Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen01g032410 Solanum pennellii HOM05D007734 ORTHO05D009807 1.5e-40 169.1 87 100.0
Solyc01g080590.3 Solanum lycopersicum HOM05D007734 ORTHO05D009807 3.4e-40 167.9 87 98.9
PGSC0003DMG400032093 Solanum tuberosum HOM05D007734 ORTHO05D009807 2.4e-38 161.8 87 94.3
CAN.G627.13 Capsicum annuum HOM05D007734 ORTHO05D009807 6.8e-33 143.7 85 87.1
Peaxi162Scf00095g00125 Petunia axillaris HOM05D007734 ORTHO05D009807 2.2e-31 138.7 83 83.1
Nitab4.5_0009396g0030 Nicotiana tabacum HOM05D007734 ORTHO05D009807 4.7e-26 120.9 66 87.9
Duzib151G0459 Durio zibethinus HOM05D007734 ORTHO05D009807 3.1e-25 118.2 85 69.4
Migut.G00233 Erythranthe guttata HOM05D007734 ORTHO05D009807 6.8e-25 117.1 86 67.4
CiPaw.01G155700 Carya illinoinensis HOM05D007734 ORTHO05D009807 8.9e-25 116.7 88 67.0
SGA_v2.0_scaffold142G35667 Striga asiatica HOM05D007734 ORTHO05D009807 4.4e-24 114.4 80 68.8
CiPaw.02G088300 Carya illinoinensis HOM05D007734 ORTHO05D009807 7.5e-24 113.6 88 63.6
Oeu044804.1 Olea europaea HOM05D007734 ORTHO05D009807 7.5e-24 113.6 86 67.4
QL06p006592 Quercus lobata HOM05D007734 ORTHO05D009807 7.5e-24 113.6 79 68.4
Hma1.2p1_0643F.1_g194590 Hydrangea macrophylla HOM05D007734 ORTHO05D009807 1.3e-23 112.8 69 76.8
GSVIVG01017837001 Vitis vinifera HOM05D007734 ORTHO05D009807 4.9e-23 110.9 87 65.5
Thhalv10015120m.g Eutrema salsugineum HOM05D007734 ORTHO05D009807 6.4e-23 110.5 84 63.1
Thecc.04G274000 Theobroma cacao HOM05D007734 ORTHO05D009807 6.4e-23 110.5 81 65.4
MD13G1176100 Malus domestica HOM05D007734 ORTHO05D009807 8.3e-23 110.2 89 60.7
BcaB01g05276 Brassica carinata HOM05D007734 ORTHO05D009807 1.1e-22 109.8 84 60.7
C03p10680 Brassica napus HOM05D007734 ORTHO05D009807 1.1e-22 109.8 84 60.7
BolC3t13544H Brassica oleracea HOM05D007734 ORTHO05D009807 1.1e-22 109.8 84 60.7
TWI73G0877 Tripterygium wilfordii HOM05D007734 ORTHO05D009807 1.1e-22 109.8 80 65.0
MELO3C021378.2 Cucumis melo HOM05D007734 ORTHO05D009807 1.4e-22 109.4 91 63.7
Eucgr.H03661 Eucalyptus grandis HOM05D007734 ORTHO05D009807 1.4e-22 109.4 86 64.0
Gohir.D10G164200 Gossypium hirsutum HOM05D007734 ORTHO05D009807 1.9e-22 109.0 83 66.3
Gorai.006G074800 Gossypium raimondii HOM05D007734 ORTHO05D009807 1.9e-22 109.0 82 65.9
Gorai.011G183300 Gossypium raimondii HOM05D007734 ORTHO05D009807 1.9e-22 109.0 83 66.3
Duzib052G0038 Durio zibethinus HOM05D007734 ORTHO05D009807 2.4e-22 108.6 85 65.9
CsaV3_6G005600 Cucumis sativus L. HOM05D007734 ORTHO05D009807 3.2e-22 108.2 85 63.5
Aa31LG11G10850 Aethionema arabicum HOM05D007734 ORTHO05D009807 4.1e-22 107.8 84 58.3
