Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen01g031320 Solanum pennellii HOM05D006641 ORTHO05D007573 3.5e-109 398.3 197 100.0
Solyc01g079550.2 Solanum lycopersicum HOM05D006641 ORTHO05D007573 8.6e-108 393.7 197 99.0
PGSC0003DMG400009037 Solanum tuberosum HOM05D006641 ORTHO05D007573 2.7e-101 372.1 198 93.9
Nitab4.5_0001301g0080 Nicotiana tabacum HOM05D006641 ORTHO05D007573 1.7e-84 316.2 208 79.3
Peaxi162Scf00691g00003 Petunia axillaris HOM05D006641 ORTHO05D007573 1.1e-83 313.5 201 79.6
Nitab4.5_0008979g0010 Nicotiana tabacum HOM05D006641 ORTHO05D007573 5.2e-81 304.7 203 77.8
Oeu008464.1 Olea europaea HOM05D006641 ORTHO05D007573 1.3e-60 236.9 201 61.7
Hma1.2p1_0486F.1_g163110 Hydrangea macrophylla HOM05D006641 ORTHO05D007573 2.4e-54 216.1 197 56.3
Hma1.2p1_0486F.1_g163121 Hydrangea macrophylla HOM05D006641 ORTHO05D007573 2.4e-54 216.1 197 56.3
Migut.D00088 Erythranthe guttata HOM05D006641 ORTHO05D007573 7.1e-54 214.5 208 56.2
SGA_v2.0_scaffold376G50279 Striga asiatica HOM05D006641 ORTHO05D007573 1.3e-50 203.8 203 55.7
SalBow3G3599 Salvia bowleyana HOM05D006641 ORTHO05D007573 2.1e-50 203.0 200 53.5
Cc01_g21330 Coffea canephora HOM05D006641 ORTHO05D007573 1.5e-48 196.8 222 50.9
DCAR_005769 Daucus carota HOM05D006641 ORTHO05D007573 3.4e-48 195.7 205 49.8
DCAR_002902 Daucus carota HOM05D006641 ORTHO05D007573 1.7e-47 193.4 203 50.2
CSS0030498 Camellia sinensis var. sinensis HOM05D006641 ORTHO05D007573 3.8e-47 192.2 201 53.2
Atru.chr5.1033 Acer truncatum HOM05D006641 ORTHO05D007573 4.9e-47 191.8 210 50.0
Duzib138G1609 Durio zibethinus HOM05D006641 ORTHO05D007573 6.5e-47 191.4 209 50.7
QL12p020167 Quercus lobata HOM05D006641 ORTHO05D007573 1.9e-46 189.9 198 51.0
Sabra02G0160400 Salix brachista HOM05D006641 ORTHO05D007573 1.9e-46 189.9 191 54.5
Dinv33109 Davidia involucrata HOM05D006641 ORTHO05D007573 2.5e-46 189.5 195 54.4
Gorai.001G143700 Gossypium raimondii HOM05D006641 ORTHO05D007573 7.1e-46 188.0 210 50.5
Gohir.D07G132300 Gossypium hirsutum HOM05D006641 ORTHO05D007573 9.3e-46 187.6 210 50.5
Thecc.01G311800 Theobroma cacao HOM05D006641 ORTHO05D007573 9.3e-46 187.6 187 52.4
CsaV3_7G029900 Cucumis sativus L. HOM05D006641 ORTHO05D007573 1.6e-45 186.8 200 51.0
Gohir.A07G127900 Gossypium hirsutum HOM05D006641 ORTHO05D007573 2.7e-45 186.0 210 50.0
Nn3g21666 Nelumbo nucifera HOM05D006641 ORTHO05D007573 4.6e-45 185.3 206 51.5
Manes.05G002600 Manihot esculenta HOM05D006641 ORTHO05D007573 1.0e-44 184.1 195 51.8
Sed0015554 Sechium edule HOM05D006641 ORTHO05D007573 1.3e-44 183.7 187 50.8
