Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen01g036190 Solanum pennellii HOM05D002637 ORTHO05D009046 5.4e-96 354.4 185 100.0
Nitab4.5_0003696g0080 Nicotiana tabacum HOM05D002637 ORTHO05D009046 4.2e-48 195.3 175 61.7
MSTRG.17133 Avicennia marina HOM05D002637 ORTHO05D009046 2.0e-37 159.8 168 50.0
Migut.B01543 Erythranthe guttata HOM05D002637 ORTHO05D009046 1.1e-35 154.1 168 46.4
vmacro21056 Vaccinium macrocarpon HOM05D002637 ORTHO05D009046 1.1e-35 154.1 171 48.5
SGA_v2.0_scaffold153G36910 Striga asiatica HOM05D002637 ORTHO05D008095 1.8e-35 153.3 168 46.4
Actinidia33504 Actinidia chinensis HOM05D002637 ORTHO05D009046 3.1e-35 152.5 168 48.2
HanXRQChr16g0520331 Helianthus annuus HOM05D002637 ORTHO05D009046 4.1e-35 152.1 168 47.0
THA.LOC104807614 Tarenaya hassleriana HOM05D002637 ORTHO05D009046 4.1e-35 152.1 169 46.7
Lsat_1_v5_gn_4_46620 Lactuca sativa HOM05D002637 ORTHO05D009046 5.3e-35 151.8 168 45.8
Dinv43628 Davidia involucrata HOM05D002637 ORTHO05D009046 1.2e-34 150.6 170 49.4
Thhalv10026444m.g Eutrema salsugineum HOM05D002637 ORTHO05D009046 2.6e-34 149.4 164 46.3
ECA234G1562 Erigeron canadensis HOM05D002637 ORTHO05D009046 4.5e-34 148.7 168 45.8
Carub.0007s0284 Capsella rubella HOM05D002637 ORTHO05D009046 5.9e-34 148.3 164 45.1
Oeu063229.1 Olea europaea HOM05D002637 ORTHO05D009046 1.0e-33 147.5 158 47.5
CARHR245840 Cardamine hirsuta HOM05D002637 ORTHO05D009046 1.3e-33 147.1 164 44.5
TAR629G0766 Trochodendron aralioides HOM05D002637 ORTHO05D009046 1.7e-33 146.7 182 45.1
AT4G37445 Arabidopsis thaliana HOM05D002637 ORTHO05D009046 2.2e-33 146.4 164 43.9
Prupe.2G128200 Prunus persica HOM05D002637 ORTHO05D009046 2.9e-33 146.0 158 46.2
BcaNung03660 Brassica carinata HOM05D002637 ORTHO05D009046 3.8e-33 145.6 162 45.1
QL04p030668 Quercus lobata HOM05D002637 ORTHO05D009046 8.5e-33 144.4 163 41.1
BcaNung05079 Brassica carinata HOM05D002637 ORTHO05D009046 1.1e-32 144.1 164 43.9
Aqoxy3G02748 Aquilegia oxysepala HOM05D002637 ORTHO05D009046 1.4e-32 143.7 165 42.4
AL7G13350 Arabidopsis lyrata HOM05D002637 ORTHO05D009046 1.4e-32 143.7 155 44.5
Sp7g35140 Schrenkiella parvula HOM05D002637 ORTHO05D009046 1.4e-32 143.7 164 43.3
EL10Ac1g00772 Beta vulgaris HOM05D002637 ORTHO05D009046 3.2e-32 142.5 167 44.3
DCAR_029750 Daucus carota HOM05D002637 ORTHO05D000193 3.2e-32 142.5 157 45.9
arahy.Tifrunner.gnm1.ann1.TJ44DN Arachis hypogaea HOM05D002637 ORTHO05D009046 9.4e-32 141.0 165 41.8
arahy.Tifrunner.gnm1.ann1.P225XX Arachis hypogaea HOM05D002637 ORTHO05D009046 1.2e-31 140.6 165 41.8
Cfa011083 Carpinus fangiana HOM05D002637 ORTHO05D009046 1.2e-31 140.6 168 43.5
