Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen01g037560 Solanum pennellii HOM05D006418 ORTHO05D008063 1.4e-198 696.0 334 100.0
Solyc01g091780.4 Solanum lycopersicum HOM05D006418 ORTHO05D008063 2.6e-197 691.8 334 99.4
PGSC0003DMG400017054 Solanum tuberosum HOM05D006418 ORTHO05D008063 3.5e-194 681.4 334 97.9
Nitab4.5_0010430g0060 Nicotiana tabacum HOM05D006418 ORTHO05D008063 3.7e-180 634.8 336 89.9
CAN.G170.50 Capsicum annuum HOM05D006418 ORTHO05D008063 2.1e-178 629.0 327 90.2
Nitab4.5_0004550g0130 Nicotiana tabacum HOM05D006418 ORTHO05D008063 3.6e-175 618.2 346 87.0
Peaxi162Scf00021g00525 Petunia axillaris HOM05D006418 ORTHO05D008063 4.9e-172 607.8 298 95.0
FvH4_7g13130 Fragaria vesca HOM05D006418 ORTHO05D008063 1.8e-158 562.8 326 80.7
FAN06G0540 Fragaria x ananassa HOM05D006418 ORTHO05D008063 1.8e-158 562.8 326 80.7
FAN06G3976 Fragaria x ananassa HOM05D006418 ORTHO05D008063 1.8e-158 562.8 326 80.7
FAN03G2411 Fragaria x ananassa HOM05D006418 ORTHO05D008063 1.2e-157 560.1 326 80.4
FAN10G2923 Fragaria x ananassa HOM05D006418 ORTHO05D008063 1.2e-157 560.1 326 80.4
Cc02_g37230 Coffea canephora HOM05D006418 ORTHO05D008063 2.0e-157 559.3 340 79.1
CANSAT56G2190 Cannabis sativa HOM05D006418 ORTHO05D008063 2.6e-157 558.9 332 78.6
Lj7A519G38 Lonicera japonica HOM05D006418 ORTHO05D008063 9.9e-157 557.0 300 86.0
vmacro13338 Vaccinium macrocarpon HOM05D006418 ORTHO05D008063 2.2e-156 555.8 298 86.2
CSS0035566 Camellia sinensis var. sinensis HOM05D006418 ORTHO05D008063 3.8e-156 555.1 328 80.5
FAN01G2003 Fragaria x ananassa HOM05D006418 ORTHO05D008063 6.4e-156 554.3 326 79.4
Duzib138G1515 Durio zibethinus HOM05D006418 ORTHO05D008063 8.4e-156 553.9 332 78.0
Rhsim07G0021100 Rhododendron simsii HOM05D006418 ORTHO05D008063 2.4e-155 552.4 335 78.2
RcHm_v2.0_Chr1g0352261 Rosa chinensis HOM05D006418 ORTHO05D008063 5.4e-155 551.2 331 78.2
GSVIVG01027527001 Vitis vinifera HOM05D006418 ORTHO05D008063 9.3e-155 550.4 335 77.6
Actinidia38288 Actinidia chinensis HOM05D006418 ORTHO05D008063 1.2e-154 550.1 325 80.3
TWI59G1449 Tripterygium wilfordii HOM05D006418 ORTHO05D008063 1.6e-154 549.7 303 84.2
TAR375G0873 Trochodendron aralioides HOM05D006418 ORTHO05D008063 2.1e-154 549.3 305 82.3
Nn1g01350 Nelumbo nucifera HOM05D006418 ORTHO05D008063 2.7e-154 548.9 305 82.0
COL.COLO4_12625 Corchorus olitorius HOM05D006418 ORTHO05D008063 1.0e-153 547.0 333 77.2
Migut.B01688 Erythranthe guttata HOM05D006418 ORTHO05D008063 1.3e-153 546.6 336 77.4
Dinv32422 Davidia involucrata HOM05D006418 ORTHO05D008063 1.7e-153 546.2 295 85.1
Hund27325 Selenicereus undatus HOM05D006418 ORTHO05D008063 3.0e-153 545.4 336 77.1
MD07G1128500 Malus domestica HOM05D006418 ORTHO05D008063 3.9e-153 545.0 333 76.9