ClCG09G005170 Citrullus lanatus HOM05D006641 ORTHO05D007573 2.3e-44 183.0 201 51.7
Cfa005814 Carpinus fangiana HOM05D006641 ORTHO05D007573 1.5e-43 180.3 204 52.0
MELO3C015931.2 Cucumis melo HOM05D006641 ORTHO05D007573 1.5e-43 180.3 200 50.5
Duzib133G1491 Durio zibethinus HOM05D006641 ORTHO05D007573 1.5e-43 180.3 205 48.8
Duzib211G0496 Durio zibethinus HOM05D006641 ORTHO05D007573 1.5e-43 180.3 209 47.8
Potri.002G196900 Populus trichocarpa HOM05D006641 ORTHO05D007573 1.5e-43 180.3 191 50.8
vmacro02409 Vaccinium macrocarpon HOM05D006641 ORTHO05D007573 4.3e-43 178.7 209 50.7
Medtr1g087230 Medicago truncatula HOM05D006641 ORTHO05D007573 7.4e-43 177.9 203 46.3
PGR119G1902 Punica granatum HOM05D006641 ORTHO05D007573 9.6e-43 177.6 209 47.8
Hma1.2p1_0212F.1_g090010 Hydrangea macrophylla HOM05D006641 ORTHO05D007573 2.1e-42 176.4 205 49.8
Lsat_1_v5_gn_9_2880 Lactuca sativa HOM05D006641 ORTHO05D007573 2.1e-42 176.4 202 47.5
Eucgr.H01054 Eucalyptus grandis HOM05D006641 ORTHO05D007573 2.8e-42 176.0 188 51.6
Prupe.8G270900 Prunus persica HOM05D006641 ORTHO05D007573 2.8e-42 176.0 208 48.6
TWI36G0114 Tripterygium wilfordii HOM05D006641 ORTHO05D007573 4.8e-42 175.3 204 50.0
HanXRQChr15g0465011 Helianthus annuus HOM05D006641 ORTHO05D007573 8.2e-42 174.5 197 48.7
Sabra14G0090500 Salix brachista HOM05D006641 ORTHO05D007573 1.1e-41 174.1 202 50.0
Ciclev10021856m.g Citrus clementina HOM05D006641 ORTHO05D007573 1.4e-41 173.7 190 50.0
ECA247G2557 Erigeron canadensis HOM05D006641 ORTHO05D007573 2.4e-41 172.9 190 53.2
FAN13G0974 Fragaria x ananassa HOM05D001136 ORTHO05D007573 2.4e-41 172.9 203 49.8
Potri.014G122100 Populus trichocarpa HOM05D006641 ORTHO05D007573 2.4e-41 172.9 204 51.5
TAR362G0542 Trochodendron aralioides HOM05D006641 ORTHO05D007573 2.4e-41 172.9 189 48.1
Rhsim13G0005400 Rhododendron simsii HOM05D006641 ORTHO05D007573 3.1e-41 172.6 206 49.0
Lalb_Chr02g0146781 Lupinus albus HOM05D006641 ORTHO05D007573 6.9e-41 171.4 198 48.0
CiPaw.07G116300 Carya illinoinensis HOM05D006641 ORTHO05D007573 1.2e-40 170.6 204 48.0
Lj5g0026629 Lotus japonicus HOM05D006641 ORTHO05D007573 1.2e-40 170.6 208 47.1
MBI18_g28444_MAGBIO Magnolia biondii HOM05D006641 ORTHO05D007573 1.2e-40 170.6 190 47.4
Ca_10290_v3 Cicer arietinum L. HOM05D006641 ORTHO05D007573 1.5e-40 170.2 207 46.4
Ca_30054_v3 Cicer arietinum L. HOM05D006641 ORTHO05D007573 1.5e-40 170.2 207 46.4
FAN04G2480 Fragaria x ananassa HOM05D001136 ORTHO05D007573 1.5e-40 170.2 203 48.3
RcHm_v2.0_Chr7g0241631 Rosa chinensis HOM05D006641 ORTHO05D007573 1.5e-40 170.2 203 47.8
