Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen01g036900 Solanum pennellii HOM05D006696 ORTHO05D008683 2.8e-118 428.7 229 100.0
Solyc01g091130.4 Solanum lycopersicum HOM05D006696 ORTHO05D008683 8.5e-83 310.8 259 72.2
PGSC0003DMG400025962 Solanum tuberosum HOM05D006696 ORTHO05D008683 1.1e-82 310.5 262 67.9
Sopen01g036880 Solanum pennellii HOM05D006696 ORTHO05D008683 7.9e-81 304.3 259 69.9
Nitab4.5_0010616g0010 Nicotiana tabacum HOM05D006696 ORTHO05D008683 2.9e-75 285.8 270 60.0
Nitab4.5_0000457g0140 Nicotiana tabacum HOM05D006696 ORTHO05D008683 4.2e-74 282.0 210 70.0
CAN.G388.34 Capsicum annuum HOM05D006696 ORTHO05D008683 9.4e-74 280.8 215 67.9
HanXRQChr03g0093971 Helianthus annuus HOM05D006696 ORTHO05D008683 3.2e-66 255.8 179 68.2
Peaxi162Scf00013g03019 Petunia axillaris HOM05D006696 ORTHO05D008683 5.5e-66 255.0 214 62.6
Thecc.08G173400 Theobroma cacao HOM05D006696 ORTHO05D008683 9.4e-66 254.2 221 59.3
Duzib177G0277 Durio zibethinus HOM05D006696 ORTHO05D008683 6.8e-64 248.1 214 59.3
Lsat_1_v5_gn_3_132380 Lactuca sativa HOM05D006696 ORTHO05D008683 1.2e-63 247.3 183 67.2
COL.COLO4_24599 Corchorus olitorius HOM05D006696 ORTHO05D008683 3.4e-63 245.7 223 57.0
MELO3C006203.2 Cucumis melo HOM05D006696 ORTHO05D008683 5.7e-63 245.0 228 57.0
MD07G1119000 Malus domestica HOM05D006696 ORTHO05D008683 5.7e-63 245.0 221 57.0
Gohir.D13G120600 Gossypium hirsutum HOM05D006696 ORTHO05D008683 7.5e-63 244.6 218 57.8
Gorai.013G134800 Gossypium raimondii HOM05D006696 ORTHO05D008683 7.5e-63 244.6 218 57.8
Cpa.g.sc611.2 Carica papaya HOM05D006696 ORTHO05D008683 9.7e-63 244.2 223 56.5
CsaV3_3G009820 Cucumis sativus L. HOM05D006696 ORTHO05D008683 1.3e-62 243.8 228 56.6
ClCG05G002380 Citrullus lanatus HOM05D006696 ORTHO05D008683 2.2e-62 243.0 220 57.3
CSS0014714 Camellia sinensis var. sinensis HOM05D006696 ORTHO05D008683 4.8e-62 241.9 227 55.5
CSS0026641 Camellia sinensis var. sinensis HOM05D006696 ORTHO05D008683 4.8e-62 241.9 227 55.5
Hma1.2p1_0301F.1_g118560 Hydrangea macrophylla HOM05D006696 ORTHO05D008683 4.8e-62 241.9 216 59.3
Gohir.A13G117300 Gossypium hirsutum HOM05D006696 ORTHO05D008683 6.3e-62 241.5 218 56.9
Sed0011228 Sechium edule HOM05D006696 ORTHO05D008683 8.3e-62 241.1 217 57.1
THA.LOC104814083 Tarenaya hassleriana HOM05D006696 ORTHO05D008683 8.3e-62 241.1 188 62.2
VMungo0331G0021 Vigna mungo HOM05D006696 ORTHO05D008683 8.3e-62 241.1 185 62.7
CiPaw.01G264000 Carya illinoinensis HOM05D006696 ORTHO05D008683 1.1e-61 240.7 231 54.5
QL08p052869 Quercus lobata HOM05D006696 ORTHO05D008683 1.8e-61 240.0 225 56.0
Aa31LG1G11340 Aethionema arabicum HOM05D006696 ORTHO05D008683 2.4e-61 239.6 178 65.2
Manes.01G267400 Manihot esculenta HOM05D006696 ORTHO05D008683 3.1e-61 239.2 218 57.3
Ca_19926_v3 Cicer arietinum L. HOM05D006696 ORTHO05D008683 5.3e-61 238.4 182 62.6
Prupe.2G142200 Prunus persica HOM05D006696 ORTHO05D008683 5.3e-61 238.4 217 57.6
Psat7g231000 Pisum sativum HOM05D006696 ORTHO05D008683 7.0e-61 238.0 178 64.0
