Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen01g036610 Solanum pennellii HOM05D005957 ORTHO05D007318 7.4e-95 350.5 175 100.0
Solyc01g090870.1 Solanum lycopersicum HOM05D005957 ORTHO05D007318 1.8e-93 345.9 175 98.9
PGSC0003DMG400046061 Solanum tuberosum HOM05D005957 ORTHO05D007318 4.8e-86 321.2 175 92.0
Nitab4.5_0007927g0010 Nicotiana tabacum HOM05D005957 ORTHO05D007318 1.4e-69 266.5 187 74.9
Peaxi162Scf01692g00003 Petunia axillaris HOM05D005957 ORTHO05D007318 2.2e-67 259.2 191 72.3
Nitab4.5_0000002g0080 Nicotiana tabacum HOM05D005957 ORTHO05D007318 6.5e-67 257.7 187 73.3
Peaxi162Scf00390g00049 Petunia axillaris HOM05D005957 ORTHO05D007318 1.9e-58 229.6 183 65.0
CAN.G1872.4 Capsicum annuum HOM05D005957 ORTHO05D007318 1.6e-57 226.5 145 79.3
Nitab4.5_0002091g0020 Nicotiana tabacum HOM05D005957 ORTHO05D007318 6.8e-56 221.1 193 63.2
Solyc06g082450.1 Solanum lycopersicum HOM05D005957 ORTHO05D007318 1.6e-52 209.9 183 62.3
Hma1.2p1_0119F.1_g056870 Hydrangea macrophylla HOM05D005957 ORTHO05D007318 1.7e-51 206.5 186 61.3
Nitab4.5_0002759g0020 Nicotiana tabacum HOM05D005957 ORTHO05D007318 2.7e-49 199.1 195 59.5
Oeu064677.1 Olea europaea HOM05D005957 ORTHO05D007318 1.0e-48 197.2 174 58.0
Cc01_g15210 Coffea canephora HOM05D005957 ORTHO05D007318 4.0e-48 195.3 184 57.6
Duzib168G0649 Durio zibethinus HOM05D005957 ORTHO05D007318 2.3e-43 179.5 184 51.6
GSVIVG01024580001 Vitis vinifera HOM05D005957 ORTHO05D007318 3.8e-43 178.7 183 52.5
Haze_24453 Corylus avellana HOM05D005957 ORTHO05D007318 6.6e-43 177.9 188 55.3
Potri.013G155300 Populus trichocarpa HOM05D005957 ORTHO05D007318 1.1e-42 177.2 184 53.3
Atru.chr1.2524 Acer truncatum HOM05D005957 ORTHO05D007318 3.3e-42 175.6 191 51.8
Cfa011817 Carpinus fangiana HOM05D005957 ORTHO05D007318 5.6e-42 174.9 189 54.5
Sopen06g033830 Solanum pennellii HOM05D005957 ORTHO05D007318 1.6e-41 173.3 116 69.8
QL01p025125 Quercus lobata HOM05D005957 ORTHO05D007318 2.1e-41 172.9 187 51.9
Potri.019G128400 Populus trichocarpa HOM05D005957 ORTHO05D007318 4.7e-41 171.8 186 50.0
Sabra19G0126000 Salix brachista HOM05D005957 ORTHO05D007318 6.1e-41 171.4 189 49.2
CiPaw.14G051700 Carya illinoinensis HOM05D005957 ORTHO05D007318 1.2e-39 167.2 175 52.6
LjContig00141g0008224 Lotus japonicus HOM05D005957 ORTHO05D007318 2.0e-39 166.4 166 54.2
Manes.18G139500 Manihot esculenta HOM05D005957 ORTHO05D007318 2.6e-39 166.0 189 51.3
Glyma.14G203500 Glycine max HOM05D005957 ORTHO05D007318 3.4e-39 165.6 185 51.4
CSS0038993 Camellia sinensis var. sinensis HOM05D005957 ORTHO05D007318 4.4e-39 165.2 115 73.0
COL.COLO4_11196 Corchorus olitorius HOM05D005957 ORTHO05D007318 5.7e-39 164.9 188 51.6
Migut.N00743 Erythranthe guttata HOM05D005957 ORTHO05D007318 1.7e-38 163.3 205 46.3
CiPaw.13G065100 Carya illinoinensis HOM05D005957 ORTHO05D007318 1.1e-37 160.6 181 49.2
