Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen01g032230 Solanum pennellii HOM05D007586 ORTHO05D009554 6.9e-37 156.8 77 100.0
Atru.chr4.2702 Acer truncatum HOM05D007586 ORTHO05D009554 7.4e-23 110.2 71 71.8
vmacro15289 Vaccinium macrocarpon HOM05D007586 ORTHO05D009554 9.6e-23 109.8 77 72.7
COL.COLO4_13963 Corchorus olitorius HOM05D007586 ORTHO05D009554 4.8e-22 107.5 74 71.6
Manes.03G188100 Manihot esculenta HOM05D007586 ORTHO05D009554 1.4e-21 105.9 68 73.5
Hma1.2p1_2025F.1_g311520 Hydrangea macrophylla HOM05D007586 ORTHO05D009554 4.1e-21 104.4 71 67.6
DCAR_027132 Daucus carota HOM05D007586 ORTHO05D009554 6.9e-21 103.6 66 72.7
Dinv38351 Davidia involucrata HOM05D007586 ORTHO05D009554 6.9e-21 103.6 73 67.1
Potri.008G198500 Populus trichocarpa HOM05D007586 ORTHO05D009554 6.9e-21 103.6 73 67.1
Sp6g25470 Schrenkiella parvula HOM05D007586 ORTHO05D009554 1.2e-20 102.8 68 70.6
Sabra08G0162000 Salix brachista HOM05D007586 ORTHO05D009554 1.5e-20 102.4 73 68.5
unitig_749.g14058 Utricularia gibba HOM05D007586 ORTHO05D009554 1.5e-20 102.4 73 68.5
Nn4g26123 Nelumbo nucifera HOM05D007586 ORTHO05D009554 2.0e-20 102.1 66 74.2
Actinidia00073 Actinidia chinensis HOM05D007586 ORTHO05D009554 2.6e-20 101.7 81 64.2
EL10Ac3g07262 Beta vulgaris HOM05D007586 ORTHO05D009554 3.4e-20 101.3 59 78.0
CSS0032912 Camellia sinensis var. sinensis HOM05D007586 ORTHO05D009554 3.4e-20 101.3 86 64.0
Gohir.D10G162600 Gossypium hirsutum HOM05D007586 ORTHO05D009554 3.4e-20 101.3 70 70.0
Gorai.011G181700 Gossypium raimondii HOM05D007586 ORTHO05D009554 3.4e-20 101.3 70 70.0
GSVIVG01017851001 Vitis vinifera HOM05D007586 ORTHO05D009554 4.5e-20 100.9 61 75.4
QL06p006198 Quercus lobata HOM05D007586 ORTHO05D009554 7.6e-20 100.1 72 66.7
Haze_01009 Corylus avellana HOM05D007586 ORTHO05D009554 1.0e-19 99.8 58 77.6
SalBow2G2177 Salvia bowleyana HOM05D007586 ORTHO05D009554 1.3e-19 99.4 57 80.7
Thecc.04G272400 Theobroma cacao HOM05D007586 ORTHO05D009554 1.3e-19 99.4 78 64.1
Gohir.A10G105800 Gossypium hirsutum HOM05D007586 ORTHO05D009554 3.8e-19 97.8 69 69.6
BcaB01g05279 Brassica carinata HOM05D007586 ORTHO05D009554 5.0e-19 97.4 69 68.1
C03p10700 Brassica napus HOM05D007586 ORTHO05D009554 5.0e-19 97.4 69 68.1
Duzib151G0133 Durio zibethinus HOM05D007586 ORTHO05D009554 5.0e-19 97.4 71 67.6
CiPaw.02G089500 Carya illinoinensis HOM05D007586 ORTHO05D009554 6.5e-19 97.1 58 75.9
Cfa015540 Carpinus fangiana HOM05D007586 ORTHO05D009554 1.9e-18 95.5 58 74.1
THA.LOC104802735 Tarenaya hassleriana HOM05D007586 ORTHO05D009554 1.9e-18 95.5 55 80.0
Cpa.g.sc16.72 Carica papaya HOM05D007586 ORTHO05D009554 3.2e-18 94.7 58 74.1
Ah.04g150810 Amaranthus hybridus HOM05D007586 ORTHO05D009554 4.2e-18 94.4 71 64.8
