Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen01g033500 Solanum pennellii HOM05D006965 ORTHO05D008652 3.4e-211 738.0 359 100.0
Solyc01g073930.3 Solanum lycopersicum HOM05D006965 ORTHO05D008652 4.3e-206 721.1 359 97.8
PGSC0003DMG400006312 Solanum tuberosum HOM05D006965 ORTHO05D008652 1.6e-197 692.6 359 94.4
CAN.G261.10 Capsicum annuum HOM05D006965 ORTHO05D008652 1.9e-182 642.5 360 87.5
Nitab4.5_0004592g0020 Nicotiana tabacum HOM05D006965 ORTHO05D008652 2.2e-170 602.4 361 82.3
Nitab4.5_0000892g0120 Nicotiana tabacum HOM05D006965 ORTHO05D008652 1.5e-166 589.7 349 82.8
Cc02_g27080 Coffea canephora HOM05D006965 ORTHO05D008652 9.4e-129 464.2 344 64.5
vmacro13617 Vaccinium macrocarpon HOM05D006965 ORTHO05D008652 6.1e-128 461.5 352 63.6
Ciclev10031978m.g Citrus clementina HOM05D006965 ORTHO05D008652 1.0e-127 460.7 350 63.7
Actinidia32338 Actinidia chinensis HOM05D006965 ORTHO05D008652 4.4e-126 455.3 348 64.4
CSS0026631 Camellia sinensis var. sinensis HOM05D006965 ORTHO05D008652 1.4e-124 450.3 346 63.9
Cfa004805 Carpinus fangiana HOM05D006965 ORTHO05D008652 3.1e-124 449.1 344 62.5
Manes.10G151000 Manihot esculenta HOM05D006965 ORTHO05D008652 4.1e-124 448.7 355 61.4
Atru.chr11.2694 Acer truncatum HOM05D006965 ORTHO05D008652 9.1e-124 447.6 349 63.9
RcHm_v2.0_Chr1g0313421 Rosa chinensis HOM05D006965 ORTHO05D008652 9.1e-124 447.6 345 63.5
Thecc.01G416200 Theobroma cacao HOM05D006965 ORTHO05D008652 1.2e-123 447.2 365 58.4
MD07G1002700 Malus domestica HOM05D006965 ORTHO05D008652 1.6e-123 446.8 369 59.9
Potri.009G023200 Populus trichocarpa HOM05D006965 ORTHO05D008652 1.0e-122 444.1 346 62.7
QL04p003153 Quercus lobata HOM05D006965 ORTHO05D008652 2.2e-122 443.0 346 61.6
Lj3g0017203 Lotus japonicus HOM05D006965 ORTHO05D008652 2.9e-122 442.6 349 62.2
QL04p000072 Quercus lobata HOM05D006965 ORTHO05D008652 2.9e-122 442.6 344 61.6
CiPaw.13G000900 Carya illinoinensis HOM05D006965 ORTHO05D008652 5.0e-122 441.8 346 61.8
MD02G1318500 Malus domestica HOM05D006965 ORTHO05D008652 5.0e-122 441.8 348 61.2
Sabra09G0014600 Salix brachista HOM05D006965 ORTHO05D008652 8.5e-122 441.0 346 61.6
MSTRG.17063 Avicennia marina HOM05D006965 ORTHO05D008652 1.5e-121 440.3 350 61.1
Phvul.005G039600 Phaseolus vulgaris HOM05D006965 ORTHO05D008652 1.9e-121 439.9 347 63.1
Haze_10398 Corylus avellana HOM05D006965 ORTHO05D008652 2.5e-121 439.5 352 60.8
FAN01G2144 Fragaria x ananassa HOM05D006965 ORTHO05D008652 2.5e-121 439.5 345 62.0
QL04p003146 Quercus lobata HOM05D006965 ORTHO05D008652 1.6e-120 436.8 346 61.8