FAN08G0230 Fragaria x ananassa HOM05D001136 ORTHO05D007573 2.6e-40 169.5 203 49.3
FAN08G2922 Fragaria x ananassa HOM05D006641 ORTHO05D007573 2.6e-40 169.5 203 49.3
FAN18G1732 Fragaria x ananassa HOM05D001136 ORTHO05D007573 2.6e-40 169.5 203 49.3
FvH4_5g39350 Fragaria vesca HOM05D006641 ORTHO05D007573 4.5e-40 168.7 205 47.8
PSO210G6531 Papaver somniferum HOM05D006641 ORTHO05D007573 4.5e-40 168.7 202 48.5
COL.COLO4_23247 Corchorus olitorius HOM05D006641 ORTHO05D007573 7.6e-40 167.9 183 48.1
VMungo1383G0778 Vigna mungo HOM05D006641 ORTHO05D007573 7.6e-40 167.9 195 45.1
Aqoxy2G01829 Aquilegia oxysepala HOM05D006641 ORTHO05D007573 1.3e-39 167.2 192 46.4
Lalb_Chr15g0078301 Lupinus albus HOM05D006641 ORTHO05D007573 1.3e-39 167.2 204 49.0
TPR.G19761 Trifolium pratense HOM05D006641 ORTHO05D007573 1.7e-39 166.8 206 45.6
VMungo0007G0001 Vigna mungo HOM05D006641 ORTHO05D007573 1.7e-39 166.8 200 46.5
Actinidia27614 Actinidia chinensis HOM05D006641 ORTHO05D007573 2.9e-39 166.0 186 51.6
MD03G1296400 Malus domestica HOM05D006641 ORTHO05D007573 3.8e-39 165.6 204 50.0
Glyma.10G013800 Glycine max HOM05D006641 ORTHO05D007573 1.1e-38 164.1 205 44.4
Glyma.19G215600 Glycine max HOM05D006641 ORTHO05D007573 1.1e-38 164.1 202 46.0
Phvul.001G212200 Phaseolus vulgaris HOM05D006641 ORTHO05D007573 1.1e-38 164.1 201 44.3
PSO761G0656 Papaver somniferum HOM05D006641 ORTHO05D007573 1.4e-38 163.7 202 49.0
Manes.01G226800 Manihot esculenta HOM05D006641 ORTHO05D007573 1.9e-38 163.3 201 47.8
AUR62024668 Chenopodium quinoa HOM05D006641 ORTHO05D007573 2.5e-38 162.9 199 45.2
Glyma.03G218800 Glycine max HOM05D006641 ORTHO05D007573 4.2e-38 162.2 197 45.2
Psat6g162160 Pisum sativum HOM05D006641 ORTHO05D007573 9.3e-38 161.0 200 44.5
Glyma.02G013200 Glycine max HOM05D006641 ORTHO05D007573 1.2e-37 160.6 196 43.4
Lj1g0024392 Lotus japonicus HOM05D006641 ORTHO05D007573 1.2e-37 160.6 202 45.0
AUR62011824 Chenopodium quinoa HOM05D006641 ORTHO05D007573 1.6e-37 160.2 199 44.7
EL10As5g23515 Beta vulgaris HOM05D006641 ORTHO05D007573 3.5e-37 159.1 199 47.2
CANSAT25G1473 Cannabis sativa HOM05D006641 ORTHO05D007573 3.5e-37 159.1 206 45.1
Gorai.004G144000 Gossypium raimondii HOM05D006641 ORTHO05D007573 4.6e-37 158.7 197 48.2
Haze_05028 Corylus avellana HOM05D006641 ORTHO05D007573 6.1e-37 158.3 184 51.6
Gohir.D08G139900 Gossypium hirsutum HOM05D006641 ORTHO05D007573 6.1e-37 158.3 197 48.2
Phvul.007G214900 Phaseolus vulgaris HOM05D006641 ORTHO05D007573 6.1e-37 158.3 203 43.3