Ciclev10021113m.g Citrus clementina HOM05D006418 ORTHO05D008063 5.1e-153 544.7 334 76.3
HanXRQChr06g0169031 Helianthus annuus HOM05D006418 ORTHO05D008063 5.1e-153 544.7 332 76.5
Gorai.007G095100 Gossypium raimondii HOM05D006418 ORTHO05D008063 8.7e-153 543.9 332 76.2
Aqoxy5G03975 Aquilegia oxysepala HOM05D006418 ORTHO05D008063 1.5e-152 543.1 303 81.2
Glyma.03G017600 Glycine max HOM05D006418 ORTHO05D008063 1.9e-152 542.7 335 77.0
Hma1.2p1_0033F.1_g020630 Hydrangea macrophylla HOM05D006418 ORTHO05D008063 1.9e-152 542.7 295 84.4
CiPaw.01G053600 Carya illinoinensis HOM05D006418 ORTHO05D008063 3.3e-152 542.0 332 77.4
EL10Ac1g00963 Beta vulgaris HOM05D006418 ORTHO05D008063 5.6e-152 541.2 336 76.5
Gohir.D11G089100 Gossypium hirsutum HOM05D006418 ORTHO05D008063 7.3e-152 540.8 332 75.9
arahy.Tifrunner.gnm1.ann1.K1NG1D Arachis hypogaea HOM05D006418 ORTHO05D008063 1.6e-151 539.7 334 77.2
THA.LOC104827683 Tarenaya hassleriana HOM05D006418 ORTHO05D008063 2.8e-151 538.9 334 76.3
ClCG05G001910 Citrullus lanatus HOM05D006418 ORTHO05D008063 3.6e-151 538.5 318 78.9
ECA236G1148 Erigeron canadensis HOM05D006418 ORTHO05D008063 6.2e-151 537.7 300 81.3
Potri.002G153100 Populus trichocarpa HOM05D006418 ORTHO05D008063 6.2e-151 537.7 307 80.8
DCAR_025170 Daucus carota HOM05D006418 ORTHO05D008063 1.4e-150 536.6 303 82.5
Lj3g0006580 Lotus japonicus HOM05D006418 ORTHO05D008063 1.4e-150 536.6 326 77.0
Eucgr.E00217 Eucalyptus grandis HOM05D006418 ORTHO05D008063 4.0e-150 535.0 334 75.4
Lalb_Chr10g0097531 Lupinus albus HOM05D006418 ORTHO05D008063 4.0e-150 535.0 319 78.1
TPR.G17586 Trifolium pratense HOM05D006418 ORTHO05D008063 1.5e-149 533.1 310 80.0
Sabra02G0121400 Salix brachista HOM05D006418 ORTHO05D008063 2.6e-149 532.3 304 79.3
CARHR171390 Cardamine hirsuta HOM05D006418 ORTHO05D008063 7.6e-149 530.8 334 76.9
Cfa004182 Carpinus fangiana HOM05D006418 ORTHO05D008063 9.9e-149 530.4 295 82.7
PGR042G1311 Punica granatum HOM05D006418 ORTHO05D008063 6.4e-148 527.7 327 77.4
VMungo0331G0376 Vigna mungo HOM05D006418 ORTHO05D008063 1.4e-147 526.6 330 75.5
PSO063G7157 Papaver somniferum HOM05D006418 ORTHO05D008063 4.2e-147 525.0 329 75.4
Aa31LG10G15180 Aethionema arabicum HOM05D006418 ORTHO05D008063 5.5e-147 524.6 334 74.9
Medtr8g032700 Medicago truncatula HOM05D006418 ORTHO05D008063 1.2e-146 523.5 330 75.5
Carub.0005s2773 Capsella rubella HOM05D006418 ORTHO05D008063 1.6e-146 523.1 334 74.9
Thhalv10006098m.g Eutrema salsugineum HOM05D006418 ORTHO05D008063 2.1e-146 522.7 334 75.1
Ca_23755_v3 Cicer arietinum L. HOM05D006418 ORTHO05D008063 4.6e-146 521.5 326 75.5
AL5G43290 Arabidopsis lyrata HOM05D006418 ORTHO05D008063 1.3e-145 520.0 334 74.0