Nitab4.5_0000201g0230 Nicotiana tabacum HOM05D007586 ORTHO05D009554 4.2e-18 94.4 63 71.4
Potri.010G028000 Populus trichocarpa HOM05D007586 ORTHO05D009554 4.2e-18 94.4 62 69.4
PSO832G2949 Papaver somniferum HOM05D007586 ORTHO05D009554 5.5e-18 94.0 61 68.9
Cc03_g02750 Coffea canephora HOM05D007586 ORTHO05D009554 7.2e-18 93.6 61 72.1
Thhalv10015193m.g Eutrema salsugineum HOM05D007586 ORTHO05D009554 7.2e-18 93.6 68 66.2
Lj6g0006659 Lotus japonicus HOM05D007586 ORTHO05D009554 7.2e-18 93.6 71 60.6
Nitab4.5_0009518g0010 Nicotiana tabacum HOM05D007586 ORTHO05D009554 7.2e-18 93.6 63 71.4
PSO210G0926 Papaver somniferum HOM05D007586 ORTHO05D009554 9.3e-18 93.2 61 68.9
A03p09170 Brassica napus HOM05D007586 ORTHO05D009554 1.2e-17 92.8 69 65.2
BraA03t10240Z Brassica rapa HOM05D007586 ORTHO05D009554 1.2e-17 92.8 69 65.2
Migut.G00284 Erythranthe guttata HOM05D007586 ORTHO05D009554 1.2e-17 92.8 79 62.0
BraA10t44138Z Brassica rapa HOM05D007586 ORTHO05D009554 1.6e-17 92.4 70 65.7
Lalb_Chr18g0055891 Lupinus albus HOM05D007586 ORTHO05D009554 1.6e-17 92.4 70 60.0
AUR62018376 Chenopodium quinoa HOM05D000949 ORTHO05D001276 3.6e-17 91.3 62 69.4
CsaV3_6G005530 Cucumis sativus L. HOM05D007586 ORTHO05D009554 3.6e-17 91.3 72 66.7
BcaB01g04886 Brassica carinata HOM05D007586 ORTHO05D009554 4.6e-17 90.9 70 62.9
Psat1g185520 Pisum sativum HOM05D007586 ORTHO05D009554 4.6e-17 90.9 65 60.0
ATR0626G363 Amborella trichopoda HOM05D007586 ORTHO05D009554 1.3e-16 89.4 67 55.2
COL.COLO4_25734 Corchorus olitorius HOM05D007586 ORTHO05D009554 1.3e-16 89.4 54 77.8
Medtr2g020920 Medicago truncatula HOM05D007586 ORTHO05D009554 1.3e-16 89.4 69 58.0
TPR.G18017 Trifolium pratense HOM05D007586 ORTHO05D009554 1.8e-16 89.0 59 62.7
MBI19_g21636_MAGBIO Magnolia biondii HOM05D007586 ORTHO05D009554 3.0e-16 88.2 61 68.9
Sed0005131 Sechium edule HOM05D007586 ORTHO05D009554 3.0e-16 88.2 70 61.4
CARHR194100 Cardamine hirsuta HOM05D007586 ORTHO05D009554 3.9e-16 87.8 58 70.7
ECA246G1660 Erigeron canadensis HOM05D007586 ORTHO05D009554 5.1e-16 87.4 56 69.6
ClCG06G005620 Citrullus lanatus HOM05D007586 ORTHO05D009554 6.7e-16 87.0 72 62.5
Zm00001eb349880 Zea mays HOM05D007586 ORTHO05D009554 1.1e-15 86.3 61 67.2
MD13G1177700 Malus domestica HOM05D007586 ORTHO05D009554 1.5e-15 85.9 70 60.0
Nitab4.5_0000059g0210 Nicotiana tabacum HOM05D007586 ORTHO05D009554 1.5e-15 85.9 68 66.2
Prupe.1G146700 Prunus persica HOM05D007586 ORTHO05D009554 5.7e-15 84.0 62 61.3
Hma1.2p1_0511F.1_g169220 Hydrangea macrophylla HOM05D000488 ORTHO05D000347 7.4e-15 83.6 57 64.9
TWI09G0380 Tripterygium wilfordii HOM05D007586 ORTHO05D009554 7.4e-15 83.6 100 50.0
Glyma.15G100600 Glycine max HOM05D007586 ORTHO05D009554 1.6e-14 82.4 59 59.3