MD16G1177900 Malus domestica HOM05D007734 ORTHO05D009807 4.1e-22 107.8 89 59.6
Prupe.1G145200 Prunus persica HOM05D007734 ORTHO05D009807 4.1e-22 107.8 89 59.6
TWI09G1295 Tripterygium wilfordii HOM05D007734 ORTHO05D009807 4.1e-22 107.8 85 63.5
Cfa015520 Carpinus fangiana HOM05D007734 ORTHO05D009807 5.4e-22 107.5 87 60.9
Gohir.D09G060100 Gossypium hirsutum HOM05D007734 ORTHO05D009807 5.4e-22 107.5 82 64.6
BraA03t10238Z Brassica rapa HOM05D007734 ORTHO05D009807 7.1e-22 107.1 84 59.5
Sed0021110 Sechium edule HOM05D007734 ORTHO05D009807 7.1e-22 107.1 79 65.8
ClCG06G005560 Citrullus lanatus HOM05D007734 ORTHO05D009807 1.2e-21 106.3 91 61.5
Haze_01029 Corylus avellana HOM05D007734 ORTHO05D009807 1.2e-21 106.3 87 60.9
BcaB01g04888 Brassica carinata HOM05D007734 ORTHO05D009807 1.6e-21 105.9 84 60.7
CARHR194160 Cardamine hirsuta HOM05D007734 ORTHO05D009807 1.6e-21 105.9 86 59.3
Sed0016523 Sechium edule HOM05D007734 ORTHO05D009807 2.7e-21 105.1 85 61.2
Gohir.A09G061200 Gossypium hirsutum HOM05D007734 ORTHO05D009807 3.5e-21 104.8 82 64.6
Glyma.07G252900 Glycine max HOM05D007734 ORTHO05D009807 4.6e-21 104.4 82 63.4
Glyma.17G021500 Glycine max HOM05D007734 ORTHO05D009807 4.6e-21 104.4 84 60.7
Gohir.A10G104500 Gossypium hirsutum HOM05D007734 ORTHO05D009807 6.0e-21 104.0 83 62.7
Phvul.003G099200 Phaseolus vulgaris HOM05D007734 ORTHO05D009807 6.0e-21 104.0 84 61.9
Carub.0006s1717 Capsella rubella HOM05D007734 ORTHO05D009807 7.8e-21 103.6 84 58.3
Sp6g25520 Schrenkiella parvula HOM05D007734 ORTHO05D009807 1.0e-20 103.2 84 58.3
AT5G18850 Arabidopsis thaliana HOM05D007734 ORTHO05D009807 1.7e-20 102.4 84 59.5
AL6G30210 Arabidopsis lyrata HOM05D007734 ORTHO05D009807 3.0e-20 101.7 84 58.3
Lj4g0025137 Lotus japonicus HOM05D007734 ORTHO05D009807 3.0e-20 101.7 80 62.5
CANSAT78G1562 Cannabis sativa HOM05D007734 ORTHO05D009807 3.9e-20 101.3 72 63.9
Dinv44448 Davidia involucrata HOM05D007734 ORTHO05D009807 3.9e-20 101.3 91 62.6
Atru.chr4.2717 Acer truncatum HOM05D007734 ORTHO05D009807 5.1e-20 100.9 66 69.7
FvH4_4g16860 Fragaria vesca HOM05D007734 ORTHO05D009807 5.1e-20 100.9 86 57.0
FAN12G0936 Fragaria x ananassa HOM05D007734 ORTHO05D009807 5.1e-20 100.9 86 57.0
FAN12G2573 Fragaria x ananassa HOM05D007734 ORTHO05D009807 5.1e-20 100.9 86 57.0
arahy.Tifrunner.gnm1.ann1.80YKV9 Arachis hypogaea HOM05D007734 ORTHO05D009807 8.6e-20 100.1 83 60.2
CSS0028590 Camellia sinensis var. sinensis HOM05D007734 ORTHO05D009807 8.6e-20 100.1 88 58.0
Cc03_g02610 Coffea canephora HOM05D007734 ORTHO05D009807 8.6e-20 100.1 79 63.3
Manes.03G189200 Manihot esculenta HOM05D007734 ORTHO05D009807 8.6e-20 100.1 79 59.5
