Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen01g031530 Solanum pennellii HOM05D006622 ORTHO05D007939 1.7e-160 569.3 287 100.0
Solyc01g079770.2 Solanum lycopersicum HOM05D006622 ORTHO05D007939 5.0e-157 557.8 287 97.9
PGSC0003DMG400044436 Solanum tuberosum HOM05D006622 ORTHO05D007939 8.2e-152 540.4 287 95.1
PGSC0003DMG402008996 Solanum tuberosum HOM05D006622 ORTHO05D007939 8.2e-152 540.4 287 95.1
CAN.G69.14 Capsicum annuum HOM05D006622 ORTHO05D007939 4.0e-130 468.4 287 82.2
Nitab4.5_0000630g0130 Nicotiana tabacum HOM05D006622 ORTHO05D007939 3.1e-106 389.0 277 75.5
Dinv27309 Davidia involucrata HOM05D006622 ORTHO05D007939 4.2e-103 378.6 287 71.8
CSS0023480 Camellia sinensis var. sinensis HOM05D006622 ORTHO05D007939 2.7e-102 375.9 282 70.2
CSS0048522 Camellia sinensis var. sinensis HOM05D006622 ORTHO05D007939 2.7e-102 375.9 282 70.2
Actinidia29467 Actinidia chinensis HOM05D006622 ORTHO05D007939 3.9e-101 372.1 280 70.4
RhsimUnG0092500 Rhododendron simsii HOM05D006622 ORTHO05D007939 5.6e-100 368.2 287 68.6
MSTRG.24172 Avicennia marina HOM05D006622 ORTHO05D007939 2.8e-99 365.9 280 70.4
vmacro00835 Vaccinium macrocarpon HOM05D006622 ORTHO05D007939 2.8e-99 365.9 277 70.0
HanXRQChr09g0260611 Helianthus annuus HOM05D006622 ORTHO05D007939 1.4e-98 363.6 276 71.4
SGA_v2.0_scaffold24G10458 Striga asiatica HOM05D006622 ORTHO05D007939 3.1e-98 362.5 284 68.0
DCAR_003552 Daucus carota HOM05D006622 ORTHO05D007939 1.2e-97 360.5 280 66.4
Cfa016021 Carpinus fangiana HOM05D006622 ORTHO05D007939 9.9e-97 357.5 278 69.4
Oeu040412.1 Olea europaea HOM05D006622 ORTHO05D007939 3.8e-96 355.5 282 65.6
PGR044G1562 Punica granatum HOM05D006622 ORTHO05D007939 3.2e-95 352.4 269 68.0
Ciclev10001495m.g Citrus clementina HOM05D006622 ORTHO05D007939 5.4e-95 351.7 280 67.5
Sabra05G0134700 Salix brachista HOM05D006622 ORTHO05D007939 1.6e-94 350.1 280 66.4
TAR628G0332 Trochodendron aralioides HOM05D006622 ORTHO05D007939 2.1e-94 349.7 287 67.2
Cc10_g11940 Coffea canephora HOM05D006622 ORTHO05D007939 7.8e-94 347.8 267 71.5
Lsat_1_v5_gn_4_135580 Lactuca sativa HOM05D006622 ORTHO05D007939 1.3e-93 347.1 265 70.2
Potri.002G083300 Populus trichocarpa HOM05D006622 ORTHO05D007939 1.7e-93 346.7 280 64.6
MD15G1347700 Malus domestica HOM05D006622 ORTHO05D007939 2.3e-93 346.3 276 65.9
ECA232G1829 Erigeron canadensis HOM05D006622 ORTHO05D007939 5.1e-93 345.1 268 68.3
Thecc.08G125800 Theobroma cacao HOM05D006622 ORTHO05D007939 5.1e-93 345.1 276 65.6
Migut.N03281 Erythranthe guttata HOM05D006622 ORTHO05D007939 1.5e-92 343.6 276 67.0
