Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen01g036890 Solanum pennellii HOM05D006696 ORTHO05D008683 2.4e-40 168.3 80 100.0
Sopen01g036880 Solanum pennellii HOM05D006696 ORTHO05D008683 7.7e-31 136.7 80 82.5
PGSC0003DMG400025962 Solanum tuberosum HOM05D006696 ORTHO05D008683 1.7e-30 135.6 80 82.5
Solyc01g091130.4 Solanum lycopersicum HOM05D006696 ORTHO05D008683 2.9e-30 134.8 80 82.5
CAN.G388.34 Capsicum annuum HOM05D006696 ORTHO05D008683 3.8e-30 134.4 80 82.5
Nitab4.5_0010616g0010 Nicotiana tabacum HOM05D006696 ORTHO05D008683 2.5e-29 131.7 80 80.0
Nitab4.5_0000457g0140 Nicotiana tabacum HOM05D006696 ORTHO05D008683 3.2e-29 131.3 80 78.8
SGA_v2.0_scaffold95G28911 Striga asiatica HOM05D006696 ORTHO05D008683 7.2e-29 130.2 80 77.5
Sabra02G0113800 Salix brachista HOM05D006696 ORTHO05D008683 9.4e-29 129.8 80 76.2
Peaxi162Scf00013g03019 Petunia axillaris HOM05D006696 ORTHO05D008683 1.6e-28 129.0 80 77.5
Ciclev10019231m.g Citrus clementina HOM05D006696 ORTHO05D008683 2.1e-28 128.6 80 77.5
ECA232G1408 Erigeron canadensis HOM05D006696 ORTHO05D008683 2.1e-28 128.6 80 77.5
FAN06G1977 Fragaria x ananassa HOM05D006696 ORTHO05D008683 2.7e-28 128.3 80 73.8
Gohir.A13G117300 Gossypium hirsutum HOM05D006696 ORTHO05D008683 2.7e-28 128.3 80 76.2
Gohir.D13G120600 Gossypium hirsutum HOM05D006696 ORTHO05D008683 2.7e-28 128.3 80 76.2
Gorai.013G134800 Gossypium raimondii HOM05D006696 ORTHO05D008683 2.7e-28 128.3 80 76.2
Potri.002G146100 Populus trichocarpa HOM05D006696 ORTHO05D008683 2.7e-28 128.3 80 75.0
RcHm_v2.0_Chr1g0349711 Rosa chinensis HOM05D006696 ORTHO05D008683 2.7e-28 128.3 80 75.0
CSS0014714 Camellia sinensis var. sinensis HOM05D006696 ORTHO05D008683 3.6e-28 127.9 80 77.5
AUR62004189 Chenopodium quinoa HOM05D006696 ORTHO05D008683 3.6e-28 127.9 80 76.2
AUR62013656 Chenopodium quinoa HOM05D006696 ORTHO05D008683 3.6e-28 127.9 80 76.2
Cc02_g24120 Coffea canephora HOM05D006696 ORTHO05D008683 3.6e-28 127.9 80 75.0
DCAR_015916 Daucus carota HOM05D006696 ORTHO05D008683 3.6e-28 127.9 78 74.4
Duzib177G0277 Durio zibethinus HOM05D006696 ORTHO05D008683 3.6e-28 127.9 80 75.0
CSS0026641 Camellia sinensis var. sinensis HOM05D006696 ORTHO05D008683 4.6e-28 127.5 80 76.2
COL.COLO4_24599 Corchorus olitorius HOM05D006696 ORTHO05D008683 4.6e-28 127.5 80 75.0
Prupe.2G142200 Prunus persica HOM05D006696 ORTHO05D008683 4.6e-28 127.5 80 76.2
TAR629G0060 Trochodendron aralioides HOM05D006696 ORTHO05D008683 4.6e-28 127.5 80 75.0
Manes.01G267400 Manihot esculenta HOM05D006696 ORTHO05D008683 6.1e-28 127.1 80 76.2
Migut.B01614 Erythranthe guttata HOM05D006696 ORTHO05D008683 7.9e-28 126.7 79 73.4
Sed0011228 Sechium edule HOM05D006696 ORTHO05D008683 7.9e-28 126.7 80 75.0
TWI14G1225 Tripterygium wilfordii HOM05D006696 ORTHO05D008683 7.9e-28 126.7 80 75.0
Hma1.2p1_0301F.1_g118560 Hydrangea macrophylla HOM05D006696 ORTHO05D008683 1.0e-27 126.3 80 73.8
