Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen01g038920 Solanum pennellii HOM05D003118 ORTHO05D003618 4.9e-199 697.6 349 100.0
Solyc01g095130.4 Solanum lycopersicum HOM05D003118 ORTHO05D003618 3.8e-159 565.1 348 83.9
Nitab4.5_0000915g0080 Nicotiana tabacum HOM05D003118 ORTHO05D003618 6.6e-95 351.7 350 56.9
Peaxi162Scf00020g01526 Petunia axillaris HOM05D003118 ORTHO05D003618 6.4e-90 335.1 327 56.6
Nitab4.5_0010695g0020 Nicotiana tabacum HOM05D003118 ORTHO05D003618 1.3e-79 300.8 303 55.4
GSVIVG01026973001 Vitis vinifera HOM05D003118 ORTHO05D003618 1.7e-66 257.3 339 40.7
PGSC0003DMG400000196 Solanum tuberosum HOM05D003118 ORTHO05D003618 1.1e-65 254.6 347 48.1
Cfa003868 Carpinus fangiana HOM05D003118 ORTHO05D003618 3.0e-63 246.5 341 39.9
GSVIVG01026971001 Vitis vinifera HOM05D003118 ORTHO05D003618 1.3e-61 241.1 344 38.4
QL04p055623 Quercus lobata HOM05D003118 ORTHO05D003618 1.4e-60 237.7 341 39.0
Haze_15568 Corylus avellana HOM05D003118 ORTHO05D003618 5.3e-60 235.7 384 36.5
Dinv37591 Davidia involucrata HOM05D003118 ORTHO05D003618 1.9e-57 227.3 351 37.6
TAR375G0293 Trochodendron aralioides HOM05D003118 ORTHO05D003618 1.9e-57 227.3 326 39.6
CiPaw.01G067900 Carya illinoinensis HOM05D003118 ORTHO05D003618 4.2e-57 226.1 376 35.6
Cc02_g38610 Coffea canephora HOM05D003118 ORTHO05D003618 1.2e-56 224.6 340 39.4
MSTRG.13862 Avicennia marina HOM05D003118 ORTHO05D003618 7.4e-54 215.3 339 36.6
TAR629G1012 Trochodendron aralioides HOM05D003118 ORTHO05D003618 2.2e-53 213.8 362 36.5
CSS0022485 Camellia sinensis var. sinensis HOM05D003118 ORTHO05D003618 2.8e-53 213.4 338 35.2
Dinv38896 Davidia involucrata HOM05D003118 ORTHO05D003618 4.8e-53 212.6 339 37.5
PSO266G0031 Papaver somniferum HOM05D003118 ORTHO05D003618 2.4e-52 210.3 345 34.8
Aqoxy7G00197 Aquilegia oxysepala HOM05D003118 ORTHO05D003618 6.9e-52 208.8 346 35.0
GSVIVG01019423001 Vitis vinifera HOM05D003118 ORTHO05D003618 2.0e-51 207.2 356 35.1
MBI07_g11721_MAGBIO Magnolia biondii HOM05D003118 ORTHO05D003618 2.6e-51 206.8 315 38.4
Actinidia28342 Actinidia chinensis HOM05D003118 ORTHO05D003618 3.4e-51 206.5 355 35.5
Manes.02G016600 Manihot esculenta HOM05D003118 ORTHO05D003618 3.4e-51 206.5 335 36.1
PSO384G4267 Papaver somniferum HOM05D003118 ORTHO05D003618 4.5e-51 206.1 345 34.2
PSO063G6388 Papaver somniferum HOM05D003118 ORTHO05D003618 2.9e-50 203.4 335 36.4
SalBow8G1076 Salvia bowleyana HOM05D003118 ORTHO05D003618 2.9e-50 203.4 321 36.8
PSO170G3062 Papaver somniferum HOM05D003118 ORTHO05D003618 6.5e-50 202.2 335 36.1
Prupe.5G107000 Prunus persica HOM05D003118 ORTHO05D003618 6.5e-50 202.2 338 34.0