THA.LOC104800197 Tarenaya hassleriana HOM05D006622 ORTHO05D007939 2.5e-92 342.8 286 64.0
Potri.005G178200 Populus trichocarpa HOM05D006622 ORTHO05D007939 4.3e-92 342.0 278 65.5
QL09p034510 Quercus lobata HOM05D006622 ORTHO05D007939 4.3e-92 342.0 279 63.8
CiPaw.06G031300 Carya illinoinensis HOM05D006622 ORTHO05D007939 7.3e-92 341.3 276 65.9
Thhalv10008385m.g Eutrema salsugineum HOM05D006622 ORTHO05D007939 9.6e-92 340.9 286 62.6
RcHm_v2.0_Chr6g0295871 Rosa chinensis HOM05D006622 ORTHO05D007939 1.6e-91 340.1 271 68.6
TWI60G0608 Tripterygium wilfordii HOM05D006622 ORTHO05D007939 1.6e-91 340.1 279 64.5
Manes.18G077500 Manihot esculenta HOM05D006622 ORTHO05D007939 3.6e-91 339.0 278 65.1
COL.COLO4_20860 Corchorus olitorius HOM05D006622 ORTHO05D007939 4.8e-91 338.6 294 63.6
Eucgr.F04350 Eucalyptus grandis HOM05D006622 ORTHO05D007939 6.2e-91 338.2 275 64.4
Prupe.1G495500 Prunus persica HOM05D006622 ORTHO05D007939 6.2e-91 338.2 276 64.1
Gohir.D05G270800 Gossypium hirsutum HOM05D006622 ORTHO05D007939 1.1e-90 337.4 277 64.6
Hund26807 Selenicereus undatus HOM05D006622 ORTHO05D007939 1.4e-90 337.0 283 61.5
Gorai.009G283400 Gossypium raimondii HOM05D006622 ORTHO05D007939 1.8e-90 336.7 277 64.6
CARHR022170 Cardamine hirsuta HOM05D006622 ORTHO05D007939 2.4e-90 336.3 270 64.8
Atru.chr13.1464 Acer truncatum HOM05D006622 ORTHO05D007939 3.1e-90 335.9 270 67.8
GSVIVG01008863001 Vitis vinifera HOM05D006622 ORTHO05D007939 3.1e-90 335.9 265 69.4
FAN15G0029 Fragaria x ananassa HOM05D006622 ORTHO05D007939 5.3e-90 335.1 271 67.5
Gohir.A05G268900 Gossypium hirsutum HOM05D006622 ORTHO05D007939 6.9e-90 334.7 277 64.3
Aqoxy5G02345 Aquilegia oxysepala HOM05D006622 ORTHO05D007939 9.0e-90 334.3 280 64.3
FvH4_2g26990 Fragaria vesca HOM05D006622 ORTHO05D007939 1.2e-89 334.0 271 67.9
FAN24G2914 Fragaria x ananassa HOM05D006622 ORTHO05D007939 1.2e-89 334.0 271 67.9
Lalb_Chr11g0065931 Lupinus albus HOM05D006622 ORTHO05D007939 1.5e-89 333.6 277 64.3
AT1G21790 Arabidopsis thaliana HOM05D006622 ORTHO05D007939 2.0e-89 333.2 281 61.6
arahy.Tifrunner.gnm1.ann1.29UIE3 Arachis hypogaea HOM05D006622 ORTHO05D007939 2.0e-89 333.2 279 62.0
Atru.chr13.1486 Acer truncatum HOM05D006622 ORTHO05D007939 2.6e-89 332.8 271 67.2
Aa31LG7G5770 Aethionema arabicum HOM05D006622 ORTHO05D007939 2.6e-89 332.8 272 64.0
Duzib093G0047 Durio zibethinus HOM05D006622 ORTHO05D007939 2.6e-89 332.8 266 66.9
AL1G34990 Arabidopsis lyrata HOM05D006622 ORTHO05D007939 5.8e-89 331.6 281 61.6
C05p20800 Brassica napus HOM05D006622 ORTHO05D007939 5.8e-89 331.6 282 62.4
