Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen01g034790 Solanum pennellii HOM05D007776 ORTHO05D009812 1.4e-63 246.1 122 100.0
Solyc01g087860.2 Solanum lycopersicum HOM05D007776 ORTHO05D009812 1.6e-59 232.6 125 93.6
PGSC0003DMG400006837 Solanum tuberosum HOM05D007776 ORTHO05D009812 5.2e-55 217.6 126 90.5
Dinv41753 Davidia involucrata HOM05D000238 ORTHO05D002999 4.2e-20 101.7 109 52.3
Migut.C01313 Erythranthe guttata HOM05D007776 ORTHO05D009812 3.0e-18 95.5 130 50.0
MD15G1406800 Malus domestica HOM05D007776 ORTHO05D009812 1.9e-17 92.8 113 49.6
Gohir.D05G288000 Gossypium hirsutum HOM05D007776 ORTHO05D009812 9.6e-17 90.5 114 46.5
Gorai.009G303100 Gossypium raimondii HOM05D007776 ORTHO05D009812 9.6e-17 90.5 114 46.5
CiPaw.05G123100 Carya illinoinensis HOM05D007776 ORTHO05D009812 4.8e-16 88.2 121 48.8
Nn5g27525 Nelumbo nucifera HOM05D007776 ORTHO05D009812 2.4e-15 85.9 134 44.0
Prupe.1G555000 Prunus persica HOM05D007776 ORTHO05D009812 2.4e-15 85.9 107 51.4
CiPaw.07G236300 Carya illinoinensis HOM05D007776 ORTHO05D009812 3.1e-15 85.5 120 46.7
Gohir.A05G287000 Gossypium hirsutum HOM05D007776 ORTHO05D009812 3.1e-15 85.5 114 45.6
CSS0049282 Camellia sinensis var. sinensis HOM05D007776 ORTHO05D009812 6.9e-15 84.3 114 50.9
Potri.013G107300 Populus trichocarpa HOM05D007776 ORTHO05D009812 9.0e-15 84.0 119 50.4
Manes.02G198100 Manihot esculenta HOM05D007776 ORTHO05D009812 1.5e-14 83.2 113 47.8
CANSAT25G0596 Cannabis sativa HOM05D007776 ORTHO05D009812 4.5e-14 81.6 118 45.8
Potri.019G079800 Populus trichocarpa HOM05D007776 ORTHO05D009812 4.5e-14 81.6 124 47.6
RcHm_v2.0_Chr7g0227891 Rosa chinensis HOM05D007776 ORTHO05D009812 5.8e-14 81.3 110 49.1
FAN04G0521 Fragaria x ananassa HOM05D007776 ORTHO05D009812 1.3e-13 80.1 109 47.7
TWI59G0674 Tripterygium wilfordii HOM05D007776 ORTHO05D009812 1.3e-13 80.1 104 50.0
C06p11140 Brassica napus HOM05D007776 ORTHO05D009812 2.2e-13 79.3 121 42.1
BolC6t36249H Brassica oleracea HOM05D007776 ORTHO05D009812 2.2e-13 79.3 121 42.1
Haze_21304 Corylus avellana HOM05D007776 ORTHO05D009812 2.9e-13 79.0 105 49.5
Sabra19G0091100 Salix brachista HOM05D007776 ORTHO05D009812 2.9e-13 79.0 119 44.5
FAN04G1877 Fragaria x ananassa HOM05D007776 ORTHO05D009812 3.8e-13 78.6 109 47.7
Aa31LG6G8730 Aethionema arabicum HOM05D007776 ORTHO05D009812 4.9e-13 78.2 128 43.8
BcaC08g43737 Brassica carinata HOM05D007776 ORTHO05D009812 4.9e-13 78.2 121 41.3
FAN08G2421 Fragaria x ananassa HOM05D007776 ORTHO05D009812 4.9e-13 78.2 128 43.8
Lsat_1_v5_gn_3_48301 Lactuca sativa HOM05D007776 ORTHO05D009812 6.4e-13 77.8 123 43.9
THA.LOC104806792 Tarenaya hassleriana HOM05D007776 ORTHO05D009812 6.4e-13 77.8 129 43.4
TWI14G0313 Tripterygium wilfordii HOM05D007776 ORTHO05D009812 6.4e-13 77.8 101 47.5
BraA09t38716Z Brassica rapa HOM05D007776 ORTHO05D009812 8.4e-13 77.4 118 45.8
Ciclev10002690m.g Citrus clementina HOM05D007776 ORTHO05D009812 1.4e-12 76.6 119 44.5
FAN18G1270 Fragaria x ananassa HOM05D007776 ORTHO05D009812 1.9e-12 76.3 128 43.0
FvH4_5g31870 Fragaria vesca HOM05D007776 ORTHO05D009812 2.4e-12 75.9 129 42.6
Sed0008767 Sechium edule HOM05D007776 ORTHO05D009812 2.4e-12 75.9 105 49.5
VMungo1080G1686 Vigna mungo HOM05D007776 ORTHO05D009812 2.4e-12 75.9 106 50.9
A09p31800 Brassica napus HOM05D007776 ORTHO05D009812 4.2e-12 75.1 116 44.0
Cc10_g10000 Coffea canephora HOM05D007776 ORTHO05D009812 4.2e-12 75.1 110 44.5
Psat5g210040 Pisum sativum HOM05D007776 ORTHO05D009812 4.2e-12 75.1 115 47.8
