Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen01g037570 Solanum pennellii HOM05D007580 ORTHO05D009620 2.9e-85 318.5 163 100.0
Solyc01g091790.2 Solanum lycopersicum HOM05D007580 ORTHO05D009620 1.1e-81 306.6 166 96.4
PGSC0003DMG400017056 Solanum tuberosum HOM05D007580 ORTHO05D009620 1.6e-67 259.6 170 84.7
Nitab4.5_0004550g0100 Nicotiana tabacum HOM05D007580 ORTHO05D009620 4.2e-44 181.8 188 63.3
Migut.B01687 Erythranthe guttata HOM05D007580 ORTHO05D009620 8.3e-40 167.5 176 58.5
Peaxi162Scf00021g00055 Petunia axillaris HOM05D007580 ORTHO05D009620 1.8e-39 166.4 179 59.8
QL08p050656 Quercus lobata HOM05D007580 ORTHO05D009620 8.5e-37 157.5 166 57.8
Potri.002G153000 Populus trichocarpa HOM05D007580 ORTHO05D009620 1.1e-36 157.1 160 57.5
Sabra14G0055200 Salix brachista HOM05D007580 ORTHO05D009620 3.2e-36 155.6 165 59.4
Sabra02G0121300 Salix brachista HOM05D007580 ORTHO05D009620 4.2e-36 155.2 161 58.4
Nitab4.5_0010430g0050 Nicotiana tabacum HOM05D007580 ORTHO05D009620 7.2e-36 154.5 176 58.5
Medtr7g076270 Medicago truncatula HOM05D007580 ORTHO05D009620 1.4e-34 150.2 166 53.0
TWI14G1086 Tripterygium wilfordii HOM05D007580 ORTHO05D009620 2.3e-34 149.4 162 57.4
Oeu024417.1 Olea europaea HOM05D007580 ORTHO05D009620 3.0e-34 149.1 184 55.4
Hma1.2p1_0398F.1_g143830 Hydrangea macrophylla HOM05D007580 ORTHO05D009620 4.0e-34 148.7 184 53.8
Prupe.2G154500 Prunus persica HOM05D007580 ORTHO05D009620 6.8e-34 147.9 163 54.0
Potri.014G077000 Populus trichocarpa HOM05D007580 ORTHO05D009620 8.8e-34 147.5 163 56.4
TAR003G0002 Trochodendron aralioides HOM05D007580 ORTHO05D009620 3.4e-33 145.6 166 56.0
MD07G1128600 Malus domestica HOM05D007580 ORTHO05D009620 4.4e-33 145.2 162 53.1
Aqoxy7G00453 Aquilegia oxysepala HOM05D007580 ORTHO05D009620 1.3e-32 143.7 168 53.0
TAR656G0002 Trochodendron aralioides HOM05D007580 ORTHO05D009620 1.3e-32 143.7 166 54.8
COL.COLO4_12626 Corchorus olitorius HOM05D007580 ORTHO05D009620 2.8e-32 142.5 170 51.8
TPR.G37829 Trifolium pratense HOM05D007580 ORTHO05D009620 2.8e-32 142.5 155 51.0
Gohir.A08G129400 Gossypium hirsutum HOM05D007580 ORTHO05D009620 8.3e-32 141.0 172 55.2
FAN10G2444 Fragaria x ananassa HOM05D007580 ORTHO05D009620 1.1e-31 140.6 152 53.9
Manes.01G262404 Manihot esculenta HOM05D007580 ORTHO05D009620 1.1e-31 140.6 159 54.7
FAN06G3292 Fragaria x ananassa HOM05D007580 ORTHO05D009620 1.4e-31 140.2 152 53.9
FAN06G5062 Fragaria x ananassa HOM05D007580 ORTHO05D009620 1.4e-31 140.2 152 53.9
Haze_15227 Corylus avellana HOM05D007580 ORTHO05D009620 1.8e-31 139.8 177 52.0
Gorai.004G156400 Gossypium raimondii HOM05D007580 ORTHO05D009620 1.8e-31 139.8 164 55.5
CARHR000490 Cardamine hirsuta HOM05D007580 ORTHO05D009620 2.4e-31 139.4 156 51.9