Rhsim02G0236100 Rhododendron simsii HOM05D003118 ORTHO05D003618 1.4e-49 201.1 340 33.8
TWI81G0015 Tripterygium wilfordii HOM05D003118 ORTHO05D003618 2.5e-49 200.3 338 35.8
Nn6g32462 Nelumbo nucifera HOM05D003118 ORTHO05D003618 7.2e-49 198.7 335 35.8
FAN13G0863 Fragaria x ananassa HOM05D003118 ORTHO05D003618 9.3e-49 198.4 338 34.3
FvH4_5g03250 Fragaria vesca HOM05D003118 ORTHO05D003618 1.2e-48 198.0 338 34.3
Hma1.2p1_0216F.1_g091120 Hydrangea macrophylla HOM05D003118 ORTHO05D003618 1.2e-48 198.0 339 35.7
MD14G1112600 Malus domestica HOM05D003118 ORTHO05D003618 1.2e-48 198.0 338 33.1
Migut.E01210 Erythranthe guttata HOM05D003118 ORTHO05D003618 2.1e-48 197.2 343 33.8
RcHm_v2.0_Chr7g0196521 Rosa chinensis HOM05D003118 ORTHO05D003618 3.6e-48 196.4 337 33.5
FAN08G3653 Fragaria x ananassa HOM05D003118 ORTHO05D003618 4.6e-48 196.1 338 33.7
MD06G1091800 Malus domestica HOM05D003118 ORTHO05D003618 6.1e-48 195.7 338 34.0
CiPaw.11G129400 Carya illinoinensis HOM05D003118 ORTHO05D003618 1.3e-47 194.5 352 34.4
QL02p033293 Quercus lobata HOM05D003118 ORTHO05D003618 1.3e-47 194.5 346 33.5
Ca_24533_v3 Cicer arietinum L. HOM05D003118 ORTHO05D003618 1.8e-47 194.1 334 32.6
Gohir.D08G134400 Gossypium hirsutum HOM05D003118 ORTHO05D003618 2.3e-47 193.7 355 34.4
DCAR_004609 Daucus carota HOM05D003118 ORTHO05D003618 3.0e-47 193.4 338 34.0
Hund11431 Selenicereus undatus HOM05D003118 ORTHO05D003618 3.0e-47 193.4 343 33.8
Cc08_g15310 Coffea canephora HOM05D003118 ORTHO05D003618 5.1e-47 192.6 336 35.7
TWI14G1154 Tripterygium wilfordii HOM05D003118 ORTHO05D003618 6.7e-47 192.2 338 32.5
Lsat_1_v5_gn_6_84940 Lactuca sativa HOM05D003118 ORTHO05D003618 8.7e-47 191.8 338 34.9
Duzib205G0707 Durio zibethinus HOM05D003118 ORTHO05D003618 1.1e-46 191.4 356 34.8
VMungo1215G2430 Vigna mungo HOM05D003118 ORTHO05D003618 1.5e-46 191.0 335 31.9
Gohir.A08G114000 Gossypium hirsutum HOM05D003118 ORTHO05D003618 1.9e-46 190.7 356 34.3
Gorai.004G137500 Gossypium raimondii HOM05D003118 ORTHO05D003618 1.9e-46 190.7 356 34.0
Potri.003G133000 Populus trichocarpa HOM05D003118 ORTHO05D003618 2.5e-46 190.3 338 34.3
Glyma.11G020900 Glycine max HOM05D003118 ORTHO05D003618 4.3e-46 189.5 355 31.3
Glyma.01G222500 Glycine max HOM05D003118 ORTHO05D003618 5.7e-46 189.1 335 32.5
Atru.chr9.2107 Acer truncatum HOM05D003118 ORTHO05D003618 1.3e-45 188.0 355 34.6
DCAR_025216 Daucus carota HOM05D003118 ORTHO05D003618 1.3e-45 188.0 367 32.2
Haze_08750 Corylus avellana HOM05D003118 ORTHO05D003618 2.8e-45 186.8 314 34.1
CANSAT21G0202 Cannabis sativa HOM05D003118 ORTHO05D003618 3.7e-45 186.4 335 32.2