RcHm_v2.0_Chr1g0349711 Rosa chinensis HOM05D006696 ORTHO05D008683 7.0e-61 238.0 220 55.5
Lalb_Chr07g0189961 Lupinus albus HOM05D006696 ORTHO05D008683 9.1e-61 237.7 182 63.7
vmacro21023 Vaccinium macrocarpon HOM05D006696 ORTHO05D008683 9.1e-61 237.7 265 49.4
MSTRG.20736 Avicennia marina HOM05D006696 ORTHO05D008683 1.6e-60 236.9 216 56.9
Lj7C531T6 Lonicera japonica HOM05D006696 ORTHO05D008683 2.0e-60 236.5 209 58.4
Sabra02G0113800 Salix brachista HOM05D006696 ORTHO05D008683 2.0e-60 236.5 216 56.5
Phvul.010G081400 Phaseolus vulgaris HOM05D006696 ORTHO05D008683 2.7e-60 236.1 185 60.5
Medtr4g025130 Medicago truncatula HOM05D006696 ORTHO05D008683 4.5e-60 235.3 188 61.7
Oeu037929.1 Olea europaea HOM05D006696 ORTHO05D008683 4.5e-60 235.3 181 63.5
Glyma.03G028100 Glycine max HOM05D006696 ORTHO05D008683 5.9e-60 235.0 182 62.6
Lj3g0014279 Lotus japonicus HOM05D006696 ORTHO05D008683 5.9e-60 235.0 211 57.3
Potri.002G146100 Populus trichocarpa HOM05D006696 ORTHO05D008683 5.9e-60 235.0 216 56.9
TAR629G0060 Trochodendron aralioides HOM05D006696 ORTHO05D008683 5.9e-60 235.0 219 55.7
TPR.G7586 Trifolium pratense HOM05D006696 ORTHO05D008683 1.3e-59 233.8 185 61.6
Cc02_g24120 Coffea canephora HOM05D006696 ORTHO05D008683 1.7e-59 233.4 216 55.6
Migut.B01614 Erythranthe guttata HOM05D006696 ORTHO05D008683 1.7e-59 233.4 218 55.5
Sp1g37340 Schrenkiella parvula HOM05D006696 ORTHO05D008683 2.9e-59 232.6 220 55.5
A06p03080 Brassica napus HOM05D006696 ORTHO05D008683 8.5e-59 231.1 219 55.7
Haze_16792 Corylus avellana HOM05D006696 ORTHO05D008683 8.5e-59 231.1 224 53.6
Eucgr.D02468 Eucalyptus grandis HOM05D006696 ORTHO05D008683 8.5e-59 231.1 227 53.7
FAN06G3694 Fragaria x ananassa HOM05D006696 ORTHO05D008683 8.5e-59 231.1 184 60.9
Nn6g34076 Nelumbo nucifera HOM05D006696 ORTHO05D008683 8.5e-59 231.1 222 52.7
SGA_v2.0_scaffold95G28911 Striga asiatica HOM05D006696 ORTHO05D008683 1.1e-58 230.7 218 55.0
C06p05680 Brassica napus HOM05D006696 ORTHO05D008683 2.5e-58 229.6 220 55.0
FvH4_7g11430 Fragaria vesca HOM05D006696 ORTHO05D008683 2.5e-58 229.6 216 54.6
FAN01G1519 Fragaria x ananassa HOM05D006696 ORTHO05D008683 2.5e-58 229.6 216 54.6
FAN06G1977 Fragaria x ananassa HOM05D006696 ORTHO05D008683 2.5e-58 229.6 216 54.6
Rhsim01G0149400 Rhododendron simsii HOM05D006696 ORTHO05D008683 2.5e-58 229.6 221 54.8
BraA06t23521Z Brassica rapa HOM05D006696 ORTHO05D008683 4.2e-58 228.8 214 56.1
TWI14G1225 Tripterygium wilfordii HOM05D006696 ORTHO05D008683 4.2e-58 228.8 217 54.8
BcaC08g43220 Brassica carinata HOM05D006696 ORTHO05D008683 5.5e-58 228.4 220 55.0
BolC6t35679H Brassica oleracea HOM05D006696 ORTHO05D008683 5.5e-58 228.4 220 55.0
CARHR000330 Cardamine hirsuta HOM05D006696 ORTHO05D008683 9.4e-58 227.6 178 63.5
Thhalv10007140m.g Eutrema salsugineum HOM05D006696 ORTHO05D008683 9.4e-58 227.6 181 63.0
Atru.chr5.281 Acer truncatum HOM05D006696 ORTHO05D008683 1.2e-57 227.3 229 52.8
unitig_22.g5383 Utricularia gibba HOM05D006696 ORTHO05D008683 1.2e-57 227.3 214 53.7