Atru.chr5.281 Acer truncatum HOM05D006696 ORTHO05D008683 1.4e-27 125.9 80 73.8
Eucgr.D02468 Eucalyptus grandis HOM05D006696 ORTHO05D008683 1.4e-27 125.9 80 75.0
MD07G1119000 Malus domestica HOM05D006696 ORTHO05D008683 1.4e-27 125.9 80 73.8
Aa31LG1G11340 Aethionema arabicum HOM05D006696 ORTHO05D008683 1.8e-27 125.6 80 73.8
CiPaw.01G264000 Carya illinoinensis HOM05D006696 ORTHO05D008683 1.8e-27 125.6 80 72.5
FvH4_7g11430 Fragaria vesca HOM05D006696 ORTHO05D008683 1.8e-27 125.6 80 72.5
FAN01G1519 Fragaria x ananassa HOM05D006696 ORTHO05D008683 1.8e-27 125.6 80 72.5
FAN03G1153 Fragaria x ananassa HOM05D006696 ORTHO05D008683 1.8e-27 125.6 80 72.5
CANSAT21G0759 Cannabis sativa HOM05D006696 ORTHO05D008683 2.3e-27 125.2 80 73.8
HanXRQChr03g0093971 Helianthus annuus HOM05D006696 ORTHO05D008683 2.3e-27 125.2 80 76.2
ClCG05G002380 Citrullus lanatus HOM05D006696 ORTHO05D008683 3.0e-27 124.8 80 75.0
Medtr4g025130 Medicago truncatula HOM05D006696 ORTHO05D008683 3.0e-27 124.8 80 75.0
Thecc.08G173400 Theobroma cacao HOM05D006696 ORTHO05D008683 3.0e-27 124.8 80 72.5
Lalb_Chr07g0189961 Lupinus albus HOM05D006696 ORTHO05D008683 3.9e-27 124.4 80 73.8
Ah.05g174590 Amaranthus hybridus HOM05D006696 ORTHO05D008683 5.1e-27 124.0 80 73.8
Lsat_1_v5_gn_3_132380 Lactuca sativa HOM05D006696 ORTHO05D008683 5.1e-27 124.0 80 72.5
Lj7C531T6 Lonicera japonica HOM05D006696 ORTHO05D008683 5.1e-27 124.0 80 72.5
CsaV3_3G009820 Cucumis sativus L. HOM05D006696 ORTHO05D008683 6.7e-27 123.6 80 73.8
Glyma.03G028100 Glycine max HOM05D006696 ORTHO05D008683 6.7e-27 123.6 80 72.5
unitig_22.g5383 Utricularia gibba HOM05D006696 ORTHO05D008683 6.7e-27 123.6 80 73.8
MSTRG.20736 Avicennia marina HOM05D006696 ORTHO05D008683 8.8e-27 123.2 80 71.2
EL10Ac1g00866 Beta vulgaris HOM05D006696 ORTHO05D008683 8.8e-27 123.2 80 75.0
CARHR000320 Cardamine hirsuta HOM05D006696 ORTHO05D008683 8.8e-27 123.2 80 71.2
FAN06G3694 Fragaria x ananassa HOM05D006696 ORTHO05D008683 8.8e-27 123.2 80 71.2
Nn6g34076 Nelumbo nucifera HOM05D006696 ORTHO05D008683 8.8e-27 123.2 80 73.8
Sp1g37340 Schrenkiella parvula HOM05D006696 ORTHO05D008683 1.1e-26 122.9 80 71.2
VMungo0331G0021 Vigna mungo HOM05D006696 ORTHO05D008683 1.1e-26 122.9 80 72.5
Psat7g231000 Pisum sativum HOM05D006696 ORTHO05D008683 1.5e-26 122.5 80 73.8
Aqoxy7G00691 Aquilegia oxysepala HOM05D006696 ORTHO05D008683 2.0e-26 122.1 80 72.5
arahy.Tifrunner.gnm1.ann1.30BUB6 Arachis hypogaea HOM05D006696 ORTHO05D008683 2.0e-26 122.1 80 71.2
arahy.Tifrunner.gnm1.ann1.PBYD8I Arachis hypogaea HOM05D006696 ORTHO05D008683 2.0e-26 122.1 80 71.2
BcaB07g33486 Brassica carinata HOM05D006696 ORTHO05D008683 2.0e-26 122.1 80 70.0
BcaC08g43220 Brassica carinata HOM05D006696 ORTHO05D008683 2.0e-26 122.1 80 70.0
A06p03080 Brassica napus HOM05D006696 ORTHO05D008683 2.0e-26 122.1 80 70.0
C06p05680 Brassica napus HOM05D006696 ORTHO05D008683 2.0e-26 122.1 80 70.0