Ah.11g049320 Amaranthus hybridus HOM05D000446 ORTHO05D000321 1.3e-36 157.1 200 44.0
MBI19_g24818_MAGBIO Magnolia biondii HOM05D006641 ORTHO05D007573 2.3e-36 156.4 187 43.9
Gohir.A08G119133 Gossypium hirsutum HOM05D006641 ORTHO05D007573 3.9e-36 155.6 197 47.7
Psat3g020560 Pisum sativum HOM05D006641 ORTHO05D007573 3.9e-36 155.6 199 42.2
Cpa.g.sc18.26 Carica papaya HOM05D006641 ORTHO05D007573 1.1e-35 154.1 209 45.0
MD11G1315800 Malus domestica HOM05D006641 ORTHO05D007573 2.5e-35 152.9 203 45.3
Gohir.A12G125900 Gossypium hirsutum HOM05D006641 ORTHO05D007573 3.3e-35 152.5 197 44.7
Medtr7g109410 Medicago truncatula HOM05D006641 ORTHO05D007573 5.7e-35 151.8 199 41.2
arahy.Tifrunner.gnm1.ann1.DB9XMS Arachis hypogaea HOM05D006641 ORTHO05D007573 4.8e-34 148.7 207 42.0
Gohir.D12G129400 Gossypium hirsutum HOM05D006641 ORTHO05D007573 4.8e-34 148.7 187 43.3
Gorai.008G140500 Gossypium raimondii HOM05D006641 ORTHO05D007573 4.8e-34 148.7 187 43.3
TAR589G0002 Trochodendron aralioides HOM05D006641 ORTHO05D007573 5.3e-33 145.2 166 47.0
TAR633G2793 Trochodendron aralioides HOM05D006641 ORTHO05D007573 5.3e-33 145.2 166 47.0
PSO357G0224 Papaver somniferum HOM05D006641 ORTHO05D007573 3.4e-32 142.5 208 44.7
ATR0706G193 Amborella trichopoda HOM05D006641 ORTHO05D007573 1.1e-30 137.5 207 40.6
PSO170G1046 Papaver somniferum HOM05D006641 ORTHO05D007573 2.5e-30 136.3 208 43.8
CiPaw.08G090800 Carya illinoinensis HOM05D006641 ORTHO05D007573 3.9e-28 129.0 206 40.8
THA.LOC104801302 Tarenaya hassleriana HOM05D006641 ORTHO05D007573 3.7e-26 122.5 217 39.6
C09p01650 Brassica napus HOM05D001136 ORTHO05D007573 2.9e-23 112.8 222 38.3
BcaC04g24036 Brassica carinata HOM05D001136 ORTHO05D007573 3.8e-23 112.5 222 38.3
BolC9t53098H Brassica oleracea HOM05D001136 ORTHO05D007573 3.8e-23 112.5 222 38.3
CARHR249590 Cardamine hirsuta HOM05D006641 ORTHO05D007573 1.1e-22 110.9 213 38.0
A09p01550 Brassica napus HOM05D006641 ORTHO05D007573 7.2e-22 108.2 204 39.2
BcaB01g02078 Brassica carinata HOM05D006641 ORTHO05D007573 1.6e-21 107.1 221 36.2
BraA09t35814Z Brassica rapa HOM05D001136 ORTHO05D007573 1.6e-21 107.1 214 37.4
Sp6g01980 Schrenkiella parvula HOM05D006641 ORTHO05D007573 2.7e-21 106.3 223 35.9
AT4G02090 Arabidopsis thaliana HOM05D006641 ORTHO05D007573 3.9e-20 102.4 197 38.6
AL6G51140 Arabidopsis lyrata HOM05D006641 ORTHO05D007573 5.1e-20 102.1 213 35.2
arahy.Tifrunner.gnm1.ann1.Q9I7GX Arachis hypogaea HOM05D006641 ORTHO05D007573 8.8e-20 101.3 170 37.6
Aa31LG5G1730 Aethionema arabicum HOM05D006641 ORTHO05D007573 2.0e-19 100.1 208 36.5
