Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen01g039530 Solanum pennellii HOM05D009669 ORTHO05D000181 1.5e-61 239.2 113 100.0
Solyc01g095780.2 Solanum lycopersicum HOM05D009669 ORTHO05D000181 1.1e-59 233.0 113 96.5
PGSC0003DMG400000218 Solanum tuberosum HOM05D009669 ORTHO05D000181 1.4e-54 216.1 113 89.4
CAN.G986.12 Capsicum annuum HOM05D009669 ORTHO05D000181 4.5e-37 157.9 115 68.7
Nitab4.5_0004999g0100 Nicotiana tabacum HOM05D009669 ORTHO05D000181 2.0e-32 142.5 113 59.3
Peaxi162Scf00786g00433 Petunia axillaris HOM05D009669 ORTHO05D000181 3.5e-29 131.7 113 54.9
Nitab4.5_0000838g0180 Nicotiana tabacum HOM05D009669 ORTHO05D000181 3.8e-28 128.3 103 62.1
Peaxi162Scf00786g00445 Petunia axillaris HOM05D009669 ORTHO05D000181 3.8e-28 128.3 116 57.8
Nitab4.5_0000838g0110 Nicotiana tabacum HOM05D009669 ORTHO05D000181 6.6e-28 127.5 113 54.0
Nitab4.5_0012336g0010 Nicotiana tabacum HOM05D009669 ORTHO05D000181 6.6e-28 127.5 113 54.0
Peaxi162Scf00786g00443 Petunia axillaris HOM05D009669 ORTHO05D000181 4.0e-17 91.7 97 50.5
Nitab4.5_0000838g0190 Nicotiana tabacum HOM05D009669 ORTHO05D000181 6.8e-17 90.9 100 48.0
GSVIVG01027088001 Vitis vinifera HOM05D009669 ORTHO05D000181 6.8e-17 90.9 112 38.4
Prupe.2G187100 Prunus persica HOM05D000275 ORTHO05D000181 6.4e-15 84.3 113 38.1
Nitab4.5_0004999g0110 Nicotiana tabacum HOM05D009669 ORTHO05D000181 1.1e-14 83.6 112 38.4
Dinv32580 Davidia involucrata HOM05D009669 ORTHO05D000181 3.2e-14 82.0 108 37.0
Nitab4.5_0000838g0170 Nicotiana tabacum HOM05D009669 ORTHO05D000181 4.1e-14 81.6 112 37.5
SalBow3G1637 Salvia bowleyana HOM05D009669 ORTHO05D000181 1.2e-13 80.1 112 36.6
Eucgr.E00056 Eucalyptus grandis HOM05D009669 ORTHO05D000181 7.8e-13 77.4 90 35.6
FvH4_7g16320 Fragaria vesca HOM05D000275 ORTHO05D000181 1.3e-12 76.6 113 37.2
FAN06G2922 Fragaria x ananassa HOM05D000275 ORTHO05D000181 1.3e-12 76.6 113 37.2
FAN06G3596 Fragaria x ananassa HOM05D000275 ORTHO05D000181 1.3e-12 76.6 113 37.2
Hma1.2p1_0295F.1_g116640 Hydrangea macrophylla HOM05D000275 ORTHO05D000181 6.6e-12 74.3 120 37.5
FAN01G1361 Fragaria x ananassa HOM05D009669 ORTHO05D000181 1.1e-11 73.6 113 36.3
SGA_v2.0_scaffold5G03013 Striga asiatica HOM05D004730 ORTHO05D005705 1.1e-11 73.6 90 35.6
TAR636G0501 Trochodendron aralioides HOM05D000275 ORTHO05D000181 1.1e-11 73.6 113 34.5
FAN03G3319 Fragaria x ananassa HOM05D000275 ORTHO05D000181 1.5e-11 73.2 113 35.4
MSTRG.4810 Avicennia marina HOM05D009669 ORTHO05D000181 2.5e-11 72.4 114 35.1
Thecc.01G343500 Theobroma cacao HOM05D000275 ORTHO05D000181 2.5e-11 72.4 112 32.1
Peaxi162Scf00786g00431 Petunia axillaris HOM05D000275 ORTHO05D000181 4.3e-11 71.6 111 32.4
Ciclev10022783m.g Citrus clementina HOM05D009669 ORTHO05D000181 5.6e-11 71.2 96 39.6
Lsat_1_v5_gn_4_33221 Lactuca sativa HOM05D009669 ORTHO05D000181 5.6e-11 71.2 93 35.5
MD07G1148600 Malus domestica HOM05D000275 ORTHO05D000181 5.6e-11 71.2 113 33.6
CsaV3_3G008100 Cucumis sativus L. HOM05D000275 ORTHO05D000181 7.3e-11 70.9 102 34.3
ECA234G4055 Erigeron canadensis HOM05D009669 ORTHO05D000181 7.3e-11 70.9 92 35.9
MD01G1079700 Malus domestica HOM05D000275 ORTHO05D000181 7.3e-11 70.9 113 34.5
