ORTHO05D011718 3.4e-12 75.9 119 36.1
PSO675G1908 Papaver somniferum HOM05D032674 ORTHO05D031249 1.9e-10 70.1 143 31.5
Gohir.D02G053350 Gossypium hirsutum HOM05D000896 ORTHO05D000594 3.2e-10 69.3 134 33.6
PSO170G0580 Papaver somniferum HOM05D047907 ORTHO05D011718 4.2e-10 68.9 148 30.4
unitig_26.g9463 Utricularia gibba HOM05D013692 ORTHO05D011718 5.4e-10 68.6 115 31.3
Glyma.02G291400 Glycine max HOM05D000896 ORTHO05D000594 1.2e-09 67.4 140 32.1
Gohir.D02G050732 Gossypium hirsutum HOM05D000896 ORTHO05D000594 2.7e-09 66.2 134 33.6
Gorai.005G056000 Gossypium raimondii HOM05D000896 ORTHO05D000594 2.7e-09 66.2 134 33.6
Gohir.A02G048201 Gossypium hirsutum HOM05D000896 ORTHO05D000594 4.6e-09 65.5 135 33.3
ECA233G4381 Erigeron canadensis HOM05D000896 ORTHO05D000594 6.0e-09 65.1 158 27.2
Gohir.D02G050666 Gossypium hirsutum HOM05D000896 ORTHO05D000594 6.0e-09 65.1 134 32.8
Gohir.A02G044702 Gossypium hirsutum HOM05D000896 ORTHO05D000594 7.9e-09 64.7 134 32.1
Gohir.A07G201750 Gossypium hirsutum HOM05D000896 ORTHO05D000594 7.9e-09 64.7 135 33.3
FAN10G3722 Fragaria x ananassa HOM05D000896 ORTHO05D000594 1.3e-08 63.9 130 28.5
Gohir.A13G226166 Gossypium hirsutum HOM05D000896 ORTHO05D000594 2.3e-08 63.2 133 31.6
Gohir.A01G161180 Gossypium hirsutum HOM05D000896 ORTHO05D000594 3.0e-08 62.8 134 29.9
MBI11_g35027_MAGBIO Magnolia biondii HOM05D018115 ORTHO05D017274 3.0e-08 62.8 124 30.6
CsaV3_2G029240 Cucumis sativus L. HOM05D000896 ORTHO05D000594 3.9e-08 62.4 138 29.7
Manes.14G006500 Manihot esculenta HOM05D000896 ORTHO05D000594 3.9e-08 62.4 126 27.0
FvH4_7g13550 Fragaria vesca HOM05D000896 ORTHO05D000594 5.1e-08 62.0 141 27.0
FAN01G0395 Fragaria x ananassa HOM05D000896 ORTHO05D000594 5.1e-08 62.0 141 27.0
FAN06G0427 Fragaria x ananassa HOM05D000896 ORTHO05D000594 5.1e-08 62.0 141 27.0
FAN06G5122 Fragaria x ananassa HOM05D000896 ORTHO05D000594 5.1e-08 62.0 138 29.0
Aa31LG8G17200 Aethionema arabicum HOM05D002733 ORTHO05D003856 1.1e-07 60.8 144 29.9
Medtr7g098870 Medicago truncatula HOM05D000896 ORTHO05D000594 1.5e-07 60.5 140 27.9
Aqoxy1G01797 Aquilegia oxysepala HOM05D000896 ORTHO05D000594 1.9e-07 60.1 143 27.3
Ciclev10030162m.g Citrus clementina HOM05D000896 ORTHO05D000594 2.5e-07 59.7 144 25.0
Oeu000092.1 Olea europaea HOM05D013692 ORTHO05D011718 2.5e-07 59.7 84 35.7
Oeu000096.1 Olea europaea HOM05D013692 ORTHO05D011718 2.5e-07 59.7 84 35.7
Oeu000097.1 Olea europaea HOM05D013692 ORTHO05D011718 2.5e-07 59.7 84 35.7
FAN03G2502 Fragaria x ananassa HOM05D000896 ORTHO05D000594 3.3e-07 59.3 141 27.0
Oeu000095.1 Olea europaea HOM05D013692 ORTHO05D011718 3.3e-07 59.3 84 34.5
PSO017G5841 Papaver somniferum HOM05D032674 ORTHO05D031249 3.3e-07 59.3 118 33.9
PGR044G1241 Punica granatum HOM05D000896 ORTHO05D000594 3.3e-07 59.3 132 29.5
SGA_v2.0_scaffold342G49412 Striga asiatica HOM05D018190 ORTHO05D011718 3.3e-07 59.3 122 30.3