AT1G02020 Arabidopsis thaliana HOM05D006696 ORTHO05D008683 1.6e-57 226.9 183 61.2
BcaB07g33486 Brassica carinata HOM05D006696 ORTHO05D008683 2.1e-57 226.5 187 60.4
FAN03G1153 Fragaria x ananassa HOM05D006696 ORTHO05D008683 4.7e-57 225.3 216 54.2
Carub.0001s0021 Capsella rubella HOM05D006696 ORTHO05D008683 1.0e-56 224.2 179 62.0
SalBow5G3816 Salvia bowleyana HOM05D006696 ORTHO05D008683 1.0e-56 224.2 214 54.2
AL1G10260 Arabidopsis lyrata HOM05D006696 ORTHO05D008683 1.4e-56 223.8 183 61.7
PSO478G1798 Papaver somniferum HOM05D006696 ORTHO05D008683 1.8e-56 223.4 179 60.3
Aqoxy7G00691 Aquilegia oxysepala HOM05D006696 ORTHO05D008683 3.0e-56 222.6 227 51.5
EL10Ac1g00866 Beta vulgaris HOM05D006696 ORTHO05D008683 3.0e-56 222.6 223 52.9
Ciclev10019231m.g Citrus clementina HOM05D006696 ORTHO05D008683 4.0e-56 222.2 227 52.0
MBI12_g20403_MAGBIO Magnolia biondii HOM05D006696 ORTHO05D008683 5.2e-56 221.9 218 52.8
CDE04G1815 Ceratophyllum demersum HOM05D006696 ORTHO05D008683 6.8e-56 221.5 219 52.1
Sc26g0001290 Simmondsia chinensis HOM05D006696 ORTHO05D008683 6.8e-56 221.5 202 56.9
Hund27369 Selenicereus undatus HOM05D006696 ORTHO05D008683 1.5e-55 220.3 223 52.5
PSO782G1103 Papaver somniferum HOM05D006696 ORTHO05D008683 3.4e-55 219.2 182 58.2
arahy.Tifrunner.gnm1.ann1.30BUB6 Arachis hypogaea HOM05D006696 ORTHO05D008683 5.7e-55 218.4 220 52.3
arahy.Tifrunner.gnm1.ann1.PBYD8I Arachis hypogaea HOM05D006696 ORTHO05D008683 5.7e-55 218.4 220 52.3
AUR62004189 Chenopodium quinoa HOM05D006696 ORTHO05D008683 6.3e-54 214.9 214 52.3
AUR62013656 Chenopodium quinoa HOM05D006696 ORTHO05D008683 4.1e-53 212.2 181 57.5
ECA232G1408 Erigeron canadensis HOM05D006696 ORTHO05D008683 4.1e-53 212.2 211 51.7
SEGI_31859 Sequoiadendron giganteum HOM05D006696 ORTHO05D008683 8.6e-51 204.5 212 50.0
SMO011G0006 Selaginella moellendorffii HOM05D006696 ORTHO05D008683 5.5e-50 201.8 187 54.0
Ah.05g174590 Amaranthus hybridus HOM05D006696 ORTHO05D008683 6.1e-49 198.4 223 47.5
Solyc01g091140.4 Solanum lycopersicum HOM05D006696 ORTHO05D008683 8.0e-49 198.0 102 93.1
Mapoly0117s0009 Marchantia polymorpha HOM05D006696 ORTHO05D008683 1.8e-48 196.8 208 51.4
ATR0041G020 Amborella trichopoda HOM05D006696 ORTHO05D008683 7.5e-47 191.4 172 55.8
HPP92_022287 Vanilla planifolia HOM05D006696 ORTHO05D008683 3.7e-46 189.1 226 46.0
GSVIVG01027661001 Vitis vinifera HOM05D006696 ORTHO05D008683 8.3e-46 188.0 209 50.7
AagrBONN_evm.TU.Sc2ySwM_228.1723 Anthoceros agrestis HOM05D006696 ORTHO05D008683 1.0e-43 181.0 186 51.6
Pp3c18_8320 Physcomitrium patens HOM05D006696 ORTHO05D008683 3.9e-43 179.1 184 50.5
Os10g0190800 Oryza sativa ssp. japonica HOM05D006696 ORTHO05D008683 4.7e-33 145.6 210 42.9
Zm00001eb145800 Zea mays HOM05D006696 ORTHO05D008683 8.9e-32 141.4 208 42.3
Actinidia33475 Actinidia chinensis HOM05D006696 ORTHO05D008683 2.8e-17 93.2 185 36.8
Phvul.010G066778 Phaseolus vulgaris HOM05D006696 ORTHO05D008683 7.3e-10 68.6 49 57.1


User provided reference genes

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