SGA_v2.0_scaffold144G35901 Striga asiatica HOM05D003118 ORTHO05D003618 4.8e-45 186.0 311 34.4
TPR.G6616 Trifolium pratense HOM05D003118 ORTHO05D003618 4.8e-45 186.0 370 33.2
CANSAT21G1093 Cannabis sativa HOM05D003118 ORTHO05D003618 6.3e-45 185.7 344 31.4
Oeu042365.1 Olea europaea HOM05D003118 ORTHO05D003618 6.3e-45 185.7 339 34.8
Sabra03G0095300 Salix brachista HOM05D003118 ORTHO05D003618 8.2e-45 185.3 353 32.6
Sopen08g003990 Solanum pennellii HOM05D003118 ORTHO05D003618 8.2e-45 185.3 313 35.1
SGA_v2.0_scaffold173G39132 Striga asiatica HOM05D003118 ORTHO05D003618 1.1e-44 184.9 315 35.6
Thecc.03G287000 Theobroma cacao HOM05D003118 ORTHO05D003618 1.8e-44 184.1 354 34.7
Aa31LG9G490 Aethionema arabicum HOM05D003118 ORTHO05D003618 3.1e-44 183.3 356 33.4
Medtr5g009920 Medicago truncatula HOM05D003118 ORTHO05D003618 4.1e-44 183.0 369 31.7
Eucgr.E00782 Eucalyptus grandis HOM05D003118 ORTHO05D003618 5.3e-44 182.6 313 36.1
Solyc08g008130.4 Solanum lycopersicum HOM05D003118 ORTHO05D003618 5.3e-44 182.6 338 33.7
Lsat_1_v5_gn_7_2680 Lactuca sativa HOM05D003118 ORTHO05D003618 6.9e-44 182.2 343 33.5
Lalb_Chr09g0320801 Lupinus albus HOM05D003118 ORTHO05D003618 6.9e-44 182.2 335 31.9
Peaxi162Scf00102g01644 Petunia axillaris HOM05D003118 ORTHO05D003618 2.0e-43 180.6 339 33.6
ECA246G2781 Erigeron canadensis HOM05D003118 ORTHO05D003618 3.4e-43 179.9 313 37.1
Psat2g183920 Pisum sativum HOM05D003118 ORTHO05D003618 7.7e-43 178.7 358 32.1
Nitab4.5_0005339g0020 Nicotiana tabacum HOM05D003118 ORTHO05D003618 1.0e-42 178.3 338 32.0
BcaC08g44538 Brassica carinata HOM05D003118 ORTHO05D003618 1.7e-42 177.6 355 31.8
C06p20020 Brassica napus HOM05D003118 ORTHO05D003618 1.7e-42 177.6 355 31.8
THA.LOC104823601 Tarenaya hassleriana HOM05D003118 ORTHO05D003618 3.8e-42 176.4 332 35.5
A07p20860 Brassica napus HOM05D003118 ORTHO05D003618 5.0e-42 176.0 355 32.1
BraA07t29773Z Brassica rapa HOM05D003118 ORTHO05D003618 5.0e-42 176.0 355 32.1
HanXRQChr13g0416081 Helianthus annuus HOM05D003118 ORTHO05D003618 8.5e-42 175.3 330 33.3
Phvul.002G160400 Phaseolus vulgaris HOM05D003118 ORTHO05D003618 8.5e-42 175.3 347 30.3
Sed0003885 Sechium edule HOM05D003118 ORTHO05D003618 1.1e-41 174.9 328 34.5
PGR042G1679 Punica granatum HOM05D003118 ORTHO05D003618 1.4e-41 174.5 363 31.4
Sp7g00460 Schrenkiella parvula HOM05D003118 ORTHO05D003618 1.9e-41 174.1 338 33.4
BcaB02g07884 Brassica carinata HOM05D003118 ORTHO05D003618 2.5e-41 173.7 355 31.5
HanXRQChr06g0166221 Helianthus annuus HOM05D003118 ORTHO05D003618 3.2e-41 173.3 314 36.0
HanXRQChr04g0120811 Helianthus annuus HOM05D003118 ORTHO05D003618 5.5e-41 172.6 338 32.8
