Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen01g036620 Solanum pennellii HOM05D006638 ORTHO05D008246 7.7e-121 437.2 225 100.0
Solyc01g090880.3 Solanum lycopersicum HOM05D006638 ORTHO05D008246 4.4e-116 421.4 225 97.8
PGSC0003DMG400025975 Solanum tuberosum HOM05D006638 ORTHO05D008246 2.4e-114 415.6 225 96.0
Nitab4.5_0011151g0010 Nicotiana tabacum HOM05D006638 ORTHO05D008246 6.1e-102 374.4 225 87.1
Nitab4.5_0000859g0190 Nicotiana tabacum HOM05D006638 ORTHO05D008246 2.4e-98 362.5 225 85.3
CAN.G1872.5 Capsicum annuum HOM05D006638 ORTHO05D008246 4.3e-95 351.7 204 89.2
Peaxi162Scf00803g00218 Petunia axillaris HOM05D006638 ORTHO05D008246 2.1e-86 322.8 224 78.1
Hma1.2p1_0001F.1_g001240 Hydrangea macrophylla HOM05D006638 ORTHO05D008246 4.9e-75 285.0 187 74.3
Dinv44116 Davidia involucrata HOM05D006638 ORTHO05D008246 6.4e-75 284.6 233 63.9
FvH4_7g11040 Fragaria vesca HOM05D006638 ORTHO05D008246 3.2e-74 282.3 211 69.7
FAN06G4764 Fragaria x ananassa HOM05D006638 ORTHO05D008246 1.6e-73 280.0 196 73.0
Nn2g12739 Nelumbo nucifera HOM05D006638 ORTHO05D008246 3.5e-73 278.9 215 65.1
FAN10G2039 Fragaria x ananassa HOM05D006638 ORTHO05D008246 7.8e-73 277.7 196 72.4
Rhsim05G0215700 Rhododendron simsii HOM05D006638 ORTHO05D008246 7.8e-73 277.7 199 70.4
FAN10G1288 Fragaria x ananassa HOM05D006638 ORTHO05D008246 1.0e-72 277.3 196 72.4
RcHm_v2.0_Chr1g0349031 Rosa chinensis HOM05D006638 ORTHO05D008246 1.0e-72 277.3 196 71.9
FAN03G2254 Fragaria x ananassa HOM05D006638 ORTHO05D008246 1.3e-72 276.9 196 71.9
Prupe.2G137100 Prunus persica HOM05D006638 ORTHO05D008246 2.3e-72 276.2 219 63.9
HanXRQChr12g0384211 Helianthus annuus HOM05D006638 ORTHO05D008246 5.1e-72 275.0 216 65.3
Lalb_Chr07g0190301 Lupinus albus HOM05D006638 ORTHO05D008246 5.1e-72 275.0 191 71.2
Haze_02520 Corylus avellana HOM05D006638 ORTHO05D008246 6.6e-72 274.6 219 63.9
Migut.N01611 Erythranthe guttata HOM05D006638 ORTHO05D008246 1.5e-71 273.5 196 69.9
arahy.Tifrunner.gnm1.ann1.WQW1G6 Arachis hypogaea HOM05D006638 ORTHO05D008246 1.9e-71 273.1 184 73.4
Atru.chr5.234 Acer truncatum HOM05D006638 ORTHO05D008246 2.5e-71 272.7 184 73.4
Lj7A537T49 Lonicera japonica HOM05D006638 ORTHO05D008246 2.5e-71 272.7 191 73.3
PSO170G5140 Papaver somniferum HOM05D006638 ORTHO05D008246 2.5e-71 272.7 209 64.1
Atru.BG.68.p Acer truncatum HOM05D006638 ORTHO05D008246 7.3e-71 271.2 176 76.7
COL.COLO4_12484 Corchorus olitorius HOM05D006638 ORTHO05D008246 7.3e-71 271.2 187 69.5
Ca_19858_v3 Cicer arietinum L. HOM05D006638 ORTHO05D008246 1.2e-70 270.4 212 65.1
ECA234G0121 Erigeron canadensis HOM05D006638 ORTHO05D008246 1.2e-70 270.4 182 72.0