Sabra08G0163100 Salix brachista HOM05D007734 ORTHO05D009807 8.6e-20 100.1 67 71.6
FAN07G1074 Fragaria x ananassa HOM05D007734 ORTHO05D009807 1.5e-19 99.4 83 56.6
RcHm_v2.0_Chr4g0420431 Rosa chinensis HOM05D007734 ORTHO05D009807 1.9e-19 99.0 87 56.3
arahy.Tifrunner.gnm1.ann1.F9B3QK Arachis hypogaea HOM05D007734 ORTHO05D009807 2.5e-19 98.6 83 60.2
FAN17G2648 Fragaria x ananassa HOM05D007734 ORTHO05D009807 4.3e-19 97.8 83 56.6
Nn4g26101 Nelumbo nucifera HOM05D007734 ORTHO05D009807 1.2e-18 96.3 85 55.3
Actinidia40206 Actinidia chinensis HOM05D007734 ORTHO05D009807 6.2e-18 94.0 88 55.7
PSO302G0168 Papaver somniferum HOM05D007734 ORTHO05D009807 8.1e-18 93.6 87 52.9
Potri.008G197300 Populus trichocarpa HOM05D007734 ORTHO05D009807 8.1e-18 93.6 66 68.2
Potri.010G026900 Populus trichocarpa HOM05D007734 ORTHO05D009807 1.1e-17 93.2 67 68.7
TAR365G0453 Trochodendron aralioides HOM05D007734 ORTHO05D009807 1.4e-17 92.8 85 54.1
MSTRG.3964 Avicennia marina HOM05D007734 ORTHO05D009807 4.0e-17 91.3 100 50.0
CDE05G0384 Ceratophyllum demersum HOM05D007734 ORTHO05D009807 8.9e-17 90.1 69 59.4
Ca_30429_v3 Cicer arietinum L. HOM05D007734 ORTHO05D009807 8.9e-17 90.1 65 66.2
Ciclev10007097m.g Citrus clementina HOM05D007734 ORTHO05D009807 8.9e-17 90.1 66 60.6
ATR0487G018 Amborella trichopoda HOM05D007734 ORTHO05D009807 2.6e-16 88.6 72 56.9
MBI19_g13511_MAGBIO Magnolia biondii HOM05D007734 ORTHO05D009807 4.4e-16 87.8 69 55.1
Nitab4.5_0000059g0330 Nicotiana tabacum HOM05D007734 ORTHO05D009807 1.3e-15 86.3 50 84.0
Psat4g030040 Pisum sativum HOM05D007734 ORTHO05D009807 1.3e-15 86.3 59 67.8
CDE05G0036 Ceratophyllum demersum HOM05D007734 ORTHO05D009807 1.1e-14 83.2 50 72.0
Lalb_Chr07g0177521 Lupinus albus HOM05D007734 ORTHO05D009807 1.9e-14 82.4 63 58.7
THA.LOC104818832 Tarenaya hassleriana HOM05D002550 ORTHO05D003420 1.6e-13 79.3 69 55.1
SEGI_32711 Sequoiadendron giganteum HOM05D007734 ORTHO05D009807 3.9e-12 74.7 70 45.7
Aqoxy5G00589 Aquilegia oxysepala HOM05D007734 ORTHO05D009807 1.9e-11 72.4 75 48.0
Sc13g0003750 Simmondsia chinensis HOM05D007734 ORTHO05D009807 7.3e-11 70.5 44 72.7
A03p09150 Brassica napus HOM05D007734 ORTHO05D009807 6.2e-10 67.4 44 65.9
BcaB08g36639 Brassica carinata HOM05D007734 ORTHO05D009807 1.2e-08 63.2 43 67.4
FAN22G2010 Fragaria x ananassa HOM05D007734 ORTHO05D001690 2.0e-08 62.4 41 65.9
Actinidia00065 Actinidia chinensis HOM05D007734 ORTHO05D009807 1.4e-06 56.2 63 46.0
A10p20780 Brassica napus HOM05D007734 ORTHO05D009807 3.2e-06 55.1 36 66.7


User provided reference genes

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