AT3G61080 Arabidopsis thaliana HOM05D006418 ORTHO05D008063 1.8e-145 519.6 308 77.3
Zm00001eb001200 Zea mays HOM05D006418 ORTHO05D008063 3.9e-145 518.5 299 78.9
CiPaw.01G023800 Carya illinoinensis HOM05D006418 ORTHO05D008063 5.1e-145 518.1 334 74.0
Phvul.010G092700 Phaseolus vulgaris HOM05D006418 ORTHO05D008063 6.7e-145 517.7 330 73.9
Os03g0117800 Oryza sativa ssp. japonica HOM05D006418 ORTHO05D008063 1.5e-144 516.5 340 71.8
Sp5g02280 Schrenkiella parvula HOM05D006418 ORTHO05D008063 3.3e-144 515.4 334 73.7
MELO3C006151.2 Cucumis melo HOM05D006418 ORTHO05D008063 7.4e-144 514.2 360 70.0
ATR0757G200 Amborella trichopoda HOM05D006418 ORTHO05D008063 2.8e-143 512.3 323 74.6
BcaB02g07390 Brassica carinata HOM05D006418 ORTHO05D008063 3.7e-143 511.9 304 77.6
SalBow3G2367 Salvia bowleyana HOM05D006418 ORTHO05D008063 1.4e-142 510.0 320 74.7
BcaC08g45098 Brassica carinata HOM05D006418 ORTHO05D008063 5.3e-142 508.1 322 74.8
A07p25300 Brassica napus HOM05D006418 ORTHO05D008063 1.3e-140 503.4 314 75.2
BraA07t30173Z Brassica rapa HOM05D006418 ORTHO05D008063 2.2e-140 502.7 314 74.8
C06p27060 Brassica napus HOM05D006418 ORTHO05D008063 6.5e-140 501.1 329 73.3
BolC6t37878H Brassica oleracea HOM05D006418 ORTHO05D008063 6.5e-140 501.1 329 73.3
HPP92_014577 Vanilla planifolia HOM05D006418 ORTHO05D008063 2.5e-139 499.2 295 76.9
SGA_v2.0_scaffold95G28870 Striga asiatica HOM05D006418 ORTHO05D008063 2.2e-127 459.5 351 66.4
Manes.01G262400 Manihot esculenta HOM05D006418 ORTHO05D008063 2.8e-127 459.1 286 75.5
Thecc.01G368600 Theobroma cacao HOM05D006418 ORTHO05D008063 3.1e-126 455.7 289 74.0
CDE01G0065 Ceratophyllum demersum HOM05D006418 ORTHO05D008063 1.5e-125 453.4 287 73.5
Oeu024416.1 Olea europaea HOM05D006418 ORTHO05D008063 1.5e-125 453.4 295 74.6
Atru.chr5.403 Acer truncatum HOM05D006418 ORTHO05D008063 2.6e-125 452.6 272 78.3
AUR62004291 Chenopodium quinoa HOM05D006418 ORTHO05D008063 2.9e-124 449.1 252 81.0
Lsat_1_v5_gn_7_8501 Lactuca sativa HOM05D006418 ORTHO05D008063 6.1e-122 441.4 263 77.9
Psat4g151800 Pisum sativum HOM05D006418 ORTHO05D008063 1.4e-121 440.3 260 76.5
AagrBONN_evm.TU.Sc2ySwM_344.2134 Anthoceros agrestis HOM05D006418 ORTHO05D008063 2.3e-121 439.5 298 67.4
Prupe.2G154600 Prunus persica HOM05D006418 ORTHO05D008063 2.3e-121 439.5 241 81.7
Mapoly0138s0005 Marchantia polymorpha HOM05D006418 ORTHO05D008063 1.1e-120 437.2 292 68.8
CsaV3_3G009310 Cucumis sativus L. HOM05D006418 ORTHO05D008063 9.7e-120 434.1 241 81.7
Pp3c15_5030 Physcomitrium patens HOM05D006418 ORTHO05D008063 1.2e-117 427.2 326 63.2
Sed0024588 Sechium edule HOM05D006418 ORTHO05D008063 1.7e-116 423.3 241 79.7
CBR_g38943 Chara braunii HOM05D006418 ORTHO05D008063 1.4e-115 420.2 292 65.4