CARHR034200 Cardamine hirsuta HOM05D007776 ORTHO05D009812 5.4e-12 74.7 106 49.1
Lalb_Chr25g0282901 Lupinus albus HOM05D007776 ORTHO05D009812 7.1e-12 74.3 118 44.9
Sabra13G0092600 Salix brachista HOM05D007776 ORTHO05D009812 9.3e-12 73.9 116 50.0
Cfa012949 Carpinus fangiana HOM05D007776 ORTHO05D009812 1.2e-11 73.6 105 45.7
PGR042G2621 Punica granatum HOM05D007776 ORTHO05D009812 2.1e-11 72.8 119 47.1
Sp1g30150 Schrenkiella parvula HOM05D007776 ORTHO05D009812 2.1e-11 72.8 110 46.4
Duzib177G0943 Durio zibethinus HOM05D007776 ORTHO05D009812 2.7e-11 72.4 107 43.9
Duzib116G0238 Durio zibethinus HOM05D007776 ORTHO05D009812 7.9e-11 70.9 108 45.4
HanXRQChr05g0130261 Helianthus annuus HOM05D007776 ORTHO05D009812 1.8e-10 69.7 103 39.8
Ca_14480_v3 Cicer arietinum L. HOM05D007776 ORTHO05D009812 2.3e-10 69.3 117 45.3
AT1G35430 Arabidopsis thaliana HOM05D007776 ORTHO05D009812 3.0e-10 68.9 109 46.8
Rhsim12G0006900 Rhododendron simsii HOM05D007776 ORTHO05D009812 5.1e-10 68.2 101 41.6
QL02p026198 Quercus lobata HOM05D007776 ORTHO05D009812 6.7e-10 67.8 106 43.4
TAR628G0395 Trochodendron aralioides HOM05D007776 ORTHO05D009812 6.7e-10 67.8 117 40.2
AL1G50270 Arabidopsis lyrata HOM05D007776 ORTHO05D009812 1.1e-09 67.0 108 47.2
ECA233G5618 Erigeron canadensis HOM05D007776 ORTHO05D009812 1.1e-09 67.0 49 61.2
TPR.G27845 Trifolium pratense HOM05D000479 ORTHO05D009812 1.1e-09 67.0 112 42.0
Thecc.08G190700 Theobroma cacao HOM05D007776 ORTHO05D009812 1.5e-09 66.6 118 39.8
Carub.0001s3303 Capsella rubella HOM05D007776 ORTHO05D009812 1.9e-09 66.2 112 44.6
Ah.05g178510 Amaranthus hybridus HOM05D007776 ORTHO05D009812 3.3e-09 65.5 121 38.8
Cpa.g.sc507.3 Carica papaya HOM05D007776 ORTHO05D009812 3.3e-09 65.5 117 41.0
BcaB01g02801 Brassica carinata HOM05D007776 ORTHO05D009812 9.6e-09 63.9 105 40.0
Thhalv10029064m.g Eutrema salsugineum HOM05D007776 ORTHO05D009812 2.8e-08 62.4 122 39.3
Phvul.005G023800 Phaseolus vulgaris HOM05D007776 ORTHO05D009812 3.7e-08 62.0 102 46.1
ClCG11G008540 Citrullus lanatus HOM05D007776 ORTHO05D009812 8.1e-08 60.8 112 42.0
Peaxi162Scf00076g00214 Petunia axillaris HOM05D007776 ORTHO05D009812 1.1e-07 60.5 75 53.3
Medtr0045s0130 Medicago truncatula HOM05D007776 ORTHO05D009812 1.4e-07 60.1 122 41.8
CARHR260240 Cardamine hirsuta HOM05D007776 ORTHO05D009812 2.4e-07 59.3 107 42.1
Lsat_1_v5_gn_8_157180 Lactuca sativa HOM05D007776 ORTHO05D009812 2.4e-07 59.3 53 56.6
A03p28480 Brassica napus HOM05D007776 ORTHO05D009812 3.1e-07 58.9 102 39.2
BraA03t12053Z Brassica rapa HOM05D007776 ORTHO05D009812 3.1e-07 58.9 102 39.2
COL.COLO4_25869 Corchorus olitorius HOM05D007776 ORTHO05D009812 3.1e-07 58.9 46 60.9
Lj3g0020626 Lotus japonicus HOM05D007776 ORTHO05D009812 5.3e-07 58.2 107 43.0
SalBow7G1484 Salvia bowleyana HOM05D007776 ORTHO05D009812 6.9e-07 57.8 107 39.3
BcaC01g04727 Brassica carinata HOM05D007776 ORTHO05D009812 9.0e-07 57.4 102 38.2
Thhalv10001838m.g Eutrema salsugineum HOM05D007776 ORTHO05D009812 2.6e-06 55.8 122 42.6
unitig_46.g17995 Utricularia gibba HOM05D007776 ORTHO05D009812 2.6e-06 55.8 105 38.1
AL6G42920 Arabidopsis lyrata HOM05D007776 ORTHO05D009812 3.4e-06 55.5 106 42.5
C03p34420 Brassica napus HOM05D007776 ORTHO05D009812 1.0e-05 53.9 102 37.3
BolC3t15751H Brassica oleracea HOM05D007776 ORTHO05D009812 1.0e-05 53.9 102 37.3
Glyma.10G090400 Glycine max HOM05D007776 ORTHO05D009812 1.0e-05 53.9 89 43.8


User provided reference genes

Program Settings