Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen01g030650 Solanum pennellii HOM05D006977 ORTHO05D008738 1.5e-95 352.8 181 100.0
Solyc01g080830.3 Solanum lycopersicum HOM05D006977 ORTHO05D008738 4.6e-92 341.3 181 96.7
PGSC0003DMG400001120 Solanum tuberosum HOM05D006977 ORTHO05D008738 2.4e-88 328.9 177 95.5
CAN.G100.60 Capsicum annuum HOM05D006977 ORTHO05D008738 2.2e-57 226.1 124 88.7
Peaxi162Scf00309g00082 Petunia axillaris HOM05D006977 ORTHO05D008738 4.5e-55 218.4 122 87.7
Nitab4.5_0003092g0050 Nicotiana tabacum HOM05D006977 ORTHO05D008738 3.4e-50 202.2 137 74.5
Nitab4.5_0000222g0410 Nicotiana tabacum HOM05D006977 ORTHO05D008738 1.9e-45 186.4 109 82.6
CSS0050251 Camellia sinensis var. sinensis HOM05D006977 ORTHO05D008738 2.0e-42 176.4 157 60.5
DCAR_012297 Daucus carota HOM05D006977 ORTHO05D008738 1.3e-41 173.7 170 54.1
Dinv12080 Davidia involucrata HOM05D006977 ORTHO05D008738 1.7e-41 173.3 150 60.7
Cfa004914 Carpinus fangiana HOM05D006977 ORTHO05D008738 3.1e-40 169.1 159 59.1
Cc04_g01560 Coffea canephora HOM05D006977 ORTHO05D008738 4.1e-40 168.7 148 59.5
Haze_05149 Corylus avellana HOM05D006977 ORTHO05D008738 4.1e-40 168.7 159 59.1
Actinidia25872 Actinidia chinensis HOM05D006977 ORTHO05D008738 1.2e-39 167.2 154 58.4
Ca_17328_v3 Cicer arietinum L. HOM05D006977 ORTHO05D008738 3.5e-39 165.6 147 59.9
Lalb_Chr11g0071671 Lupinus albus HOM05D006977 ORTHO05D008738 5.9e-39 164.9 174 54.6
Cpa.g.sc112.76 Carica papaya HOM05D006977 ORTHO05D008738 1.0e-38 164.1 152 59.2
Lsat_1_v5_gn_7_107761 Lactuca sativa HOM05D006977 ORTHO05D008738 2.3e-38 162.9 157 58.0
Prupe.3G002600 Prunus persica HOM05D006977 ORTHO05D008738 2.3e-38 162.9 147 60.5
VMungo0720G2811 Vigna mungo HOM05D006977 ORTHO05D008738 2.3e-38 162.9 175 52.6
Hma1.2p1_0484F.1_g162990 Hydrangea macrophylla HOM05D006977 ORTHO05D008738 2.9e-38 162.5 169 53.8
GSVIVG01028248001 Vitis vinifera HOM05D006977 ORTHO05D008738 3.9e-38 162.2 174 53.4
Thecc.01G325400 Theobroma cacao HOM05D006977 ORTHO05D008738 5.0e-38 161.8 145 61.4
Phvul.L002843 Phaseolus vulgaris HOM05D006977 ORTHO05D008738 8.6e-38 161.0 151 58.3
Ciclev10022352m.g Citrus clementina HOM05D006977 ORTHO05D008738 1.5e-37 160.2 171 54.4
Glyma.04G053700 Glycine max HOM05D006977 ORTHO05D008738 1.5e-37 160.2 150 59.3
HanXRQChr15g0493961 Helianthus annuus HOM05D006977 ORTHO05D008738 1.9e-37 159.8 164 56.1
TAR362G0624 Trochodendron aralioides HOM05D006977 ORTHO05D008738 1.9e-37 159.8 161 55.3
Cpa.g.sc57.16 Carica papaya HOM05D006977 ORTHO05D008738 2.5e-37 159.5 152 57.2
Sabra14G0082500 Salix brachista HOM05D006977 ORTHO05D008738 2.5e-37 159.5 146 59.6
Rhsim01G0293500 Rhododendron simsii HOM05D006977 ORTHO05D008738 3.3e-37 159.1 153 56.2
COL.COLO4_23128 Corchorus olitorius HOM05D006977 ORTHO05D008738 4.3e-37 158.7 138 62.3
TWI81G0461 Tripterygium wilfordii HOM05D006977 ORTHO05D008738 4.3e-37 158.7 152 58.6
Manes.05G008900 Manihot esculenta HOM05D006977 ORTHO05D008738 5.6e-37 158.3 156 57.7
Eucgr.A01003 Eucalyptus grandis HOM05D006977 ORTHO05D008738 7.3e-37 157.9 146 59.6