Lj3g0022109 Lotus japonicus HOM05D006638 ORTHO05D008246 1.2e-70 270.4 191 68.1
QL04p037061 Quercus lobata HOM05D006638 ORTHO05D008246 1.2e-70 270.4 217 62.7
TAR636G0703 Trochodendron aralioides HOM05D006638 ORTHO05D008246 1.2e-70 270.4 191 69.6
Glyma.03G033200 Glycine max HOM05D006638 ORTHO05D008246 1.6e-70 270.0 191 69.6
Psat0s3685g0120 Pisum sativum HOM05D006638 ORTHO05D008246 1.6e-70 270.0 189 70.9
DCAR_029874 Daucus carota HOM05D006638 ORTHO05D008246 2.8e-70 269.2 191 69.6
Lsat_1_v5_gn_4_45501 Lactuca sativa HOM05D006638 ORTHO05D008246 8.1e-70 267.7 192 70.3
CiPaw.14G025400 Carya illinoinensis HOM05D006638 ORTHO05D008246 1.1e-69 267.3 191 68.6
arahy.Tifrunner.gnm1.ann1.B645Y9 Arachis hypogaea HOM05D006638 ORTHO05D008246 1.4e-69 266.9 223 63.2
Aqoxy7G00747 Aquilegia oxysepala HOM05D006638 ORTHO05D008246 1.8e-69 266.5 192 67.2
Thecc.01G384300 Theobroma cacao HOM05D006638 ORTHO05D008246 1.8e-69 266.5 183 71.0
GSVIVG01018156001 Vitis vinifera HOM05D006638 ORTHO05D008246 1.8e-69 266.5 193 68.9
Cpa.g.sc49.148 Carica papaya HOM05D006638 ORTHO05D008246 3.1e-69 265.8 212 64.2
EL10Ac1g00836 Beta vulgaris HOM05D006638 ORTHO05D008246 4.0e-69 265.4 180 72.2
TWI23G0519 Tripterygium wilfordii HOM05D006638 ORTHO05D008246 4.0e-69 265.4 199 68.3
Eucgr.H00160 Eucalyptus grandis HOM05D006638 ORTHO05D008246 5.2e-69 265.0 179 73.2
MSTRG.4914 Avicennia marina HOM05D006638 ORTHO05D008246 6.8e-69 264.6 213 64.8
Sabra01G0171300 Salix brachista HOM05D006638 ORTHO05D008246 8.9e-69 264.2 184 71.2
Sc23g0003780 Simmondsia chinensis HOM05D006638 ORTHO05D008246 8.9e-69 264.2 204 68.1
CANSAT56G0739 Cannabis sativa HOM05D006638 ORTHO05D008246 1.2e-68 263.8 193 67.9
SGA_v2.0_scaffold43G16517 Striga asiatica HOM05D006638 ORTHO05D008246 3.4e-68 262.3 203 65.5
Potri.004G225600 Populus trichocarpa HOM05D006638 ORTHO05D008246 4.4e-68 261.9 184 70.7
Cc02_g24450 Coffea canephora HOM05D006638 ORTHO05D008246 9.9e-68 260.8 197 69.0
MD07G1114500 Malus domestica HOM05D006638 ORTHO05D008246 9.9e-68 260.8 191 67.5
SalBow1G6174 Salvia bowleyana HOM05D006638 ORTHO05D008246 3.8e-67 258.8 183 69.9
ClCG05G000210 Citrullus lanatus HOM05D006638 ORTHO05D008246 4.9e-67 258.5 196 65.8
Duzib133G1291 Durio zibethinus HOM05D006638 ORTHO05D008246 6.4e-67 258.1 213 61.5
CsaV3_3G007360 Cucumis sativus L. HOM05D006638 ORTHO05D008246 8.4e-67 257.7 198 65.2
Medtr4g027430 Medicago truncatula HOM05D006638 ORTHO05D008246 8.4e-67 257.7 188 67.6
BraA09t41748Z Brassica rapa HOM05D006638 ORTHO05D008246 1.1e-66 257.3 185 67.0
C08p47510 Brassica napus HOM05D006638 ORTHO05D008246 1.9e-66 256.5 185 67.0