FAN10G1205 Fragaria x ananassa HOM05D000275 ORTHO05D000181 1.2e-10 70.1 91 36.3
FAN10G2621 Fragaria x ananassa HOM05D000275 ORTHO05D000181 1.2e-10 70.1 91 36.3
PGR042G1181 Punica granatum HOM05D000275 ORTHO05D000181 2.8e-10 68.9 92 32.6
CAN.G986.13 Capsicum annuum HOM05D000275 ORTHO05D000181 6.2e-10 67.8 117 29.1
Manes.02G010200 Manihot esculenta HOM05D000275 ORTHO05D000181 6.2e-10 67.8 105 29.5
Sc01g0002760 Simmondsia chinensis HOM05D000275 ORTHO05D000181 1.8e-09 66.2 114 34.2
Actinidia10131 Actinidia chinensis HOM05D000275 ORTHO05D000181 5.2e-09 64.7 115 31.3
TAR374G1222 Trochodendron aralioides HOM05D000275 ORTHO05D000181 6.8e-09 64.3 109 34.9
AUR62004483 Chenopodium quinoa HOM05D000275 ORTHO05D000181 2.0e-08 62.8 91 31.9
Thecc.06G008800 Theobroma cacao HOM05D000275 ORTHO05D010802 5.8e-08 61.2 114 31.6
Ah.05g179650 Amaranthus hybridus HOM05D000275 ORTHO05D000181 1.3e-07 60.1 90 31.1
MELO3C023497.2 Cucumis melo HOM05D000275 ORTHO05D000181 1.3e-07 60.1 98 35.7
CsaV3_7G031570 Cucumis sativus L. HOM05D000275 ORTHO05D000181 1.7e-07 59.7 98 34.7
Actinidia29298 Actinidia chinensis HOM05D000275 ORTHO05D010802 2.9e-07 58.9 112 31.2
EL10Ac1g00279 Beta vulgaris HOM05D000275 ORTHO05D000181 2.9e-07 58.9 87 32.2
Peaxi162Scf01343g00142 Petunia axillaris HOM05D000275 ORTHO05D000181 4.9e-07 58.2 109 31.2
Cpa.g.sc157.25 Carica papaya HOM05D000275 ORTHO05D000181 8.3e-07 57.4 111 29.7
Gohir.D05G112800 Gossypium hirsutum HOM05D000275 ORTHO05D010802 1.1e-06 57.0 115 32.2
Nn1g09584 Nelumbo nucifera HOM05D000275 ORTHO05D000181 1.1e-06 57.0 113 27.4
AUR62023471 Chenopodium quinoa HOM05D002290 ORTHO05D002532 1.4e-06 56.6 82 29.3
ClCG09G003610 Citrullus lanatus HOM05D000275 ORTHO05D000181 1.4e-06 56.6 102 33.3
Gorai.009G117000 Gossypium raimondii HOM05D000275 ORTHO05D010802 1.4e-06 56.6 115 31.3
Hma1.2p1_0071F.1_g037800 Hydrangea macrophylla HOM05D000275 ORTHO05D010802 1.9e-06 56.2 80 36.2
MD06G1106500 Malus domestica HOM05D009669 ORTHO05D000181 1.9e-06 56.2 120 30.0
Cpa.g.sc157.27 Carica papaya HOM05D000275 ORTHO05D000181 2.4e-06 55.8 113 26.5
Cpa.g.sc489.7 Carica papaya HOM05D000275 ORTHO05D010802 2.4e-06 55.8 107 31.8
Nitab4.5_0016619g0010 Nicotiana tabacum HOM05D000275 ORTHO05D010802 2.4e-06 55.8 80 36.2
Duzib160G0260 Durio zibethinus HOM05D000275 ORTHO05D010802 3.2e-06 55.5 114 29.8
Gohir.A05G112400 Gossypium hirsutum HOM05D000275 ORTHO05D010802 3.2e-06 55.5 115 31.3
Hund03716 Selenicereus undatus HOM05D000275 ORTHO05D000181 3.2e-06 55.5 108 29.6
Hund28933 Selenicereus undatus HOM05D000275 ORTHO05D000181 3.2e-06 55.5 108 30.6
Ah.08g209540 Amaranthus hybridus HOM05D000275 ORTHO05D000181 4.1e-06 55.1 78 35.9
CAN.G345.4 Capsicum annuum HOM05D000275 ORTHO05D000181 4.1e-06 55.1 70 38.6
Cpa.g.sc157.26 Carica papaya HOM05D000275 ORTHO05D000181 4.1e-06 55.1 111 27.0
Dinv43951 Davidia involucrata HOM05D000275 ORTHO05D000181 4.1e-06 55.1 81 35.8
THA.LOC104812117 Tarenaya hassleriana HOM05D000275 ORTHO05D010802 5.4e-06 54.7 73 39.7
Migut.M01927 Erythranthe guttata HOM05D000275 ORTHO05D010802 7.1e-06 54.3 73 31.5
COL.COLO4_26881 Corchorus olitorius HOM05D000275 ORTHO05D010802 9.2e-06 53.9 115 30.4


User provided reference genes

Program Settings