Gohir.D08G150700 Gossypium hirsutum HOM05D007580 ORTHO05D009620 2.4e-31 139.4 164 55.5
FAN03G2022 Fragaria x ananassa HOM05D007580 ORTHO05D009620 4.1e-31 138.7 154 53.2
Nn1g01349 Nelumbo nucifera HOM05D007580 ORTHO05D009620 4.1e-31 138.7 169 53.8
CSS0034624 Camellia sinensis var. sinensis HOM05D007580 ORTHO05D009620 5.4e-31 138.3 165 51.5
Duzib138G0841 Durio zibethinus HOM05D007580 ORTHO05D009620 7.0e-31 137.9 165 54.5
RcHm_v2.0_Chr1g0352211 Rosa chinensis HOM05D007580 ORTHO05D009620 1.2e-30 137.1 154 51.9
Duzib133G0099 Durio zibethinus HOM05D007580 ORTHO05D009620 2.0e-30 136.3 172 51.7
Cfa004181 Carpinus fangiana HOM05D007580 ORTHO05D009620 2.7e-30 136.0 177 50.8
Ciclev10023708m.g Citrus clementina HOM05D007580 ORTHO05D009620 1.7e-29 133.3 160 52.5
Thhalv10009990m.g Eutrema salsugineum HOM05D007580 ORTHO05D009620 1.7e-29 133.3 156 51.3
Thecc.01G368700 Theobroma cacao HOM05D007580 ORTHO05D009620 2.3e-29 132.9 171 50.9
FAN01G0874 Fragaria x ananassa HOM05D007580 ORTHO05D009620 6.6e-29 131.3 154 50.6
Carub.0001s0037 Capsella rubella HOM05D007580 ORTHO05D009620 1.5e-28 130.2 157 50.3
Manes.05G040200 Manihot esculenta HOM05D007580 ORTHO05D009620 1.5e-28 130.2 156 50.0
TAR375G0300 Trochodendron aralioides HOM05D007580 ORTHO05D009620 1.5e-28 130.2 169 51.5
AT1G01840 Arabidopsis thaliana HOM05D007580 ORTHO05D009620 2.5e-28 129.4 159 52.8
CANSAT56G4452 Cannabis sativa HOM05D007580 ORTHO05D009620 3.3e-28 129.0 159 51.6
Actinidia33444 Actinidia chinensis HOM05D007580 ORTHO05D009620 4.2e-28 128.6 156 52.6
MELO3C022528.2 Cucumis melo HOM05D007580 ORTHO05D009620 4.2e-28 128.6 161 50.3
BcaB03g13622 Brassica carinata HOM05D007580 ORTHO05D009620 9.5e-28 127.5 160 50.6
BolC5t28812H Brassica oleracea HOM05D007580 ORTHO05D009620 9.5e-28 127.5 160 50.6
Sp1g00440 Schrenkiella parvula HOM05D007580 ORTHO05D009620 9.5e-28 127.5 160 48.1
PSO782G0900 Papaver somniferum HOM05D007580 ORTHO05D009620 1.2e-27 127.1 183 48.6
A10p00190 Brassica napus HOM05D007580 ORTHO05D009620 1.6e-27 126.7 160 51.2
BraA10t42299Z Brassica rapa HOM05D007580 ORTHO05D009620 1.6e-27 126.7 159 49.7
PSO782G1514 Papaver somniferum HOM05D007580 ORTHO05D009620 1.6e-27 126.7 184 48.4
Psat0s1132g0080 Pisum sativum HOM05D007580 ORTHO05D009620 2.1e-27 126.3 173 45.7
GSVIVG01027528001 Vitis vinifera HOM05D007580 ORTHO05D009620 2.1e-27 126.3 160 48.8
AL1G10480 Arabidopsis lyrata HOM05D007580 ORTHO05D009620 4.7e-27 125.2 154 52.6
Lalb_Chr01g0021151 Lupinus albus HOM05D007580 ORTHO05D009620 4.7e-27 125.2 161 49.7
DCAR_006906 Daucus carota HOM05D007580 ORTHO05D009620 1.4e-26 123.6 166 49.4
CsaV3_6G005830 Cucumis sativus L. HOM05D007580 ORTHO05D009620 8.9e-26 120.9 165 47.9