Gorai.008G106400 Gossypium raimondii HOM05D006638 ORTHO05D008246 3.2e-66 255.8 189 66.7
BcaC07g42567 Brassica carinata HOM05D006638 ORTHO05D008246 4.2e-66 255.4 185 66.5
Carub.0001s1192 Capsella rubella HOM05D006638 ORTHO05D008246 4.2e-66 255.4 187 64.7
Aa31LG1G2420 Aethionema arabicum HOM05D006638 ORTHO05D008246 5.4e-66 255.0 183 66.1
BcaC07g41715 Brassica carinata HOM05D006638 ORTHO05D008246 5.4e-66 255.0 185 65.9
Gohir.A12G095100 Gossypium hirsutum HOM05D006638 ORTHO05D008246 7.1e-66 254.6 187 67.4
Hund17047 Selenicereus undatus HOM05D006638 ORTHO05D008246 1.6e-65 253.4 180 70.0
CDE02G4315 Ceratophyllum demersum HOM05D000218 ORTHO05D000125 2.1e-65 253.1 182 67.6
Ciclev10023836m.g Citrus clementina HOM05D006638 ORTHO05D008246 4.6e-65 251.9 203 64.5
THA.LOC104809455 Tarenaya hassleriana HOM05D006638 ORTHO05D008246 6.0e-65 251.5 213 60.6
AL1G23530 Arabidopsis lyrata HOM05D006638 ORTHO05D008246 7.8e-65 251.1 188 63.3
BolC8t52292H Brassica oleracea HOM05D006638 ORTHO05D008246 7.8e-65 251.1 185 65.9
Lj1g0022300 Lotus japonicus HOM05D006638 ORTHO05D008246 7.8e-65 251.1 188 66.0
CARHR012550 Cardamine hirsuta HOM05D006638 ORTHO05D008246 1.3e-64 250.4 206 61.2
unitig_748.g7114 Utricularia gibba HOM05D006638 ORTHO05D008246 1.7e-64 250.0 183 64.5
AT1G12244 Arabidopsis thaliana HOM05D006638 ORTHO05D008246 3.9e-64 248.8 186 62.9
Thhalv10008640m.g Eutrema salsugineum HOM05D006638 ORTHO05D008246 3.9e-64 248.8 185 65.4
PGR142G0596 Punica granatum HOM05D006638 ORTHO05D008246 4.3e-63 245.4 253 53.8
HPP92_022319 Vanilla planifolia HOM05D006638 ORTHO05D008246 1.4e-61 240.4 174 68.4
HPP92_022327 Vanilla planifolia HOM05D006638 ORTHO05D008246 1.5e-60 236.9 174 67.2
VMungo0331G0589 Vigna mungo HOM05D006638 ORTHO05D008246 1.3e-59 233.8 191 62.8
Actinidia33482 Actinidia chinensis HOM05D006638 ORTHO05D008246 7.9e-57 224.6 191 66.5
TAR629G0886 Trochodendron aralioides HOM05D006638 ORTHO05D008246 1.5e-55 220.3 189 60.8
Os10g0555200 Oryza sativa ssp. japonica HOM05D006638 ORTHO05D008246 2.5e-55 219.5 220 56.8
MELO3C005958.2 Cucumis melo HOM05D006638 ORTHO05D008246 1.3e-54 217.2 304 43.1
Sp1g10860 Schrenkiella parvula HOM05D006638 ORTHO05D008246 1.1e-53 214.2 196 57.7
Phvul.010G071600 Phaseolus vulgaris HOM05D006638 ORTHO05D008246 1.5e-52 210.3 131 76.3
CSS0019813 Camellia sinensis var. sinensis HOM05D006638 ORTHO05D008246 1.1e-50 204.1 202 57.9
CSS0044007 Camellia sinensis var. sinensis HOM05D006638 ORTHO05D008246 9.3e-50 201.1 200 57.5
Manes.17G011000 Manihot esculenta HOM05D006638 ORTHO05D008246 2.7e-49 199.5 126 77.0