BolC6t35679H Brassica oleracea HOM05D006696 ORTHO05D008683 2.0e-26 122.1 80 70.0
BraA06t23521Z Brassica rapa HOM05D006696 ORTHO05D008683 2.0e-26 122.1 80 70.0
Haze_16792 Corylus avellana HOM05D006696 ORTHO05D008683 2.0e-26 122.1 80 72.5
Rhsim01G0149400 Rhododendron simsii HOM05D006696 ORTHO05D008683 2.0e-26 122.1 80 73.8
TPR.G7586 Trifolium pratense HOM05D006696 ORTHO05D008683 2.0e-26 122.1 80 73.8
Ca_19926_v3 Cicer arietinum L. HOM05D006696 ORTHO05D008683 2.5e-26 121.7 80 72.5
Dinv32364 Davidia involucrata HOM05D006696 ORTHO05D008683 2.5e-26 121.7 80 72.5
Phvul.010G081400 Phaseolus vulgaris HOM05D006696 ORTHO05D008683 2.5e-26 121.7 80 71.2
THA.LOC104814083 Tarenaya hassleriana HOM05D006696 ORTHO05D008683 2.5e-26 121.7 80 71.2
QL08p052869 Quercus lobata HOM05D006696 ORTHO05D008683 3.3e-26 121.3 78 73.1
HPP92_022287 Vanilla planifolia HOM05D006696 ORTHO05D008683 3.3e-26 121.3 80 72.5
GSVIVG01027661001 Vitis vinifera HOM05D006696 ORTHO05D008683 3.3e-26 121.3 80 71.2
Thhalv10007140m.g Eutrema salsugineum HOM05D006696 ORTHO05D008683 4.3e-26 120.9 80 68.8
MELO3C006203.2 Cucumis melo HOM05D006696 ORTHO05D008683 5.7e-26 120.6 76 73.7
Carub.0001s0021 Capsella rubella HOM05D006696 ORTHO05D008683 7.4e-26 120.2 76 71.1
CDE04G1815 Ceratophyllum demersum HOM05D006696 ORTHO05D008683 7.4e-26 120.2 80 71.2
PSO782G1103 Papaver somniferum HOM05D006696 ORTHO05D008683 7.4e-26 120.2 80 71.2
Hund27369 Selenicereus undatus HOM05D006696 ORTHO05D008683 1.3e-25 119.4 75 74.7
AL1G10260 Arabidopsis lyrata HOM05D006696 ORTHO05D008683 2.2e-25 118.6 76 71.1
AT1G02020 Arabidopsis thaliana HOM05D006696 ORTHO05D008683 2.2e-25 118.6 76 71.1
MBI12_g20403_MAGBIO Magnolia biondii HOM05D006696 ORTHO05D008683 2.2e-25 118.6 80 70.0
Os10g0190800 Oryza sativa ssp. japonica HOM05D006696 ORTHO05D008683 4.8e-25 117.5 80 71.2
Zm00001eb145800 Zea mays HOM05D006696 ORTHO05D008683 8.2e-25 116.7 80 68.8
PSO478G1798 Papaver somniferum HOM05D006696 ORTHO05D008683 1.8e-24 115.5 80 70.0
AagrBONN_evm.TU.Sc2ySwM_228.1723 Anthoceros agrestis HOM05D006696 ORTHO05D008683 1.5e-23 112.5 76 69.7
Actinidia33475 Actinidia chinensis HOM05D006696 ORTHO05D008683 7.7e-23 110.2 114 53.5
ATR0041G020 Amborella trichopoda HOM05D006696 ORTHO05D008683 1.3e-22 109.4 80 65.0
Pp3c18_8320 Physcomitrium patens HOM05D006696 ORTHO05D008683 2.5e-21 105.1 75 62.7
Mapoly0117s0009 Marchantia polymorpha HOM05D006696 ORTHO05D008683 1.2e-20 102.8 80 58.8
SMO011G0006 Selaginella moellendorffii HOM05D006696 ORTHO05D008683 1.2e-20 102.8 73 65.8
Solyc01g091140.4 Solanum lycopersicum HOM05D006696 ORTHO05D008683 1.8e-16 89.0 43 95.3
SalBow5G1567 Salvia bowleyana HOM05D006696 ORTHO05D008683 2.4e-16 88.6 43 95.3
vmacro21023 Vaccinium macrocarpon HOM05D006696 ORTHO05D008683 1.2e-15 86.3 165 35.8
Atru.chr4.903 Acer truncatum HOM05D006696 ORTHO05D030753 1.4e-08 62.8 37 73.0


User provided reference genes

Program Settings