Eucgr.K03540 Eucalyptus grandis HOM05D006641 ORTHO05D007573 5.7e-19 98.6 207 35.3
Zm00001eb396340 Zea mays HOM05D006641 ORTHO05D007573 1.3e-18 97.4 211 31.8
TPR.G4797 Trifolium pratense HOM05D006641 ORTHO05D007573 1.7e-18 97.1 149 38.9
Carub.0006s3513 Capsella rubella HOM05D006641 ORTHO05D007573 6.3e-18 95.1 222 36.9
Thhalv10029320m.g Eutrema salsugineum HOM05D006641 ORTHO05D007573 8.2e-18 94.7 213 33.8
Os03g0305200 Oryza sativa ssp. japonica HOM05D006641 ORTHO05D007573 1.8e-17 93.6 219 30.1
CDE05G1007 Ceratophyllum demersum HOM05D006641 ORTHO05D007573 5.0e-15 85.5 121 39.7
Actinidia21410 Actinidia chinensis HOM05D000446 ORTHO05D000321 2.1e-13 80.1 99 46.5
HPP92_018375 Vanilla planifolia HOM05D006641 ORTHO05D007573 1.0e-12 77.8 189 31.2
TWI75G0789 Tripterygium wilfordii HOM05D006641 ORTHO05D007573 2.0e-11 73.6 103 41.7
SEGI_04656 Sequoiadendron giganteum HOM05D001935 ORTHO05D001700 4.8e-10 68.9 183 31.1
RcHm_v2.0_Chr7g0178221 Rosa chinensis HOM05D007478 ORTHO05D001700 8.2e-10 68.2 180 30.6
Cc04_g06130 Coffea canephora HOM05D007478 ORTHO05D001700 1.1e-09 67.8 180 31.7
Zm00001eb014520 Zea mays HOM05D006641 ORTHO05D007573 1.8e-09 67.0 201 29.9
FAN13G0345 Fragaria x ananassa HOM05D007478 ORTHO05D001700 4.1e-09 65.9 178 30.3
FvH4_5g17470 Fragaria vesca HOM05D007478 ORTHO05D001700 7.0e-09 65.1 178 29.8
SEGI_14616 Sequoiadendron giganteum HOM05D001935 ORTHO05D001700 7.0e-09 65.1 184 28.8
COL.COLO4_05000 Corchorus olitorius HOM05D007478 ORTHO05D001700 1.6e-08 63.9 177 31.6
FAN18G0488 Fragaria x ananassa HOM05D007478 ORTHO05D001700 1.6e-08 63.9 178 29.2
FAN08G3433 Fragaria x ananassa HOM05D007478 ORTHO05D001700 2.0e-08 63.5 154 32.5
Lj4g0014270 Lotus japonicus HOM05D007478 ORTHO05D001700 2.0e-08 63.5 177 30.5
VMungo0251G2682 Vigna mungo HOM05D007478 ORTHO05D001700 2.0e-08 63.5 177 31.6
Manes.14G171900 Manihot esculenta HOM05D007478 ORTHO05D001700 3.5e-08 62.8 180 28.3
ATR0326G051 Amborella trichopoda HOM05D001935 ORTHO05D001700 5.9e-08 62.0 177 29.4
CiPaw.15G144400 Carya illinoinensis HOM05D007478 ORTHO05D001700 1.0e-07 61.2 179 29.1
Thecc.03G058400 Theobroma cacao HOM05D007478 ORTHO05D001700 1.0e-07 61.2 112 35.7
SalBow6G0372 Salvia bowleyana HOM05D006641 ORTHO05D007573 1.3e-07 60.8 55 50.9
DCAR_007278 Daucus carota HOM05D001935 ORTHO05D001700 2.2e-07 60.1 88 39.8
MD06G1228100 Malus domestica HOM05D007478 ORTHO05D001700 2.2e-07 60.1 182 27.5
TAR629G0885 Trochodendron aralioides HOM05D007478 ORTHO05D001700 2.2e-07 60.1 181 28.7
DCAR_025887 Daucus carota HOM05D001935 ORTHO05D001700 2.9e-07 59.7 68 42.6