PGR031G0345 Punica granatum HOM05D007586 ORTHO05D009554 1.6e-14 82.4 45 80.0
TAR636G1069 Trochodendron aralioides HOM05D007586 ORTHO05D009554 1.6e-14 82.4 49 77.6
RcHm_v2.0_Chr4g0420101 Rosa chinensis HOM05D007586 ORTHO05D009554 2.2e-14 82.0 52 69.2
arahy.Tifrunner.gnm1.ann1.5VHG73 Arachis hypogaea HOM05D007586 ORTHO05D009554 2.8e-14 81.6 80 51.2
arahy.Tifrunner.gnm1.ann1.SH255N Arachis hypogaea HOM05D007586 ORTHO05D009554 3.7e-14 81.3 80 50.0
Peaxi162Scf00095g00411 Petunia axillaris HOM05D007586 ORTHO05D009554 3.7e-14 81.3 46 87.0
BcaB08g36636 Brassica carinata HOM05D007586 ORTHO05D009554 6.3e-14 80.5 68 57.4
Phvul.006G158200 Phaseolus vulgaris HOM05D007586 ORTHO05D009554 6.3e-14 80.5 59 57.6
Phvul.006G158400 Phaseolus vulgaris HOM05D007586 ORTHO05D009554 6.3e-14 80.5 59 57.6
FvH4_4g16650 Fragaria vesca HOM05D007586 ORTHO05D009554 1.1e-13 79.7 67 55.2
FAN12G0362 Fragaria x ananassa HOM05D007586 ORTHO05D009554 1.1e-13 79.7 67 55.2
CANSAT01G2672 Cannabis sativa HOM05D007586 ORTHO05D009554 1.8e-13 79.0 50 66.0
Aa31LG11G10810 Aethionema arabicum HOM05D007586 ORTHO05D009554 2.4e-13 78.6 55 67.3
Glyma.13G212100 Glycine max HOM05D007586 ORTHO05D009554 3.1e-13 78.2 59 54.2
Lj3g0017006 Lotus japonicus HOM05D007586 ORTHO05D009554 3.1e-13 78.2 54 64.8
AL6G30270 Arabidopsis lyrata HOM05D007586 ORTHO05D009554 4.1e-13 77.8 46 76.1
AT5G18920 Arabidopsis thaliana HOM05D007586 ORTHO05D009554 4.1e-13 77.8 46 76.1
Carub.0006s1722 Capsella rubella HOM05D007586 ORTHO05D009554 4.1e-13 77.8 46 76.1
BolC3t13546H Brassica oleracea HOM05D007586 ORTHO05D009554 5.3e-13 77.4 55 65.5
Ciclev10006319m.g Citrus clementina HOM05D007586 ORTHO05D009554 2.6e-12 75.1 61 62.3
Os05g0404300 Oryza sativa ssp. japonica HOM05D007586 ORTHO05D009554 1.3e-11 72.8 49 65.3
arahy.Tifrunner.gnm1.ann1.70FWSL Arachis hypogaea HOM05D007586 ORTHO05D009554 2.9e-11 71.6 76 47.4
SEGI_37206 Sequoiadendron giganteum HOM05D007586 ORTHO05D009554 2.9e-11 71.6 56 50.0
A10p20750 Brassica napus HOM05D007586 ORTHO05D009554 4.2e-10 67.8 54 63.0
Pp3c2_37920 Physcomitrium patens HOM05D007586 ORTHO05D009554 2.7e-09 65.1 54 50.0
FAN22G2185 Fragaria x ananassa HOM05D007586 ORTHO05D009554 6.1e-09 63.9 51 58.8
Ca_00589_v3 Cicer arietinum L. HOM05D002494 ORTHO05D002673 1.0e-08 63.2 37 67.6
Eucgr.B01188 Eucalyptus grandis HOM05D007586 ORTHO05D009554 5.1e-08 60.8 46 58.7
Medtr2g020940 Medicago truncatula HOM05D007586 ORTHO05D009554 2.0e-07 58.9 50 54.0
Rhsim02G0016900 Rhododendron simsii HOM05D007586 ORTHO05D009554 1.7e-06 55.8 54 57.4
AUR62030290 Chenopodium quinoa HOM05D004624 ORTHO05D005357 2.2e-06 55.5 31 80.6


User provided reference genes

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