Ciclev10026646m.g Citrus clementina HOM05D002637 ORTHO05D009046 1.2e-31 140.6 162 45.1
Cc02_g25010 Coffea canephora HOM05D002637 ORTHO05D009046 1.6e-31 140.2 157 45.2
PGR042G3993 Punica granatum HOM05D002637 ORTHO05D009046 1.6e-31 140.2 169 43.2
FAN03G2438 Fragaria x ananassa HOM05D002637 ORTHO05D009046 3.6e-31 139.0 158 44.9
PSO063G5174 Papaver somniferum HOM05D002637 ORTHO05D009046 7.9e-31 137.9 177 42.4
C01p01670 Brassica napus HOM05D002637 ORTHO05D009046 1.0e-30 137.5 176 42.0
BolC1t00161H Brassica oleracea HOM05D002637 ORTHO05D009046 1.0e-30 137.5 176 42.0
Lj3g0027924 Lotus japonicus HOM05D002637 ORTHO05D009046 1.0e-30 137.5 173 43.9
BraA01t00144Z Brassica rapa HOM05D002637 ORTHO05D009046 1.4e-30 137.1 174 42.0
A01p01510 Brassica napus HOM05D002637 ORTHO05D009046 2.3e-30 136.3 174 41.4
Nn1g00869 Nelumbo nucifera HOM05D002637 ORTHO05D009046 2.3e-30 136.3 171 43.3
unitig_8.g3841 Utricularia gibba HOM05D002637 ORTHO05D008095 2.3e-30 136.3 153 43.8
Haze_02819 Corylus avellana HOM05D002637 ORTHO05D009046 8.8e-30 134.4 134 46.3
TWI53G0102 Tripterygium wilfordii HOM05D002637 ORTHO05D009046 8.8e-30 134.4 168 41.1
CANSAT21G1080 Cannabis sativa HOM05D002637 ORTHO05D009046 1.1e-29 134.0 162 43.2
Eucgr.E01572 Eucalyptus grandis HOM05D002637 ORTHO05D009046 1.1e-29 134.0 129 48.8
FAN06G1198 Fragaria x ananassa HOM05D000001 ORTHO05D009896 1.1e-29 134.0 158 42.4
MD07G1104600 Malus domestica HOM05D002637 ORTHO05D009046 1.1e-29 134.0 161 43.5
Phvul.010G051600 Phaseolus vulgaris HOM05D002637 ORTHO05D009046 1.5e-29 133.7 170 41.2
TAR629G0936 Trochodendron aralioides HOM05D002637 ORTHO05D009046 1.5e-29 133.7 192 42.2
FvH4_7g09940 Fragaria vesca HOM05D002637 ORTHO05D009046 4.4e-29 132.1 153 43.1
FAN06G2425 Fragaria x ananassa HOM05D000001 ORTHO05D009896 5.7e-29 131.7 158 41.1
Manes.12G109800 Manihot esculenta HOM05D002637 ORTHO05D009046 9.7e-29 131.0 158 43.0
Medtr8g006765 Medicago truncatula HOM05D002637 ORTHO05D009046 9.7e-29 131.0 168 38.7
Medtr4g094628 Medicago truncatula HOM05D002637 ORTHO05D009046 1.3e-28 130.6 171 40.4
Atru.chr3.227 Acer truncatum HOM05D002637 ORTHO05D009046 2.2e-28 129.8 174 37.9
Peaxi162Scf00030g00043 Petunia axillaris HOM05D002637 ORTHO05D009046 2.2e-28 129.8 109 61.5
AUR62023418 Chenopodium quinoa HOM05D000001 ORTHO05D009896 2.8e-28 129.4 176 40.9
MD07G1105300 Malus domestica HOM05D002637 ORTHO05D009046 3.7e-28 129.0 161 41.6
CiPaw.14G021200 Carya illinoinensis HOM05D002637 ORTHO05D009046 4.8e-28 128.6 165 40.6
FAN01G0925 Fragaria x ananassa HOM05D002637 ORTHO05D009046 6.3e-28 128.3 158 40.5