Glyma.18G227800 Glycine max HOM05D007580 ORTHO05D009620 8.9e-26 120.9 161 49.7
PSO478G4117 Papaver somniferum HOM05D007580 ORTHO05D009620 8.9e-26 120.9 183 47.0
Sed0005443 Sechium edule HOM05D007580 ORTHO05D009620 2.0e-25 119.8 160 48.8
VMungo1383G0280 Vigna mungo HOM05D007580 ORTHO05D009620 3.4e-25 119.0 163 47.9
PGR031G3829 Punica granatum HOM05D007580 ORTHO05D009620 4.4e-25 118.6 165 45.5
CiPaw.01G053500 Carya illinoinensis HOM05D007580 ORTHO05D009620 2.8e-24 115.9 146 53.4
ClCG06G000100 Citrullus lanatus HOM05D007580 ORTHO05D009620 8.3e-24 114.4 170 47.1
Aa31LG1G11200 Aethionema arabicum HOM05D007580 ORTHO05D009620 2.4e-23 112.8 162 45.1
Lsat_1_v5_gn_7_8361 Lactuca sativa HOM05D007580 ORTHO05D009620 7.0e-23 111.3 175 46.9
C05p00230 Brassica napus HOM05D007580 ORTHO05D009620 2.7e-22 109.4 158 46.2
Ca_07865_v3 Cicer arietinum L. HOM05D007580 ORTHO05D009620 1.3e-21 107.1 162 39.5
THA.LOC104814091 Tarenaya hassleriana HOM05D007580 ORTHO05D009620 2.9e-21 105.9 155 47.1
Cpa.g.sc18.198 Carica papaya HOM05D007580 ORTHO05D009620 5.0e-21 105.1 140 53.6
CiPaw.01G052900 Carya illinoinensis HOM05D007580 ORTHO05D009620 8.6e-21 104.4 146 48.6
Phvul.008G070400 Phaseolus vulgaris HOM05D007580 ORTHO05D009620 9.5e-20 100.9 148 46.6
Sc23g0003300 Simmondsia chinensis HOM05D007580 ORTHO05D009620 9.5e-20 100.9 156 44.9
Rhsim01G0155700 Rhododendron simsii HOM05D007580 ORTHO05D009620 1.2e-19 100.5 168 44.0
Lsat_1_v5_gn_7_8421 Lactuca sativa HOM05D007580 ORTHO05D009620 2.8e-19 99.4 162 45.1
SalBow3G0911 Salvia bowleyana HOM05D007580 ORTHO05D009620 6.1e-19 98.2 177 40.7
Lj1g0023268 Lotus japonicus HOM05D007580 ORTHO05D009620 1.4e-18 97.1 161 42.2
Glyma.09G264200 Glycine max HOM05D007580 ORTHO05D009620 2.6e-17 92.8 111 48.6
HanXRQChr04g0121781 Helianthus annuus HOM05D007580 ORTHO05D009620 3.7e-16 89.0 153 39.9
MBI12_g06406_MAGBIO Magnolia biondii HOM05D007580 ORTHO05D009620 4.9e-16 88.6 157 40.1
ECA236G4638 Erigeron canadensis HOM05D007580 ORTHO05D009620 6.4e-16 88.2 176 39.2
MBI12_g45243_MAGBIO Magnolia biondii HOM05D007580 ORTHO05D009620 1.4e-15 87.0 157 40.1
SGA_v2.0_scaffold95G28871 Striga asiatica HOM05D007580 ORTHO05D009620 1.9e-15 86.7 173 41.0
Ah.05g176020 Amaranthus hybridus HOM05D007580 ORTHO05D009620 6.0e-14 81.6 157 37.6
Dinv32421 Davidia involucrata HOM05D007580 ORTHO05D009620 1.7e-13 80.1 119 43.7
vmacro20972 Vaccinium macrocarpon HOM05D007580 ORTHO05D009620 6.8e-10 68.2 146 37.7
AUR62033366 Chenopodium quinoa HOM05D007580 ORTHO05D009620 3.4e-09 65.9 106 45.3
AUR62026657 Chenopodium quinoa HOM05D007580 ORTHO05D009620 1.4e-07 60.5 138 39.1
FAN10G0406 Fragaria x ananassa HOM05D007580 ORTHO05D009620 4.1e-07 58.9 71 49.3


User provided reference genes

Program Settings