TAR633G1267 Trochodendron aralioides HOM05D006965 ORTHO05D008652 2.1e-120 436.4 346 62.4
Nn2g15664 Nelumbo nucifera HOM05D006965 ORTHO05D008652 3.0e-119 432.6 346 62.1
Haze_10419 Corylus avellana HOM05D006965 ORTHO05D008652 6.7e-119 431.4 338 61.8
Haze_10424 Corylus avellana HOM05D006965 ORTHO05D008652 6.7e-119 431.4 338 61.8
GSVIVG01001368001 Vitis vinifera HOM05D006965 ORTHO05D008652 8.8e-119 431.0 331 64.4
Sc12g0002350 Simmondsia chinensis HOM05D006965 ORTHO05D008652 1.2e-118 430.6 345 62.3
Migut.B01364 Erythranthe guttata HOM05D006965 ORTHO05D008652 3.3e-118 429.1 343 60.1
Gohir.D08G037500 Gossypium hirsutum HOM05D006965 ORTHO05D008652 4.4e-118 428.7 350 58.6
Glyma.08G149400 Glycine max HOM05D006965 ORTHO05D008652 5.7e-118 428.3 347 61.7
Gohir.A08G026760 Gossypium hirsutum HOM05D006965 ORTHO05D008652 7.5e-118 427.9 350 58.3
FvH4_7g00170 Fragaria vesca HOM05D006965 ORTHO05D008652 9.7e-118 427.6 363 58.7
TPR.G11733 Trifolium pratense HOM05D006965 ORTHO05D008652 1.7e-117 426.8 347 60.8
Gorai.004G035500 Gossypium raimondii HOM05D006965 ORTHO05D008652 3.7e-117 425.6 350 58.3
Rhsim07G0050600 Rhododendron simsii HOM05D006965 ORTHO05D008652 8.3e-117 424.5 336 59.5
Lalb_Chr25g0283521 Lupinus albus HOM05D006965 ORTHO05D008652 2.4e-116 422.9 346 58.7
Psat1g128200 Pisum sativum HOM05D006965 ORTHO05D008652 3.1e-116 422.5 346 59.5
ClCG10G012640 Citrullus lanatus HOM05D006965 ORTHO05D008652 9.1e-116 421.0 354 57.3
CsaV3_3G032450 Cucumis sativus L. HOM05D006965 ORTHO05D008652 2.7e-115 419.5 346 57.8
SalBow5G3371 Salvia bowleyana HOM05D006965 ORTHO05D008652 2.2e-114 416.4 325 60.9
ECA248G1794 Erigeron canadensis HOM05D006965 ORTHO05D008652 2.9e-114 416.0 346 59.0
THA.LOC104827577 Tarenaya hassleriana HOM05D006965 ORTHO05D008652 1.1e-113 414.1 348 56.6
AL4G43420 Arabidopsis lyrata HOM05D006965 ORTHO05D008652 1.9e-113 413.3 348 56.3
MBI04_g33895_MAGBIO Magnolia biondii HOM05D006965 ORTHO05D008652 1.9e-113 413.3 347 59.4
AUR62012162 Chenopodium quinoa HOM05D006965 ORTHO05D008652 2.5e-113 412.9 343 59.5
TWI73G0408 Tripterygium wilfordii HOM05D006965 ORTHO05D008652 2.5e-113 412.9 346 59.8
PSO339G5860 Papaver somniferum HOM05D006965 ORTHO05D008652 5.5e-113 411.8 346 56.9
CANSAT78G1981 Cannabis sativa HOM05D006965 ORTHO05D008652 9.4e-113 411.0 348 56.3
VMungo1080G1640 Vigna mungo HOM05D006965 ORTHO05D008652 9.4e-113 411.0 331 60.1
Ca_02931_v3 Cicer arietinum L. HOM05D006965 ORTHO05D008652 1.0e-111 407.5 327 59.9
PSO384G4145 Papaver somniferum HOM05D006965 ORTHO05D008652 3.0e-111 406.0 346 56.1