TPR.G33150 Trifolium pratense HOM05D002637 ORTHO05D009046 8.2e-28 127.9 168 40.5
Potri.007G051200 Populus trichocarpa HOM05D002637 ORTHO05D009046 1.1e-27 127.5 164 42.1
VMungo0331G2001 Vigna mungo HOM05D002637 ORTHO05D009046 1.4e-27 127.1 175 40.6
Lj1g0023703 Lotus japonicus HOM05D002637 ORTHO05D009046 1.8e-27 126.7 158 42.4
Thecc.01G067000 Theobroma cacao HOM05D002637 ORTHO05D009046 1.8e-27 126.7 169 40.8
TPR.G12142 Trifolium pratense HOM05D002637 ORTHO05D009046 1.8e-27 126.7 165 42.4
Lalb_Chr13g0290561 Lupinus albus HOM05D002637 ORTHO05D009046 3.1e-27 125.9 135 43.0
Sabra07G0045200 Salix brachista HOM05D002328 ORTHO05D002433 5.3e-27 125.2 172 40.7
Duzib147G1684 Durio zibethinus HOM05D002637 ORTHO05D009046 7.0e-27 124.8 159 41.5
Glyma.03G113700 Glycine max HOM05D002637 ORTHO05D009046 7.0e-27 124.8 168 36.9
Gorai.011G107300 Gossypium raimondii HOM05D002637 ORTHO05D009046 1.6e-26 123.6 152 42.1
Psat4g225240 Pisum sativum HOM05D002637 ORTHO05D009046 1.6e-26 123.6 168 39.3
Manes.13G115300 Manihot esculenta HOM05D002637 ORTHO05D009046 4.5e-26 122.1 170 40.6
COL.COLO4_11517 Corchorus olitorius HOM05D002637 ORTHO05D009046 5.9e-26 121.7 160 40.6
Ca_14060_v3 Cicer arietinum L. HOM05D002637 ORTHO05D009046 1.0e-25 120.9 168 37.5
Sc02g0003060 Simmondsia chinensis HOM05D002637 ORTHO05D009046 2.2e-25 119.8 145 42.1
Hund17084 Selenicereus undatus HOM05D002637 ORTHO05D009046 3.8e-25 119.0 156 43.6
BcaNung02947 Brassica carinata HOM05D002637 ORTHO05D009046 5.0e-25 118.6 151 38.4
Nitab4.5_0003553g0040 Nicotiana tabacum HOM05D002637 ORTHO05D009046 1.5e-24 117.1 183 42.6
Duzib187G0274 Durio zibethinus HOM05D002637 ORTHO05D009046 2.5e-24 116.3 160 42.5
Cpa.g.sc6.62 Carica papaya HOM05D003561 ORTHO05D004351 5.5e-24 115.2 162 42.6
Lj7A545G96 Lonicera japonica HOM05D002637 ORTHO05D009046 1.6e-23 113.6 130 46.2
Rhsim01G0139600 Rhododendron simsii HOM05D002637 ORTHO05D009046 1.6e-23 113.6 122 52.5
RcHm_v2.0_Chr1g0347501 Rosa chinensis HOM05D002637 ORTHO05D009046 2.1e-23 113.2 165 36.4
AUR62013735 Chenopodium quinoa HOM05D002637 ORTHO05D009046 3.6e-23 112.5 135 42.2
Ca_04041_v3 Cicer arietinum L. HOM05D002637 ORTHO05D008095 1.0e-22 110.9 131 43.5
A01p01520 Brassica napus HOM05D002637 ORTHO05D009046 1.4e-22 110.5 146 39.7
BraA01t00145Z Brassica rapa HOM05D002637 ORTHO05D009046 1.4e-22 110.5 146 39.7
Psat3g194760 Pisum sativum HOM05D002637 ORTHO05D009046 3.0e-22 109.4 150 37.3
TAR629G3341 Trochodendron aralioides HOM05D002637 ORTHO05D009046 4.0e-22 109.0 128 43.8
Manes.13G115400 Manihot esculenta HOM05D002637 ORTHO05D009046 9.7e-21 104.4 170 36.5
GSVIVG01018261001 Vitis vinifera HOM05D002637 ORTHO05D009046 1.7e-20 103.6 169 36.7