MSTRG.6995 Avicennia marina HOM05D006977 ORTHO05D008738 9.5e-37 157.5 166 53.0
Medtr8g103265 Medicago truncatula HOM05D006977 ORTHO05D008738 9.5e-37 157.5 149 57.0
Potri.014G112200 Populus trichocarpa HOM05D006977 ORTHO05D008738 9.5e-37 157.5 146 60.3
RcHm_v2.0_Chr3g0485771 Rosa chinensis HOM05D006977 ORTHO05D008738 9.5e-37 157.5 163 54.0
Hund02455 Selenicereus undatus HOM05D006977 ORTHO05D008738 9.5e-37 157.5 143 53.1
ECA236G2063 Erigeron canadensis HOM05D006977 ORTHO05D008738 1.2e-36 157.1 146 57.5
Glyma.10G137900 Glycine max HOM05D006977 ORTHO05D008738 1.2e-36 157.1 149 59.1
Nn4g24845 Nelumbo nucifera HOM05D006977 ORTHO05D008738 1.2e-36 157.1 146 58.9
Psat7g015240 Pisum sativum HOM05D006977 ORTHO05D008738 1.6e-36 156.8 162 53.1
QL05p057365 Quercus lobata HOM05D006977 ORTHO05D008738 2.1e-36 156.4 155 58.7
Lj5g0006261 Lotus japonicus HOM05D006977 ORTHO05D008738 2.8e-36 156.0 146 56.2
MBI19_g30288_MAGBIO Magnolia biondii HOM05D006977 ORTHO05D008738 3.6e-36 155.6 169 50.9
CiPaw.08G082500 Carya illinoinensis HOM05D006977 ORTHO05D008738 1.0e-35 154.1 174 53.4
Carub.0006s3543 Capsella rubella HOM05D006977 ORTHO05D008738 1.4e-35 153.7 144 52.8
Migut.M01655 Erythranthe guttata HOM05D006977 ORTHO05D008738 2.3e-35 152.9 161 52.8
PSO357G0421 Papaver somniferum HOM05D006977 ORTHO05D008738 3.1e-35 152.5 146 54.8
SalBow5G4120 Salvia bowleyana HOM05D006977 ORTHO05D008738 3.1e-35 152.5 160 52.5
ClCG01G007180 Citrullus lanatus HOM05D006977 ORTHO05D008738 5.2e-35 151.8 147 59.2
Aa31LG5G1570 Aethionema arabicum HOM05D006977 ORTHO05D008738 6.8e-35 151.4 158 50.0
CsaV3_5G018620 Cucumis sativus L. HOM05D006977 ORTHO05D008738 8.9e-35 151.0 149 57.0
MELO3C005192.2 Cucumis melo HOM05D006977 ORTHO05D008738 1.5e-34 150.2 147 57.8
Duzib133G0680 Durio zibethinus HOM05D006977 ORTHO05D008738 1.5e-34 150.2 145 60.0
FAN23G2129 Fragaria x ananassa HOM05D006977 ORTHO05D008738 1.5e-34 150.2 179 51.4
Gohir.D11G109500 Gossypium hirsutum HOM05D006977 ORTHO05D008738 4.4e-34 148.7 152 55.9
Gorai.007G117100 Gossypium raimondii HOM05D006977 ORTHO05D008738 4.4e-34 148.7 152 55.9
PSO170G4516 Papaver somniferum HOM05D006977 ORTHO05D008738 4.4e-34 148.7 146 52.7
Atru.chr5.861 Acer truncatum HOM05D006977 ORTHO05D008738 7.5e-34 147.9 146 58.2
Gohir.A11G104700 Gossypium hirsutum HOM05D006977 ORTHO05D008738 9.8e-34 147.5 152 54.6
MD09G1290400 Malus domestica HOM05D006977 ORTHO05D008738 9.8e-34 147.5 156 54.5
arahy.Tifrunner.gnm1.ann1.KP3I1I Arachis hypogaea HOM05D006977 ORTHO05D008738 1.3e-33 147.1 151 55.6
FAN19G2776 Fragaria x ananassa HOM05D006977 ORTHO05D008738 1.3e-33 147.1 179 49.7
BcaC01g06803 Brassica carinata HOM05D006977 ORTHO05D008738 2.2e-33 146.4 136 52.9
C03p38480 Brassica napus HOM05D006977 ORTHO05D008738 2.2e-33 146.4 136 52.9
BolC3t16121H Brassica oleracea HOM05D006977 ORTHO05D008738 2.2e-33 146.4 136 52.9
Sc02g0004000 Simmondsia chinensis HOM05D006977 ORTHO05D008738 2.2e-33 146.4 153 51.0
Aqoxy5G02822 Aquilegia oxysepala HOM05D006977 ORTHO05D008738 2.9e-33 146.0 142 55.6