Migut.D00827 Erythranthe guttata HOM05D005957 ORTHO05D007318 7.0e-37 157.9 186 46.8
CANSAT54G0691 Cannabis sativa HOM05D005957 ORTHO05D007318 1.2e-36 157.1 180 51.7
Dinv04837 Davidia involucrata HOM05D005957 ORTHO05D007318 1.2e-36 157.1 110 70.0
VMungo0647G0754 Vigna mungo HOM05D005957 ORTHO05D007318 1.2e-36 157.1 184 48.9
FAN21G1009 Fragaria x ananassa HOM05D005957 ORTHO05D007318 1.6e-36 156.8 180 50.0
Gohir.A05G129400 Gossypium hirsutum HOM05D005957 ORTHO05D007318 1.6e-36 156.8 188 50.0
Glyma.02G235500 Glycine max HOM05D005957 ORTHO05D007318 3.5e-36 155.6 185 51.4
Gorai.009G137600 Gossypium raimondii HOM05D005957 ORTHO05D007318 3.5e-36 155.6 189 50.8
SGA_v2.0_scaffold77G25368 Striga asiatica HOM05D005957 ORTHO05D007318 3.5e-36 155.6 173 52.6
Lsat_1_v5_gn_0_40840 Lactuca sativa HOM05D005957 ORTHO05D007318 1.0e-35 154.1 109 68.8
FvH4_3g40300 Fragaria vesca HOM05D005957 ORTHO05D007318 1.3e-35 153.7 179 48.6
HanXRQChr01g0028631 Helianthus annuus HOM05D005957 ORTHO05D007318 1.3e-35 153.7 178 50.0
Phvul.008G248400 Phaseolus vulgaris HOM05D005957 ORTHO05D007318 6.6e-35 151.4 179 50.8
RcHm_v2.0_Chr5g0072641 Rosa chinensis HOM05D005957 ORTHO05D007318 8.6e-35 151.0 167 50.9
Prupe.6G042800 Prunus persica HOM05D005957 ORTHO05D007318 1.1e-34 150.6 187 44.9
MBI03_g02190_MAGBIO Magnolia biondii HOM05D005957 ORTHO05D007318 2.5e-34 149.4 166 50.0
Psat2g052120 Pisum sativum HOM05D005957 ORTHO05D007318 2.5e-34 149.4 179 49.7
HanXRQChr17g0565391 Helianthus annuus HOM05D005957 ORTHO05D007318 3.3e-34 149.1 169 54.4
ECA236G1285 Erigeron canadensis HOM05D005957 ORTHO05D007318 5.6e-34 148.3 113 63.7
MD11G1055300 Malus domestica HOM05D005957 ORTHO05D007318 5.6e-34 148.3 182 46.2
Thecc.09G362300 Theobroma cacao HOM05D005957 ORTHO05D007318 7.3e-34 147.9 114 64.0
Sabra13G0125100 Salix brachista HOM05D005957 ORTHO05D007318 1.2e-33 147.1 109 65.1
Aqoxy2G00718 Aquilegia oxysepala HOM05D005957 ORTHO05D007318 3.6e-33 145.6 176 48.9
Ciclev10003853m.g Citrus clementina HOM05D005957 ORTHO05D007318 6.2e-33 144.8 199 45.7
TWI79G1455 Tripterygium wilfordii HOM05D005957 ORTHO05D007318 1.0e-32 144.1 115 60.9
TPR.G25771 Trifolium pratense HOM05D005957 ORTHO05D007318 2.3e-32 142.9 176 48.3
CsaV3_6G019090 Cucumis sativus L. HOM05D005957 ORTHO05D007318 4.0e-32 142.1 177 50.3
MSTRG.17909 Avicennia marina HOM05D005957 ORTHO05D007318 5.2e-32 141.7 116 60.3
MD03G1053700 Malus domestica HOM05D005957 ORTHO05D007318 8.9e-32 141.0 189 43.9
Medtr5g075190 Medicago truncatula HOM05D005957 ORTHO05D007318 8.9e-32 141.0 176 47.2
Cpa.g.sc2.317 Carica papaya HOM05D005957 ORTHO05D007318 1.5e-31 140.2 108 63.0
MELO3C026874.2 Cucumis melo HOM05D005957 ORTHO05D007318 1.5e-31 140.2 180 49.4
FAN25G1085 Fragaria x ananassa HOM05D005957 ORTHO05D007318 4.4e-31 138.7 157 51.0