CsaV3_6G034460 Cucumis sativus L. HOM05D006622 ORTHO05D007939 7.6e-89 331.3 287 63.8
arahy.Tifrunner.gnm1.ann1.9BP3HC Arachis hypogaea HOM05D006622 ORTHO05D007939 1.3e-88 330.5 290 59.3
BcaB07g32178 Brassica carinata HOM05D006622 ORTHO05D007939 1.3e-88 330.5 278 61.9
MELO3C010612.2 Cucumis melo HOM05D006622 ORTHO05D007939 2.9e-88 329.3 287 62.7
Carub.0001s2125 Capsella rubella HOM05D006622 ORTHO05D007939 4.9e-88 328.6 286 60.5
Medtr3g088060 Medicago truncatula HOM05D006622 ORTHO05D007939 4.9e-88 328.6 277 63.9
TPR.G21062 Trifolium pratense HOM05D006622 ORTHO05D007939 6.4e-88 328.2 270 67.0
Lj1g0017707 Lotus japonicus HOM05D006622 ORTHO05D007939 8.4e-88 327.8 278 65.5
BolC5t30779H Brassica oleracea HOM05D006622 ORTHO05D007939 1.1e-87 327.4 282 62.1
Glyma.04G249500 Glycine max HOM05D006622 ORTHO05D007939 1.4e-87 327.0 287 62.7
BcaC05g26102 Brassica carinata HOM05D006622 ORTHO05D007939 1.9e-87 326.6 282 62.1
Ca_16559_v3 Cicer arietinum L. HOM05D006622 ORTHO05D007939 2.4e-87 326.2 281 62.6
ATR0584G160 Amborella trichopoda HOM05D006622 ORTHO05D007939 1.6e-86 323.6 269 63.6
EL10Ac1g01019 Beta vulgaris HOM05D006622 ORTHO05D007939 1.6e-86 323.6 280 61.1
VMungo1309G2133 Vigna mungo HOM05D006622 ORTHO05D007939 3.5e-86 322.4 272 64.7
A06p17900 Brassica napus HOM05D006622 ORTHO05D007939 2.3e-85 319.7 273 63.0
BraA06t24880Z Brassica rapa HOM05D006622 ORTHO05D007939 2.3e-85 319.7 273 63.0
Phvul.009G125300 Phaseolus vulgaris HOM05D006622 ORTHO05D007939 2.3e-85 319.7 272 65.1
Glyma.06G113400 Glycine max HOM05D006622 ORTHO05D007939 3.0e-85 319.3 284 61.6
Os01g0869600 Oryza sativa ssp. japonica HOM05D006622 ORTHO05D007939 3.0e-85 319.3 266 65.4
Zm00001eb146520 Zea mays HOM05D006622 ORTHO05D007939 5.1e-85 318.5 275 62.2
Zm00001eb366620 Zea mays HOM05D006622 ORTHO05D007939 6.7e-85 318.2 275 62.2
Haze_00437 Corylus avellana HOM05D006622 ORTHO05D007939 2.5e-84 316.2 347 54.5
CANSAT35G1811 Cannabis sativa HOM05D006622 ORTHO05D007939 3.3e-84 315.8 291 61.5
CANSAT35G0359 Cannabis sativa HOM05D006622 ORTHO05D007939 1.3e-83 313.9 291 61.9
PSO017G0487 Papaver somniferum HOM05D006622 ORTHO05D007939 1.1e-82 310.8 279 62.0
PSO478G0228 Papaver somniferum HOM05D006622 ORTHO05D007939 1.5e-81 307.0 273 63.4
HPP92_013761 Vanilla planifolia HOM05D006622 ORTHO05D007939 2.6e-81 306.2 282 57.1
Sc15g0002770 Simmondsia chinensis HOM05D006622 ORTHO05D007939 6.7e-77 291.6 281 55.9
AUR62014332 Chenopodium quinoa HOM05D006622 ORTHO05D007939 3.2e-71 272.7 274 56.2
Peaxi162Scf01270g00111 Petunia axillaris HOM05D006622 ORTHO05D007939 1.2e-70 270.8 274 58.8