QL08p050652 Quercus lobata HOM05D006418 ORTHO05D008063 2.7e-114 416.0 261 77.4
SMO356G0133 Selaginella moellendorffii HOM05D006418 ORTHO05D008063 5.7e-112 408.3 291 64.3
Cpa.g.sc18.197 Carica papaya HOM05D006418 ORTHO05D008063 2.2e-108 396.4 252 75.0
Cc02_g37660 Coffea canephora HOM05D006418 ORTHO05D008063 6.1e-98 361.7 208 79.8
unitig_22.g5367 Utricularia gibba HOM05D006418 ORTHO05D008063 6.8e-97 358.2 204 77.5
MBI12_g25033_MAGBIO Magnolia biondii HOM05D006418 ORTHO05D008063 1.3e-92 344.0 258 67.1
Gohir.A11G085000 Gossypium hirsutum HOM05D006418 ORTHO05D008063 1.1e-91 340.9 182 80.8
Hma1.2p1_0033F.1_g020640 Hydrangea macrophylla HOM05D006418 ORTHO05D008063 2.3e-89 333.2 240 69.6
SEGI_14549 Sequoiadendron giganteum HOM05D006418 ORTHO05D008063 6.4e-71 271.9 170 72.9
Cre12.g542202 Chlamydomonas reinhardtii HOM05D006418 ORTHO05D008063 4.1e-70 269.2 297 47.8
MCO14G366 Micromonas commoda HOM05D006418 ORTHO05D008063 7.0e-70 268.5 297 48.5
Sc26g0001060 Simmondsia chinensis HOM05D001335 ORTHO05D001184 9.5e-67 258.1 184 69.0
FAN10G0301 Fragaria x ananassa HOM05D006418 ORTHO05D008063 1.3e-63 247.7 195 64.6
arahy.Tifrunner.gnm1.ann1.N7AMXP Arachis hypogaea HOM05D006418 ORTHO05D008063 7.1e-62 241.9 173 73.4
Haze_15226 Corylus avellana HOM05D006418 ORTHO05D008063 1.3e-60 237.7 138 83.3
PRCOL_00000121 Prasinoderma coloniale HOM05D006418 ORTHO05D008063 4.7e-58 229.2 311 42.1
Glyma.07G078900 Glycine max HOM05D006418 ORTHO05D008063 6.0e-45 185.7 187 57.8
Sc26g0001070 Simmondsia chinensis HOM05D006418 ORTHO05D008063 1.7e-44 184.1 136 69.9
Gohir.A11G084900 Gossypium hirsutum HOM05D006418 ORTHO05D008063 3.9e-44 183.0 132 69.7
Pp3c1_6480 Physcomitrium patens HOM05D006418 ORTHO05D008063 6.6e-44 182.2 277 37.9
Sabra14G0055300 Salix brachista HOM05D006418 ORTHO05D008063 1.9e-43 180.6 287 40.4
Ca_28970_v3 Cicer arietinum L. HOM05D006418 ORTHO05D008063 2.8e-34 150.2 273 35.9
ATR0620G127 Amborella trichopoda HOM05D006418 ORTHO05D008063 1.8e-28 131.0 157 43.3
Cfa024407 Carpinus fangiana HOM05D006418 ORTHO05D008063 2.5e-27 127.1 277 32.1
unitig_22.g5366 Utricularia gibba HOM05D003447 ORTHO05D003967 2.6e-24 117.1 97 63.9
CiPaw.01G052800 Carya illinoinensis HOM05D006418 ORTHO05D008063 3.7e-18 96.7 86 59.3
Cc00_g22860 Coffea canephora HOM05D006418 ORTHO05D008063 9.0e-17 92.0 57 77.2
SEGI_36912 Sequoiadendron giganteum HOM05D006418 ORTHO05D008063 1.1e-11 75.1 92 47.8
Actinidia27830 Actinidia chinensis HOM05D006418 ORTHO05D008063 4.3e-11 73.2 41 75.6
MBI16_g15528_MAGBIO Magnolia biondii HOM05D006418 ORTHO05D008063 3.1e-09 67.0 42 71.4
Peaxi162Scf00786g00028 Petunia axillaris HOM05D014441 ORTHO05D016353 1.7e-07 61.2 30 86.7


User provided reference genes

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