HPP92_002884 Vanilla planifolia HOM05D003118 ORTHO05D003618 7.2e-41 172.2 356 33.7
CsaV3_5G002370 Cucumis sativus L. HOM05D003118 ORTHO05D003618 1.2e-40 171.4 317 32.8
ECA240G3271 Erigeron canadensis HOM05D000115 ORTHO05D003618 1.2e-40 171.4 322 34.5
Lsat_1_v5_gn_3_11501 Lactuca sativa HOM05D003118 ORTHO05D003618 1.2e-40 171.4 344 33.1
AL7G47820 Arabidopsis lyrata HOM05D003118 ORTHO05D003618 1.6e-40 171.0 354 32.8
AUR62010758 Chenopodium quinoa HOM05D003118 ORTHO05D003618 2.1e-40 170.6 315 32.1
HPP92_002895 Vanilla planifolia HOM05D003118 ORTHO05D003618 2.1e-40 170.6 356 33.4
Thhalv10027658m.g Eutrema salsugineum HOM05D003118 ORTHO05D003618 2.7e-40 170.2 354 32.5
FAN04G2035 Fragaria x ananassa HOM05D003118 ORTHO05D003618 2.7e-40 170.2 349 31.5
FAN04G2118 Fragaria x ananassa HOM05D003118 ORTHO05D003618 2.7e-40 170.2 349 31.5
HanXRQChr17g0533861 Helianthus annuus HOM05D003118 ORTHO05D003618 4.7e-40 169.5 314 33.4
Carub.0007s3389 Capsella rubella HOM05D003118 ORTHO05D003618 6.1e-40 169.1 354 32.2
arahy.Tifrunner.gnm1.ann1.78DXCF Arachis hypogaea HOM05D003118 ORTHO05D003618 7.9e-40 168.7 337 30.6
BcaC02g08950 Brassica carinata HOM05D003118 ORTHO05D003618 1.4e-39 167.9 354 31.6
C04p48560 Brassica napus HOM05D003118 ORTHO05D003618 1.4e-39 167.9 354 31.6
BolC4t26449H Brassica oleracea HOM05D003118 ORTHO05D003618 1.4e-39 167.9 354 31.6
A04p14690 Brassica napus HOM05D003118 ORTHO05D003618 1.8e-39 167.5 361 32.1
BolC6t37186H Brassica oleracea HOM05D003118 ORTHO05D003618 1.8e-39 167.5 371 30.5
BraA04t17109Z Brassica rapa HOM05D003118 ORTHO05D003618 1.8e-39 167.5 361 32.1
Cfa012251 Carpinus fangiana HOM05D003118 ORTHO05D003618 3.0e-39 166.8 357 30.8
LjContig00312_ERROPOS870357g0013212 Lotus japonicus HOM05D003118 ORTHO05D003618 3.9e-39 166.4 313 31.3
LjContig00312_ERROPOS870357g0002156 Lotus japonicus HOM05D003118 ORTHO05D003618 5.1e-39 166.0 303 32.7
CDE10G1109 Ceratophyllum demersum HOM05D003118 ORTHO05D003618 6.7e-39 165.6 339 29.8
SHI07074 Sapria himalayana HOM05D003118 ORTHO05D003618 8.8e-39 165.2 350 31.4
THA.LOC104809363 Tarenaya hassleriana HOM05D003118 ORTHO05D003618 8.8e-39 165.2 358 32.1
DCAR_000636 Daucus carota HOM05D003118 ORTHO05D003618 1.5e-38 164.5 302 30.8
CiPaw.12G088800 Carya illinoinensis HOM05D003118 ORTHO05D003618 2.6e-38 163.7 350 31.4
CARHR287630 Cardamine hirsuta HOM05D003118 ORTHO05D003618 3.3e-38 163.3 333 32.1
AT5G41580 Arabidopsis thaliana HOM05D003118 ORTHO05D003618 5.7e-38 162.5 354 31.4
BcaB06g27629 Brassica carinata HOM05D003118 ORTHO05D003618 7.4e-38 162.2 363 29.8
Nitab4.5_0002231g0040 Nicotiana tabacum HOM05D003118 ORTHO05D003618 7.4e-38 162.2 300 32.0
