Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen01g035730 Solanum pennellii HOM05D007972 ORTHO05D010352 1.7e-68 263.1 191 100.0
Solyc01g089890.3 Solanum lycopersicum HOM05D007972 ORTHO05D010352 5.1e-65 251.5 191 79.6
PGSC0003DMG401031172 Solanum tuberosum HOM05D007972 ORTHO05D010352 9.9e-61 237.3 191 81.7
CAN.G1585.6 Capsicum annuum HOM05D007972 ORTHO05D010352 5.1e-57 224.9 191 72.3
Nitab4.5_0000563g0210 Nicotiana tabacum HOM05D007972 ORTHO05D010352 7.1e-51 204.5 191 63.4
Nitab4.5_0004837g0020 Nicotiana tabacum HOM05D007972 ORTHO05D010352 5.1e-49 198.4 191 63.4
Peaxi162Scf00853g00034 Petunia axillaris HOM05D007972 ORTHO05D010352 2.6e-45 186.0 191 63.4
PGSC0003DMG400031171 Solanum tuberosum HOM05D007972 ORTHO05D010352 1.9e-43 179.9 191 56.5
CAN.G1585.7 Capsicum annuum HOM05D007972 ORTHO05D010352 6.1e-42 174.9 191 55.5
Sopen01g035720 Solanum pennellii HOM05D007972 ORTHO05D010352 1.5e-40 170.2 143 67.8
Solyc01g089880.3 Solanum lycopersicum HOM05D007972 ORTHO05D010352 1.3e-39 167.2 143 65.7
TWI14G1321 Tripterygium wilfordii HOM05D007972 ORTHO05D010352 1.4e-25 120.6 124 54.8
Potri.017G027900 Populus trichocarpa HOM05D007972 ORTHO05D010352 1.8e-25 120.2 145 49.7
QL04p029068 Quercus lobata HOM05D007972 ORTHO05D010352 1.5e-24 117.1 190 41.6
TWI59G1165 Tripterygium wilfordii HOM05D007972 ORTHO05D010352 1.5e-24 117.1 184 41.8
CANSAT25G1078 Cannabis sativa HOM05D007972 ORTHO05D010352 2.8e-23 112.8 189 42.9
CiPaw.13G024900 Carya illinoinensis HOM05D007972 ORTHO05D010352 3.7e-23 112.5 141 48.9
VMungo1383G2083 Vigna mungo HOM05D007972 ORTHO05D010352 3.7e-23 112.5 141 48.2
Ca_08498_v3 Cicer arietinum L. HOM05D007972 ORTHO05D010352 6.3e-23 111.7 134 50.0
Ca_29723_v3 Cicer arietinum L. HOM05D007972 ORTHO05D010352 6.3e-23 111.7 134 50.0
Manes.04G044100 Manihot esculenta HOM05D007972 ORTHO05D010352 6.3e-23 111.7 130 46.2
Psat3g070000 Pisum sativum HOM05D007972 ORTHO05D010352 1.1e-22 110.9 134 47.0
TAR636G0859 Trochodendron aralioides HOM05D007972 ORTHO05D010352 1.8e-22 110.2 190 40.0
Cfa011053 Carpinus fangiana HOM05D007972 ORTHO05D010352 2.4e-22 109.8 189 41.8
Lalb_Chr01g0021721 Lupinus albus HOM05D007972 ORTHO05D010352 4.1e-22 109.0 124 53.2
Prupe.2G122000 Prunus persica HOM05D007972 ORTHO05D010352 1.2e-21 107.5 188 41.0
Glyma.18G249100 Glycine max HOM05D007972 ORTHO05D010352 1.6e-21 107.1 124 49.2
Glyma.09G244400 Glycine max HOM05D007972 ORTHO05D010352 3.5e-21 105.9 124 48.4
Sabra17G0017000 Salix brachista HOM05D007972 ORTHO05D010352 4.5e-21 105.5 148 46.6