Medtr2g060820 Medicago truncatula HOM05D006965 ORTHO05D008652 4.0e-111 405.6 326 58.6
Sed0016917 Sechium edule HOM05D006965 ORTHO05D008652 5.2e-111 405.2 347 57.6
Aqoxy1G00028 Aquilegia oxysepala HOM05D006965 ORTHO05D008652 8.8e-111 404.4 348 57.2
Peaxi162Scf00878g00321 Petunia axillaris HOM05D006965 ORTHO05D008652 1.2e-110 404.1 263 78.3
FAN06G0111 Fragaria x ananassa HOM05D006965 ORTHO05D008652 3.4e-110 402.5 347 58.5
A05p04570 Brassica napus HOM05D006965 ORTHO05D008652 4.4e-110 402.1 348 55.2
BcaB02g08813 Brassica carinata HOM05D006965 ORTHO05D008652 9.8e-110 401.0 347 55.3
BcaC02g12316 Brassica carinata HOM05D006965 ORTHO05D008652 9.8e-110 401.0 346 54.3
C04p05300 Brassica napus HOM05D006965 ORTHO05D008652 9.8e-110 401.0 346 54.3
SGA_v2.0_scaffold5G03114 Striga asiatica HOM05D006965 ORTHO05D008652 9.8e-110 401.0 343 57.7
FAN10G4273 Fragaria x ananassa HOM05D006965 ORTHO05D008652 2.2e-109 399.8 361 56.8
MELO3C023943.2 Cucumis melo HOM05D006965 ORTHO05D008652 2.8e-109 399.4 345 57.1
BraA05t19431Z Brassica rapa HOM05D006965 ORTHO05D008652 3.7e-109 399.1 348 55.2
Eucgr.G02572 Eucalyptus grandis HOM05D006965 ORTHO05D008652 3.7e-109 399.1 347 56.5
Hund16040 Selenicereus undatus HOM05D006965 ORTHO05D008652 6.3e-109 398.3 328 58.8
Aa31LG1G25970 Aethionema arabicum HOM05D006965 ORTHO05D008652 4.1e-108 395.6 363 52.1
Carub.0004s2700 Capsella rubella HOM05D006965 ORTHO05D008652 1.6e-107 393.7 348 53.4
TAR362G1148 Trochodendron aralioides HOM05D006965 ORTHO05D008652 1.6e-107 393.7 313 63.9
PGR004G0492 Punica granatum HOM05D006965 ORTHO05D008652 2.0e-107 393.3 318 63.5
Thhalv10001527m.g Eutrema salsugineum HOM05D006965 ORTHO05D008652 3.5e-107 392.5 346 53.2
Sp4g26490 Schrenkiella parvula HOM05D006965 ORTHO05D008652 5.9e-107 391.7 346 53.8
AT2G44420 Arabidopsis thaliana HOM05D006965 ORTHO05D008652 2.9e-106 389.4 377 51.2
BolC4t22170H Brassica oleracea HOM05D006965 ORTHO05D008652 8.6e-106 387.9 370 50.8
AUR62022798 Chenopodium quinoa HOM05D006965 ORTHO05D008652 2.1e-104 383.3 343 56.6
Prupe.2G004200 Prunus persica HOM05D006965 ORTHO05D008652 1.4e-103 380.6 278 64.4
Dinv43490 Davidia involucrata HOM05D006965 ORTHO05D008652 5.2e-103 378.6 273 70.0
FAN01G0465 Fragaria x ananassa HOM05D006965 ORTHO05D008652 4.4e-102 375.6 338 55.6
Hma1.2p1_2998F.1_g331493 Hydrangea macrophylla HOM05D006965 ORTHO05D008652 2.8e-101 372.9 255 71.4
HanXRQChr01g0018681 Helianthus annuus HOM05D006965 ORTHO05D008652 4.1e-100 369.0 343 55.1