HPP92_000528 Vanilla planifolia HOM05D003118 ORTHO05D003618 1.3e-37 161.4 351 31.1
ECA236G1529 Erigeron canadensis HOM05D003118 ORTHO05D003618 2.8e-37 160.2 345 30.1
COL.COLO4_08355 Corchorus olitorius HOM05D003118 ORTHO05D003618 4.8e-37 159.5 337 31.8
Sed0011553 Sechium edule HOM05D003118 ORTHO05D003618 4.8e-37 159.5 337 32.0
TPR.G24280 Trifolium pratense HOM05D003118 ORTHO05D003618 4.8e-37 159.5 361 29.1
arahy.Tifrunner.gnm1.ann1.9S2WM4 Arachis hypogaea HOM05D003118 ORTHO05D003618 2.4e-36 157.1 335 28.7
Ciclev10024541m.g Citrus clementina HOM05D003118 ORTHO05D003618 3.1e-36 156.8 338 31.4
PSO266G0003 Papaver somniferum HOM05D003118 ORTHO05D003618 9.1e-36 155.2 346 31.5
EL10Ac5g12842 Beta vulgaris HOM05D003118 ORTHO05D003618 1.5e-35 154.5 275 33.8
Zm00001eb375680 Zea mays HOM05D003118 ORTHO05D003618 1.0e-34 151.8 324 29.3
SEGI_33305 Sequoiadendron giganteum HOM05D003118 ORTHO05D003618 2.2e-34 150.6 277 32.9
Ah.12g052020 Amaranthus hybridus HOM05D003118 ORTHO05D003618 6.5e-34 149.1 349 30.1
AUR62019759 Chenopodium quinoa HOM05D003118 ORTHO05D003618 1.4e-33 147.9 335 29.6
Os06g0164000 Oryza sativa ssp. japonica HOM05D003118 ORTHO05D003618 3.2e-33 146.7 309 29.1
vmacro11412 Vaccinium macrocarpon HOM05D003118 ORTHO05D003618 3.2e-33 146.7 303 29.7
CARHR008810 Cardamine hirsuta HOM05D003118 ORTHO05D003618 6.3e-29 132.5 315 30.5
Sc01g0009900 Simmondsia chinensis HOM05D003118 ORTHO05D003618 4.1e-28 129.8 256 31.6
C08p49770 Brassica napus HOM05D003118 ORTHO05D003618 5.3e-28 129.4 312 29.8
Medtr8g447390 Medicago truncatula HOM05D003118 ORTHO05D003618 1.2e-27 128.3 236 30.1
BcaB03g13535 Brassica carinata HOM05D003118 ORTHO05D003618 1.6e-27 127.9 315 29.2
BolC8t52504H Brassica oleracea HOM05D003118 ORTHO05D003618 3.5e-27 126.7 312 29.5
Aa31sc17G150 Aethionema arabicum HOM05D003118 ORTHO05D003618 4.5e-27 126.3 317 31.2
BcaC07g41918 Brassica carinata HOM05D003118 ORTHO05D003618 4.5e-27 126.3 312 29.5
A08p34920 Brassica napus HOM05D003118 ORTHO05D003618 4.5e-27 126.3 315 29.8
C08p12330 Brassica napus HOM05D003118 ORTHO05D003618 4.5e-27 126.3 316 31.3
MELO3C005717.2 Cucumis melo HOM05D003118 ORTHO05D003618 4.5e-27 126.3 347 29.4
AL1G19340 Arabidopsis lyrata HOM05D003118 ORTHO05D003618 7.7e-27 125.6 314 28.3
AT1G08910 Arabidopsis thaliana HOM05D003118 ORTHO05D003618 7.7e-27 125.6 319 28.8
Carub.0001s0824 Capsella rubella HOM05D003118 ORTHO05D003618 1.0e-26 125.2 315 29.2
BolC8t48874H Brassica oleracea HOM05D003118 ORTHO05D003618 1.7e-26 124.4 316 31.3
BraA08t35403Z Brassica rapa HOM05D003118 ORTHO05D003618 2.2e-26 124.0 355 29.0
ClCG01G002310 Citrullus lanatus HOM05D003118 ORTHO05D003618 1.1e-25 121.7 312 28.8