Ah.01g003990 Amaranthus hybridus HOM05D006638 ORTHO05D008246 3.9e-48 195.7 138 71.0
TPR.G27556 Trifolium pratense HOM05D006638 ORTHO05D008246 1.9e-47 193.4 128 71.9
Sed0019776 Sechium edule HOM05D006638 ORTHO05D008246 3.3e-47 192.6 129 71.3
Zm00001eb023510 Zea mays HOM05D006638 ORTHO05D008246 6.2e-46 188.3 145 67.6
Gohir.D12G097700 Gossypium hirsutum HOM05D006638 ORTHO05D008246 2.4e-45 186.4 127 70.9
MBI04_g09497_MAGBIO Magnolia biondii HOM05D006638 ORTHO05D008246 4.0e-45 185.7 185 55.1
ATR0317G113 Amborella trichopoda HOM05D006638 ORTHO05D008246 6.9e-45 184.9 142 60.6
vmacro21035 Vaccinium macrocarpon HOM05D006638 ORTHO05D008246 1.2e-41 174.1 116 75.0
Hma1.2p1_0001F.1_g001250 Hydrangea macrophylla HOM05D006638 ORTHO05D008246 1.6e-41 173.7 116 74.1
Oeu000021.1 Olea europaea HOM05D006638 ORTHO05D008246 1.8e-40 170.2 120 75.0
CSS0006996 Camellia sinensis var. sinensis HOM05D006638 ORTHO05D008246 8.7e-40 167.9 108 78.7
AagrBONN_evm.TU.Sc2ySwM_228.3890 Anthoceros agrestis HOM05D006638 ORTHO05D008246 1.1e-39 167.5 175 52.0
Mapoly0010s0011 Marchantia polymorpha HOM05D006638 ORTHO05D008246 1.1e-37 161.0 176 50.6
CSS0041268 Camellia sinensis var. sinensis HOM05D006638 ORTHO05D008246 2.0e-36 156.8 108 75.9
Pp3c1_23680 Physcomitrium patens HOM05D006638 ORTHO05D008246 9.3e-34 147.9 170 47.1
Rhsim01G0151400 Rhododendron simsii HOM05D006638 ORTHO05D008246 9.3e-34 147.9 106 67.0
Medtr2g064690 Medicago truncatula HOM05D006638 ORTHO05D008246 7.9e-33 144.8 129 58.9
FAN01G0965 Fragaria x ananassa HOM05D006638 ORTHO05D008246 3.3e-31 139.4 97 71.1
SMO340G0150 Selaginella moellendorffii HOM05D006638 ORTHO05D008246 3.8e-27 125.9 176 43.8
TPR.G4994 Trifolium pratense HOM05D006954 ORTHO05D008246 2.0e-23 113.6 91 59.3
Pp3c1_23620 Physcomitrium patens HOM05D006638 ORTHO05D008246 3.7e-22 109.4 133 45.9
CBR_g17705 Chara braunii HOM05D006638 ORTHO05D008246 5.1e-16 89.0 160 36.2
Lsat_1_v5_gn_6_51920 Lactuca sativa HOM05D006638 ORTHO05D008246 5.1e-16 89.0 71 62.0
Medtr2g064700 Medicago truncatula HOM05D006638 ORTHO05D008246 2.0e-15 87.0 49 77.6
vmacro21034 Vaccinium macrocarpon HOM05D006638 ORTHO05D008246 9.7e-15 84.7 64 62.5
Solyc12g035620.2 Solanum lycopersicum HOM05D006638 ORTHO05D008246 8.5e-11 71.6 48 70.8
Medtr2g064670 Medicago truncatula HOM05D006638 ORTHO05D008246 1.5e-10 70.9 41 73.2
Lsat_1_v5_gn_1_125220 Lactuca sativa HOM05D006638 ORTHO05D008246 9.4e-10 68.2 54 63.0
MELO3C033920.2 Cucumis melo HOM05D006638 ORTHO05D008246 2.3e-08 63.5 101 38.6
RcHm_v2.0_Chr1g0349061 Rosa chinensis HOM05D006638 ORTHO05D008246 6.3e-06 55.5 44 59.1


User provided reference genes

Program Settings