Hma1.2p1_2998F.1_g331496 Hydrangea macrophylla HOM05D006965 ORTHO05D008652 5.4e-100 368.6 252 71.4
ATR0605G047 Amborella trichopoda HOM05D006965 ORTHO05D008652 1.7e-93 347.1 348 50.6
Zm00001eb275720 Zea mays HOM05D006965 ORTHO05D008652 3.2e-92 342.8 333 51.4
unitig_26.g9594 Utricularia gibba HOM05D001227 ORTHO05D001082 4.6e-91 339.0 349 51.6
Os06g0618150 Oryza sativa ssp. japonica HOM05D006965 ORTHO05D008652 1.5e-89 334.0 337 49.9
Ah.16g102760 Amaranthus hybridus HOM05D006965 ORTHO05D008652 7.3e-89 331.6 343 50.4
EL10Ac2g04673 Beta vulgaris HOM05D006965 ORTHO05D008652 1.2e-88 330.9 312 54.8
Lsat_1_v5_gn_1_110081 Lactuca sativa HOM05D006965 ORTHO05D008652 2.2e-85 320.1 305 54.8
FAN03G0167 Fragaria x ananassa HOM05D006965 ORTHO05D008652 3.7e-85 319.3 253 62.8
COL.COLO4_23913 Corchorus olitorius HOM05D006280 ORTHO05D008652 2.1e-83 313.5 241 62.2
Duzib114G0529 Durio zibethinus HOM05D006965 ORTHO05D008652 1.1e-79 301.2 351 45.3
CDE05G0249 Ceratophyllum demersum HOM05D006965 ORTHO05D008652 6.0e-75 285.4 253 56.5
HPP92_002651 Vanilla planifolia HOM05D006965 ORTHO05D008652 2.2e-69 266.9 239 54.4
DCAR_029603 Daucus carota HOM05D006965 ORTHO05D008652 4.9e-69 265.8 311 47.9
Cfa022003 Carpinus fangiana HOM05D006965 ORTHO05D008652 8.7e-66 255.0 189 64.6
Mapoly0087s0073 Marchantia polymorpha HOM05D006965 ORTHO05D008652 6.2e-64 248.8 354 40.4
CARHR139580 Cardamine hirsuta HOM05D006965 ORTHO05D008652 5.8e-62 242.3 183 57.4
arahy.Tifrunner.gnm1.ann1.Z1UMC7 Arachis hypogaea HOM05D006965 ORTHO05D008652 3.2e-60 236.5 216 57.4
arahy.Tifrunner.gnm1.ann1.ZJD8NP Arachis hypogaea HOM05D006965 ORTHO05D008652 9.6e-57 224.9 244 51.6
Eucgr.L03457 Eucalyptus grandis HOM05D006965 ORTHO05D008652 3.0e-42 176.8 130 57.7
SEGI_12556 Sequoiadendron giganteum HOM05D006965 ORTHO05D008652 1.8e-39 167.5 127 59.8
SMO132G0001 Selaginella moellendorffii HOM05D006965 ORTHO05D008652 4.6e-35 152.9 306 35.3
Haze_10414 Corylus avellana HOM05D006965 ORTHO05D008652 1.5e-33 147.9 100 67.0
Oeu009369.1 Olea europaea HOM05D006965 ORTHO05D008652 6.3e-32 142.5 144 49.3
SMO147G0191 Selaginella moellendorffii HOM05D020017 ORTHO05D022314 6.1e-27 125.9 212 36.3
Cpa.g.sc189.20 Carica papaya HOM05D006965 ORTHO05D008652 4.8e-16 89.7 69 58.0
TPR.G14363 Trifolium pratense HOM05D006965 ORTHO05D008652 7.0e-15 85.9 65 61.5
CBR_g34612 Chara braunii HOM05D006965 ORTHO05D008652 9.1e-15 85.5 106 39.6
Cpa.g.sc189.19 Carica papaya HOM05D006965 ORTHO05D008652 3.5e-14 83.6 84 54.8


User provided reference genes

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