BraA09t41913Z Brassica rapa HOM05D003118 ORTHO05D003618 1.5e-25 121.3 314 29.3
FAN18G4078 Fragaria x ananassa HOM05D003118 ORTHO05D003618 5.5e-25 119.4 153 43.1
Hund14265 Selenicereus undatus HOM05D003118 ORTHO05D003618 7.2e-25 119.0 165 39.4
Medtr7g063200 Medicago truncatula HOM05D003118 ORTHO05D003618 2.1e-24 117.5 335 28.7
A09p65700 Brassica napus HOM05D003118 ORTHO05D003618 1.4e-23 114.8 303 28.7
TPR.G24909 Trifolium pratense HOM05D003118 ORTHO05D003618 1.4e-23 114.8 276 27.2
Sp1g07530 Schrenkiella parvula HOM05D003118 ORTHO05D003618 2.3e-23 114.0 338 29.9
Mapoly0002s0236 Marchantia polymorpha HOM05D003118 ORTHO05D003618 8.8e-23 112.1 309 25.6
AagrBONN_evm.TU.Sc2ySwM_228.3604 Anthoceros agrestis HOM05D003118 ORTHO05D003618 1.2e-22 111.7 313 28.4
Pp3c25_1090 Physcomitrium patens HOM05D003118 ORTHO05D003618 4.4e-22 109.8 330 26.1
ATR0721G124 Amborella trichopoda HOM05D003118 ORTHO05D003618 7.5e-22 109.0 159 37.7
A06p05760 Brassica napus HOM05D003118 ORTHO05D003618 7.5e-22 109.0 306 29.4
BraA06t23787Z Brassica rapa HOM05D003118 ORTHO05D003618 3.7e-21 106.7 314 29.3
ECA236G4268 Erigeron canadensis HOM05D003118 ORTHO05D003618 3.7e-21 106.7 166 36.7
Haze_08746 Corylus avellana HOM05D003118 ORTHO05D003618 1.0e-18 98.6 124 42.7
Thhalv10007035m.g Eutrema salsugineum HOM05D003118 ORTHO05D003618 1.0e-18 98.6 266 30.1
Actinidia27618 Actinidia chinensis HOM05D003118 ORTHO05D003618 4.2e-17 93.2 177 36.7
Hund14263 Selenicereus undatus HOM05D003118 ORTHO05D003618 5.5e-17 92.8 142 38.0
FAN18G3666 Fragaria x ananassa HOM05D003118 ORTHO05D003618 7.2e-17 92.4 104 41.3
BcaB07g34111 Brassica carinata HOM05D003118 ORTHO05D003618 4.4e-14 83.2 296 27.0
MBI01_g15047_MAGBIO Magnolia biondii HOM05D003118 ORTHO05D003618 1.0e-10 72.0 64 50.0
Cpa.g.sc201.12 Carica papaya HOM05D003118 ORTHO05D003618 1.7e-10 71.2 132 31.8
MBI18_g41292_MAGBIO Magnolia biondii HOM05D003118 ORTHO05D003618 2.9e-10 70.5 71 43.7
BolC5t29453H Brassica oleracea HOM05D003118 ORTHO05D032428 3.8e-10 70.1 236 26.7
FAN11G3379 Fragaria x ananassa HOM05D003118 ORTHO05D003618 1.9e-09 67.8 128 30.5
C05p06950 Brassica napus HOM05D003118 ORTHO05D003618 9.5e-09 65.5 229 26.2
Nitab4.5_0010695g0030 Nicotiana tabacum HOM05D003118 ORTHO05D003618 8.0e-08 62.4 50 68.0
Cpa.g.c33497.2 Carica papaya HOM05D003118 ORTHO05D003618 1.0e-07 62.0 59 54.2
HanXRQChr11g0344401 Helianthus annuus HOM05D003118 ORTHO05D003618 8.9e-07 58.9 126 30.2
TWI59G0290 Tripterygium wilfordii HOM05D003118 ORTHO05D003618 2.6e-06 57.4 88 38.6


User provided reference genes

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