TAR623G0423 Trochodendron aralioides HOM05D005957 ORTHO05D007318 4.4e-31 138.7 108 63.9
FAN16G3236 Fragaria x ananassa HOM05D005957 ORTHO05D007318 5.8e-31 138.3 157 51.0
FAN11G2330 Fragaria x ananassa HOM05D005957 ORTHO05D007318 7.5e-31 137.9 157 51.0
Sed0019639 Sechium edule HOM05D005957 ORTHO05D007318 1.7e-30 136.7 180 48.3
Ah.08g217120 Amaranthus hybridus HOM05D005957 ORTHO05D007318 2.9e-30 136.0 150 52.0
THA.LOC104800785 Tarenaya hassleriana HOM05D005957 ORTHO05D007318 4.9e-30 135.2 185 43.8
Dinv28722 Davidia involucrata HOM05D005957 ORTHO05D007318 6.4e-30 134.8 90 73.3
Gohir.D05G134050 Gossypium hirsutum HOM05D005957 ORTHO05D007318 8.3e-30 134.4 121 59.5
EL10Ac7g16454 Beta vulgaris HOM05D005957 ORTHO05D007318 1.1e-29 134.0 96 64.6
Carub.0004s1155 Capsella rubella HOM05D005957 ORTHO05D007318 1.1e-29 134.0 188 45.2
Oeu011373.1 Olea europaea HOM05D005957 ORTHO05D007318 1.1e-29 134.0 110 60.9
SalBow6G3501 Salvia bowleyana HOM05D005957 ORTHO05D007318 1.1e-29 134.0 107 62.6
Lalb_Chr17g0345591 Lupinus albus HOM05D005957 ORTHO05D007318 1.9e-29 133.3 180 46.7
AT2G30395 Arabidopsis thaliana HOM05D005957 ORTHO05D007318 3.2e-29 132.5 184 44.6
AL4G25260 Arabidopsis lyrata HOM05D005957 ORTHO05D007318 4.1e-29 132.1 184 44.0
Rhsim13G0060900 Rhododendron simsii HOM05D005957 ORTHO05D007318 7.0e-29 131.3 106 62.3
vmacro02888 Vaccinium macrocarpon HOM05D005957 ORTHO05D007318 1.2e-28 130.6 114 57.0
Aa31LG5G6330 Aethionema arabicum HOM05D005957 ORTHO05D007318 3.5e-28 129.0 195 42.6
CARHR123750 Cardamine hirsuta HOM05D005957 ORTHO05D007318 3.5e-28 129.0 197 43.1
Ca_05700_v3 Cicer arietinum L. HOM05D005957 ORTHO05D007318 6.0e-28 128.3 113 60.2
Ca_30026_v3 Cicer arietinum L. HOM05D005957 ORTHO05D007318 6.0e-28 128.3 113 60.2
Nn5g26879 Nelumbo nucifera HOM05D005957 ORTHO05D007318 7.8e-28 127.9 116 57.8
PSO017G7297 Papaver somniferum HOM05D005957 ORTHO05D007318 7.8e-28 127.9 110 60.0
PSO170G5428 Papaver somniferum HOM05D005957 ORTHO05D007318 1.0e-27 127.5 110 60.0
BcaC02g11133 Brassica carinata HOM05D005957 ORTHO05D007318 1.7e-27 126.7 195 45.1
BolC4t23551H Brassica oleracea HOM05D005957 ORTHO05D007318 3.9e-27 125.6 195 44.6
ClCG02G019100 Citrullus lanatus HOM05D005957 ORTHO05D007318 3.9e-27 125.6 178 43.3
Sp4g12950 Schrenkiella parvula HOM05D005957 ORTHO05D007318 3.9e-27 125.6 189 42.9
Thhalv10017867m.g Eutrema salsugineum HOM05D005957 ORTHO05D007318 5.0e-27 125.2 193 43.5
C04p20120 Brassica napus HOM05D005957 ORTHO05D007318 6.6e-27 124.8 196 44.4
A04p23170 Brassica napus HOM05D005957 ORTHO05D007318 1.5e-26 123.6 186 43.5
BcaB02g10322 Brassica carinata HOM05D005957 ORTHO05D007318 3.3e-26 122.5 193 43.0
A05p15090 Brassica napus HOM05D005957 ORTHO05D007318 3.3e-26 122.5 193 43.5
BraA05t20430Z Brassica rapa HOM05D005957 ORTHO05D007318 3.3e-26 122.5 192 44.3
BcaB06g28364 Brassica carinata HOM05D005957 ORTHO05D007318 4.3e-26 122.1 186 43.0