Migut.N01666 Erythranthe guttata HOM05D018190 ORTHO05D011718 4.3e-07 58.9 128 32.0
Gohir.D07G208050 Gossypium hirsutum HOM05D000896 ORTHO05D000594 4.3e-07 58.9 126 31.0
Oeu000093.1 Olea europaea HOM05D013692 ORTHO05D011718 4.3e-07 58.9 84 35.7
FAN06G0415 Fragaria x ananassa HOM05D000896 ORTHO05D000594 5.6e-07 58.5 158 27.2
FAN06G5054 Fragaria x ananassa HOM05D000896 ORTHO05D000594 5.6e-07 58.5 158 27.2
Gohir.D12G043450 Gossypium hirsutum HOM05D000896 ORTHO05D000594 5.6e-07 58.5 140 29.3
FAN01G0184 Fragaria x ananassa HOM05D000896 ORTHO05D000594 7.4e-07 58.2 158 27.2
Gohir.D01G148400 Gossypium hirsutum HOM05D000896 ORTHO05D000594 7.4e-07 58.2 134 29.9
BcaC05g24385 Brassica carinata HOM05D000896 ORTHO05D000594 9.6e-07 57.8 139 27.3
C05p03790 Brassica napus HOM05D000896 ORTHO05D000594 9.6e-07 57.8 139 27.3
BolC5t29156H Brassica oleracea HOM05D000896 ORTHO05D000594 9.6e-07 57.8 139 27.3
FvH4_7g31340 Fragaria vesca HOM05D000896 ORTHO05D000594 9.6e-07 57.8 158 27.2
Gohir.D12G042950 Gossypium hirsutum HOM05D000896 ORTHO05D000594 9.6e-07 57.8 140 29.3
Aa31LG1G8320 Aethionema arabicum HOM05D000896 ORTHO05D000594 1.6e-06 57.0 145 27.6
Aa31LG1G8390 Aethionema arabicum HOM05D000896 ORTHO05D000594 1.6e-06 57.0 145 27.6
BraA10t42685Z Brassica rapa HOM05D000896 ORTHO05D000594 2.1e-06 56.6 138 28.3
ClCG08G014520 Citrullus lanatus HOM05D000001 ORTHO05D009054 2.1e-06 56.6 141 27.7
Gorai.008G045700 Gossypium raimondii HOM05D000896 ORTHO05D000594 2.1e-06 56.6 140 28.6
PGR044G1601 Punica granatum HOM05D000896 ORTHO05D000594 2.1e-06 56.6 128 29.7
Gohir.A12G043480 Gossypium hirsutum HOM05D000896 ORTHO05D000594 2.8e-06 56.2 140 28.6
Gohir.A12G043560 Gossypium hirsutum HOM05D000896 ORTHO05D000594 2.8e-06 56.2 140 28.6
Gohir.A12G043720 Gossypium hirsutum HOM05D000896 ORTHO05D000594 2.8e-06 56.2 140 28.6
Oeu020433.1 Olea europaea HOM05D013692 ORTHO05D011718 2.8e-06 56.2 90 31.1
Thecc.03G197000 Theobroma cacao HOM05D000896 ORTHO05D000594 2.8e-06 56.2 135 28.1
AT2G31720 Arabidopsis thaliana HOM05D000896 ORTHO05D000594 3.7e-06 55.8 120 30.0
CANSAT11G2686 Cannabis sativa HOM05D000896 ORTHO05D000594 3.7e-06 55.8 143 27.3
Gohir.A01G163850 Gossypium hirsutum HOM05D000896 ORTHO05D000594 3.7e-06 55.8 132 29.5
Sp4g13910 Schrenkiella parvula HOM05D000896 ORTHO05D000594 3.7e-06 55.8 120 29.2
TPR.G1176 Trifolium pratense HOM05D000896 ORTHO05D000594 3.7e-06 55.8 123 32.5
MELO3C010986.2 Cucumis melo HOM05D000896 ORTHO05D000594 4.8e-06 55.5 139 28.8
Manes.15G190800 Manihot esculenta HOM05D000896 ORTHO05D000594 4.8e-06 55.5 102 29.4
Aa31LG7G1550 Aethionema arabicum HOM05D002733 ORTHO05D003856 8.1e-06 54.7 147 27.9
Duzib138G1815 Durio zibethinus HOM05D000896 ORTHO05D000594 8.1e-06 54.7 141 27.7
RcHm_v2.0_Chr4g0415241 Rosa chinensis HOM05D000896 ORTHO05D000594 8.1e-06 54.7 138 26.8


User provided reference genes

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