Sed0026599 Sechium edule HOM05D006622 ORTHO05D007939 4.3e-68 262.3 183 71.6
AUR62019075 Chenopodium quinoa HOM05D006622 ORTHO05D007939 7.4e-68 261.5 200 68.0
PGSC0003DMG400007898 Solanum tuberosum HOM05D006622 ORTHO05D007939 8.2e-67 258.1 141 91.5
FAN20G1317 Fragaria x ananassa HOM05D006622 ORTHO05D007939 1.3e-64 250.8 177 73.4
MD08G1162300 Malus domestica HOM05D006622 ORTHO05D007939 4.6e-62 242.3 180 66.1
Oeu040413.1 Olea europaea HOM05D006622 ORTHO05D007939 5.9e-57 225.3 180 64.4
Mapoly0055s0084 Marchantia polymorpha HOM05D006622 ORTHO05D007939 7.7e-57 224.9 273 46.2
SMO351G0129 Selaginella moellendorffii HOM05D006622 ORTHO05D007939 1.6e-54 217.2 275 46.9
Nitab4.5_0000968g0040 Nicotiana tabacum HOM05D006622 ORTHO05D007939 2.1e-54 216.9 278 50.4
Sp1g19350 Schrenkiella parvula HOM05D006622 ORTHO05D007939 1.5e-52 210.7 138 72.5
Cpa.g.sc64.93 Carica papaya HOM05D006622 ORTHO05D007939 7.0e-50 201.8 180 62.8
Pp3c12_11900 Physcomitrium patens HOM05D006622 ORTHO05D007939 5.0e-48 195.7 279 42.7
ClCG08G005670 Citrullus lanatus HOM05D006622 ORTHO05D007939 2.5e-47 193.4 181 58.6
CDE08G0135 Ceratophyllum demersum HOM05D006622 ORTHO05D007939 1.8e-45 187.2 276 43.1
Psat5g087320 Pisum sativum HOM05D006622 ORTHO05D007939 8.8e-45 184.9 170 61.8
CDE06G0548 Ceratophyllum demersum HOM05D006622 ORTHO05D007939 1.1e-39 167.9 152 59.2
AagrBONN_evm.TU.Sc2ySwM_117.1000 Anthoceros agrestis HOM05D006622 ORTHO05D007939 1.8e-37 160.6 219 45.2
Nn5g28301 Nelumbo nucifera HOM05D006622 ORTHO05D007939 5.7e-36 155.6 282 40.1
Lj7C341T13 Lonicera japonica HOM05D006622 ORTHO05D007939 4.4e-28 129.4 94 69.1
CBR_g40088 Chara braunii HOM05D006622 ORTHO05D007939 1.3e-24 117.9 156 45.5
Aa31LG4G7650 Aethionema arabicum HOM05D006622 ORTHO05D007939 1.6e-22 110.9 78 69.2
Actinidia03468 Actinidia chinensis HOM05D006622 ORTHO05D007939 1.2e-20 104.8 277 32.1
Prupe.1G512700 Prunus persica HOM05D006622 ORTHO05D007939 8.3e-19 98.6 76 63.2
AagrBONN_evm.TU.Sc2ySwM_117.972 Anthoceros agrestis HOM05D006622 ORTHO05D007939 3.3e-15 86.7 176 40.9
Lj7C341T14 Lonicera japonica HOM05D006622 ORTHO05D007939 9.5e-15 85.1 77 58.4
Aa31LG4G7660 Aethionema arabicum HOM05D006622 ORTHO05D007939 4.7e-14 82.8 67 62.7
unitig_748.g7104 Utricularia gibba HOM05D006622 ORTHO05D007939 1.0e-08 65.1 76 47.4
AagrBONN_evm.TU.Sc2ySwM_117.993 Anthoceros agrestis HOM05D006622 ORTHO05D007939 1.7e-08 64.3 132 37.9
HPP92_013753 Vanilla planifolia HOM05D006622 ORTHO05D007939 1.9e-07 60.8 66 48.5


User provided reference genes

Program Settings