BraA04t17844Z Brassica rapa HOM05D005957 ORTHO05D007318 4.3e-26 122.1 193 42.5
Dinv12270 Davidia involucrata HOM05D005957 ORTHO05D007318 2.1e-25 119.8 88 68.2
BcaC02g08022 Brassica carinata HOM05D005957 ORTHO05D007318 3.6e-25 119.0 186 42.5
C04p59320 Brassica napus HOM05D005957 ORTHO05D007318 3.6e-25 119.0 186 42.5
Thhalv10017852m.g Eutrema salsugineum HOM05D005957 ORTHO05D007318 4.7e-25 118.6 193 43.0
ATR0681G143 Amborella trichopoda HOM05D005957 ORTHO05D007318 4.0e-24 115.5 165 41.2
Eucgr.J01842 Eucalyptus grandis HOM05D005957 ORTHO05D007318 8.9e-24 114.4 100 58.0
PGR119G2032 Punica granatum HOM05D005957 ORTHO05D007318 1.2e-23 114.0 65 78.5
BolC4t27440H Brassica oleracea HOM05D005957 ORTHO05D007318 1.5e-23 113.6 193 40.4
Phvul.006G076900 Phaseolus vulgaris HOM05D005957 ORTHO05D007318 1.5e-23 113.6 110 50.9
Sc21g0004870 Simmondsia chinensis HOM05D005957 ORTHO05D007318 9.8e-23 110.9 101 53.5
Ah.15g095100 Amaranthus hybridus HOM05D005957 ORTHO05D007318 1.7e-22 110.2 214 35.5
DCAR_023195 Daucus carota HOM05D005957 ORTHO05D007318 1.6e-20 103.6 204 36.3
AUR62007156 Chenopodium quinoa HOM05D003140 ORTHO05D003851 6.0e-20 101.7 108 48.1
Thhalv10009633m.g Eutrema salsugineum HOM05D005957 ORTHO05D007318 6.0e-20 101.7 90 51.1
Carub.0001s0622 Capsella rubella HOM05D005957 ORTHO05D007318 7.8e-20 101.3 97 49.5
AT1G06923 Arabidopsis thaliana HOM05D005957 ORTHO05D007318 1.7e-19 100.1 164 37.8
Zm00001eb350230 Zea mays HOM05D005957 ORTHO05D007318 1.7e-19 100.1 98 54.1
Os07g0679100 Oryza sativa ssp. japonica HOM05D005957 ORTHO05D007318 3.0e-19 99.4 107 49.5
CARHR006600 Cardamine hirsuta HOM05D005957 ORTHO05D007318 5.1e-19 98.6 95 46.3
Os05g0328300 Oryza sativa ssp. japonica HOM05D005957 ORTHO05D007318 1.1e-18 97.4 67 65.7
Sp1g05630 Schrenkiella parvula HOM05D005957 ORTHO05D007318 9.5e-18 94.4 71 56.3
AL1G16950 Arabidopsis lyrata HOM05D005957 ORTHO05D007318 2.1e-17 93.2 159 37.7
BcaC07g42550 Brassica carinata HOM05D005957 ORTHO05D007318 3.6e-17 92.4 64 59.4
Zm00001eb330630 Zea mays HOM05D005957 ORTHO05D007318 1.8e-16 90.1 69 58.0
A09p66670 Brassica napus HOM05D005957 ORTHO05D007318 4.0e-16 89.0 61 62.3
BraA09t42007Z Brassica rapa HOM05D005957 ORTHO05D007318 4.0e-16 89.0 61 62.3
BcaC07g42036 Brassica carinata HOM05D005957 ORTHO05D007318 2.6e-15 86.3 61 60.7
BcaC07g42037 Brassica carinata HOM05D005957 ORTHO05D007318 2.6e-15 86.3 61 60.7
C08p50900 Brassica napus HOM05D005957 ORTHO05D007318 2.6e-15 86.3 61 60.7
BolC8t52618H Brassica oleracea HOM05D005957 ORTHO05D007318 2.6e-15 86.3 61 60.7
SEGI_34718 Sequoiadendron giganteum HOM05D005957 ORTHO05D007318 3.1e-08 62.8 62 43.5
CARHR123780 Cardamine hirsuta HOM05D005957 ORTHO05D007318 8.4e-06 54.7 157 33.1


User provided reference genes

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