Sed0016646 Sechium edule HOM05D007478 ORTHO05D001700 2.9e-07 59.7 193 30.6
CDE06G0938 Ceratophyllum demersum HOM05D001935 ORTHO05D001700 5.0e-07 58.9 93 35.5
Glyma.05G246800 Glycine max HOM05D007478 ORTHO05D001700 5.0e-07 58.9 111 38.7
Lsat_1_v5_gn_3_82980 Lactuca sativa HOM05D001935 ORTHO05D001700 5.0e-07 58.9 186 30.6
COL.COLO4_03618 Corchorus olitorius HOM05D001935 ORTHO05D001700 6.5e-07 58.5 183 27.3
Lj6P749T50 Lonicera japonica HOM05D001935 ORTHO05D001700 6.5e-07 58.5 183 27.3
RcHm_v2.0_Chr3g0493681 Rosa chinensis HOM05D001935 ORTHO05D001700 6.5e-07 58.5 181 28.7
SEGI_32719 Sequoiadendron giganteum HOM05D001935 ORTHO05D001700 6.5e-07 58.5 182 29.1
MELO3C017371.2 Cucumis melo HOM05D007478 ORTHO05D001700 8.5e-07 58.2 193 30.1
Gohir.A11G059300 Gossypium hirsutum HOM05D002829 ORTHO05D003124 8.5e-07 58.2 189 27.5
Phvul.002G330900 Phaseolus vulgaris HOM05D007478 ORTHO05D001700 8.5e-07 58.2 177 29.9
Gorai.007G068500 Gossypium raimondii HOM05D002829 ORTHO05D003124 1.1e-06 57.8 189 27.5
Ca_17182_v3 Cicer arietinum L. HOM05D007478 ORTHO05D001700 1.5e-06 57.4 190 27.9
Glyma.08G055200 Glycine max HOM05D007478 ORTHO05D001700 1.5e-06 57.4 179 27.4
THA.LOC104802908 Tarenaya hassleriana HOM05D001935 ORTHO05D001700 1.5e-06 57.4 187 28.9
ATR0326G068 Amborella trichopoda HOM05D001935 ORTHO05D001700 1.9e-06 57.0 93 36.6
FAN04G1368 Fragaria x ananassa HOM05D007478 ORTHO05D001700 1.9e-06 57.0 108 34.3
Gohir.D11G063400 Gossypium hirsutum HOM05D002829 ORTHO05D003124 1.9e-06 57.0 184 28.3
Lalb_Chr05g0221601 Lupinus albus HOM05D007478 ORTHO05D001700 2.5e-06 56.6 180 28.3
MBI10_g37756_MAGBIO Magnolia biondii HOM05D001935 ORTHO05D001700 2.5e-06 56.6 65 40.0
Sabra01G0049600 Salix brachista HOM05D002829 ORTHO05D003124 2.5e-06 56.6 195 29.2
QL10p030590 Quercus lobata HOM05D007478 ORTHO05D001700 3.2e-06 56.2 112 36.6
FAN07G1185 Fragaria x ananassa HOM05D001935 ORTHO05D001700 4.2e-06 55.8 179 30.2
PGR042G0803 Punica granatum HOM05D001935 ORTHO05D001700 4.2e-06 55.8 178 27.5
FAN17G0536 Fragaria x ananassa HOM05D001935 ORTHO05D001700 7.2e-06 55.1 179 29.1
Potri.003G160000 Populus trichocarpa HOM05D002829 ORTHO05D003124 7.2e-06 55.1 187 28.3
Aqoxy3G00069 Aquilegia oxysepala HOM05D001935 ORTHO05D001700 9.4e-06 54.7 185 28.6
SGA_v2.0_scaffold14G06923 Striga asiatica HOM05D001935 ORTHO05D001700 9.4e-06 54.7 119 30.3
TAR622G0550 Trochodendron aralioides HOM05D002829 ORTHO05D003124 9.4e-06 54.7 208 27.9


User provided reference genes

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