Glyma.07G113000 Glycine max HOM05D002637 ORTHO05D009046 2.2e-20 103.2 126 39.7
Ca_24158_v3 Cicer arietinum L. HOM05D002637 ORTHO05D009046 2.8e-20 102.8 109 45.0
Aa31LG6G14300 Aethionema arabicum HOM05D002637 ORTHO05D009046 6.3e-20 101.7 164 39.0
Ca_14062_v3 Cicer arietinum L. HOM05D000534 ORTHO05D009046 1.8e-19 100.1 131 40.5
Phvul.008G046000 Phaseolus vulgaris HOM05D002637 ORTHO05D009046 3.1e-19 99.4 101 47.5
CSS0047370 Camellia sinensis var. sinensis HOM05D002637 ORTHO05D009046 7.7e-18 94.7 99 49.5
FAN10G0921 Fragaria x ananassa HOM05D002637 ORTHO05D009046 3.8e-17 92.4 149 36.9
BcaNung03659 Brassica carinata HOM05D002637 ORTHO05D009046 1.5e-16 90.5 99 46.5
BraA01t00146Z Brassica rapa HOM05D002637 ORTHO05D016052 2.5e-16 89.7 93 47.3
A01p01540 Brassica napus HOM05D002637 ORTHO05D009046 3.2e-16 89.4 94 45.7
CDE06G1866 Ceratophyllum demersum HOM05D004124 ORTHO05D004779 3.2e-16 89.4 150 30.7
SalBow5G5579 Salvia bowleyana HOM05D002637 ORTHO05D009046 4.2e-16 89.0 161 35.4
VMungo1383G0183 Vigna mungo HOM05D002637 ORTHO05D009046 1.2e-15 87.4 98 45.9
HPP92_005363 Vanilla planifolia HOM05D002637 ORTHO05D009046 1.0e-14 84.3 165 33.9
RcHm_v2.0_Chr1g0347531 Rosa chinensis HOM05D002637 ORTHO05D009046 2.3e-14 83.2 80 46.2
GSVIVG01018259001 Vitis vinifera HOM05D002637 ORTHO05D009046 5.2e-14 82.0 110 40.9
TPR.G39072 Trifolium pratense HOM05D002637 ORTHO05D009046 8.8e-14 81.3 139 34.5
FAN10G1525 Fragaria x ananassa HOM05D002637 ORTHO05D009046 1.5e-13 80.5 181 30.4
Os02g0126600 Oryza sativa ssp. japonica HOM05D002637 ORTHO05D009046 1.3e-12 77.4 134 31.3
Glyma.18G252700 Glycine max HOM05D002637 ORTHO05D009046 6.3e-12 75.1 78 46.2
Atru.chr3.216 Acer truncatum HOM05D002637 ORTHO05D009046 3.1e-11 72.8 70 44.3
ATR0057G030 Amborella trichopoda HOM05D002637 ORTHO05D009046 9.1e-11 71.2 151 28.5
BolC7t46653H Brassica oleracea HOM05D002637 ORTHO05D009046 1.0e-09 67.8 142 30.3
Prupe.2G128500 Prunus persica HOM05D000001 ORTHO05D009896 2.9e-09 66.2 81 44.4
Zm00001eb230930 Zea mays HOM05D002637 ORTHO05D009046 2.1e-07 60.1 133 31.6
Eucgr.E01765 Eucalyptus grandis HOM05D005192 ORTHO05D006023 1.8e-06 57.0 142 27.5
Nitab4.5_0004594g0120 Nicotiana tabacum HOM05D005192 ORTHO05D006023 2.3e-06 56.6 147 27.9
Nitab4.5_0004800g0050 Nicotiana tabacum HOM05D005192 ORTHO05D006023 2.3e-06 56.6 147 27.9
Peaxi162Scf00245g00322 Petunia axillaris HOM05D005192 ORTHO05D006023 5.2e-06 55.5 141 29.1
Prupe.2G101300 Prunus persica HOM05D005192 ORTHO05D006023 6.8e-06 55.1 155 29.0


User provided reference genes

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