Lj1g0012968 Lotus japonicus HOM05D007972 ORTHO05D010352 1.0e-20 104.4 124 49.2
Manes.11G122500 Manihot esculenta HOM05D007972 ORTHO05D010352 1.0e-20 104.4 145 41.4
Sabra17G0016900 Salix brachista HOM05D007972 ORTHO05D010352 1.0e-20 104.4 147 44.2
RcHm_v2.0_Chr1g0346011 Rosa chinensis HOM05D007972 ORTHO05D010352 1.3e-20 104.0 190 38.4
Medtr7g092700 Medicago truncatula HOM05D007972 ORTHO05D010352 3.8e-20 102.4 120 48.3
Oeu037442.1 Olea europaea HOM05D007972 ORTHO05D010352 8.5e-20 101.3 177 40.1
Migut.B01509 Erythranthe guttata HOM05D007972 ORTHO05D010352 2.5e-19 99.8 119 52.1
Nn1g00786 Nelumbo nucifera HOM05D007972 ORTHO05D010352 2.5e-19 99.8 141 40.4
TPR.G4718 Trifolium pratense HOM05D007972 ORTHO05D010352 2.5e-19 99.8 121 48.8
TPR.G28769 Trifolium pratense HOM05D007972 ORTHO05D010352 3.2e-19 99.4 121 49.6
MD02G1218900 Malus domestica HOM05D007972 ORTHO05D010352 7.2e-19 98.2 191 37.7
MD07G1098000 Malus domestica HOM05D007972 ORTHO05D010352 1.8e-17 93.6 130 43.1
VMungo1383G2794 Vigna mungo HOM05D007972 ORTHO05D010352 3.0e-17 92.8 122 45.1
Glyma.09G244600 Glycine max HOM05D007972 ORTHO05D010352 1.5e-16 90.5 141 42.6
Medtr7g081655 Medicago truncatula HOM05D007972 ORTHO05D010352 3.3e-16 89.4 145 41.4
MBI04_g13845_MAGBIO Magnolia biondii HOM05D007972 ORTHO05D010352 4.4e-16 89.0 141 41.1
Psat3g099040 Pisum sativum HOM05D007972 ORTHO05D010352 4.4e-16 89.0 122 44.3
RcHm_v2.0_Chr1g0346041 Rosa chinensis HOM05D007972 ORTHO05D010352 4.4e-16 89.0 190 35.8
Lj5g0008867 Lotus japonicus HOM05D007972 ORTHO05D010352 9.7e-16 87.8 122 41.8
Medtr7g092710 Medicago truncatula HOM05D007972 ORTHO05D010352 1.3e-15 87.4 134 40.3
TPR.G14096 Trifolium pratense HOM05D007972 ORTHO05D010352 4.8e-15 85.5 121 44.6
Eucgr.E01544 Eucalyptus grandis HOM05D007972 ORTHO05D010352 1.1e-14 84.3 137 40.1
Eucgr.E01542 Eucalyptus grandis HOM05D007972 ORTHO05D010352 1.8e-14 83.6 148 39.9
AUR62032352 Chenopodium quinoa HOM05D007972 ORTHO05D010352 5.9e-13 78.6 127 41.7
Eucgr.E01539 Eucalyptus grandis HOM05D007972 ORTHO05D010352 2.2e-12 76.6 120 43.3
AUR62041847 Chenopodium quinoa HOM05D007972 ORTHO05D010352 1.5e-11 73.9 127 38.6
Phvul.008G048700 Phaseolus vulgaris HOM05D007972 ORTHO05D010352 7.2e-11 71.6 138 33.3
Glyma.18G248700 Glycine max HOM05D007972 ORTHO05D010352 1.8e-09 67.0 141 34.0
QL04p029065 Quercus lobata HOM05D007972 ORTHO05D010352 2.3e-09 66.6 132 37.1
Phvul.008G048532 Phaseolus vulgaris HOM05D007972 ORTHO05D010352 1.4e-06 57.4 59 52.5


User provided reference genes

Program Settings