FAN26G0658 Fragaria x ananassa HOM05D006977 ORTHO05D008738 3.7e-33 145.6 179 49.7
PGR042G1466 Punica granatum HOM05D006977 ORTHO05D008738 3.7e-33 145.6 145 53.1
Lj1A7G42 Lonicera japonica HOM05D006977 ORTHO05D008738 4.9e-33 145.2 127 60.6
vmacro15094 Vaccinium macrocarpon HOM05D006977 ORTHO05D008738 1.1e-32 144.1 132 58.3
AUR62020194 Chenopodium quinoa HOM05D006977 ORTHO05D008738 1.4e-32 143.7 153 48.4
AT4G01790 Arabidopsis thaliana HOM05D006977 ORTHO05D008738 2.4e-32 142.9 136 52.2
BcaB01g02378 Brassica carinata HOM05D006977 ORTHO05D008738 3.2e-32 142.5 136 50.7
Thhalv10029024m.g Eutrema salsugineum HOM05D006977 ORTHO05D008738 5.4e-32 141.7 137 52.6
THA.LOC104799825 Tarenaya hassleriana HOM05D006977 ORTHO05D008738 5.4e-32 141.7 163 49.1
HPP92_012764 Vanilla planifolia HOM05D006977 ORTHO05D008738 5.4e-32 141.7 147 50.3
CARHR249760 Cardamine hirsuta HOM05D006977 ORTHO05D008738 7.0e-32 141.4 168 43.5
Sed0019401 Sechium edule HOM05D006977 ORTHO05D008738 9.2e-32 141.0 147 55.1
A03p31490 Brassica napus HOM05D006977 ORTHO05D008738 1.2e-31 140.6 136 51.5
BraA03t12329Z Brassica rapa HOM05D006977 ORTHO05D008738 1.2e-31 140.6 136 51.5
AUR62007556 Chenopodium quinoa HOM05D006977 ORTHO05D008738 1.2e-31 140.6 153 48.4
FAN28G2841 Fragaria x ananassa HOM05D006977 ORTHO05D008738 1.2e-31 140.6 174 50.0
ATR0796G043 Amborella trichopoda HOM05D006977 ORTHO05D008738 1.6e-31 140.2 158 50.0
arahy.Tifrunner.gnm1.ann1.PT1J72 Arachis hypogaea HOM05D006977 ORTHO05D008738 2.7e-31 139.4 150 54.0
Duzib268G1378 Durio zibethinus HOM05D006977 ORTHO05D008738 2.7e-31 139.4 128 57.8
Sp3g31270 Schrenkiella parvula HOM05D006977 ORTHO05D008738 4.6e-31 138.7 168 44.6
SpUn0082_0020 Schrenkiella parvula HOM05D006977 ORTHO05D008738 4.6e-31 138.7 168 44.6
AL6G51510 Arabidopsis lyrata HOM05D006977 ORTHO05D008738 7.8e-31 137.9 136 51.5
Duzib268G1723 Durio zibethinus HOM05D006977 ORTHO05D008738 1.7e-30 136.7 140 55.7
SGA_v2.0_scaffold204G41642 Striga asiatica HOM05D006977 ORTHO05D008738 3.0e-30 136.0 159 49.7
FvH4_1g26230 Fragaria vesca HOM05D006977 ORTHO05D008738 6.6e-30 134.8 146 52.7
Oeu031543.1 Olea europaea HOM05D006977 ORTHO05D008738 1.9e-29 133.3 156 48.7
TPR.G23504 Trifolium pratense HOM05D006977 ORTHO05D008738 7.3e-29 131.3 115 59.1
CANSAT25G0488 Cannabis sativa HOM05D006977 ORTHO05D008738 2.1e-28 129.8 131 55.7
Zm00001eb328690 Zea mays HOM05D006977 ORTHO05D008738 6.2e-28 128.3 145 46.9
Os07g0636400 Oryza sativa ssp. japonica HOM05D006977 ORTHO05D008738 1.1e-27 127.5 146 45.2
Duzib268G1823 Durio zibethinus HOM05D006977 ORTHO05D008738 2.0e-26 123.2 128 55.5
unitig_8.g4039 Utricularia gibba HOM05D006977 ORTHO05D008738 2.0e-26 123.2 155 47.1
EL10Ac6g15579 Beta vulgaris HOM05D006977 ORTHO05D008738 3.7e-25 119.0 135 46.7
CiPaw.07G125600 Carya illinoinensis HOM05D006977 ORTHO05D008738 1.1e-24 117.5 153 51.6
Sp6g01640 Schrenkiella parvula HOM05D006977 ORTHO05D008738 3.0e-22 109.4 105 48.6
MD17G1285100 Malus domestica HOM05D006977 ORTHO05D008738 2.7e-15 86.3 66 63.6
CDE02G1393 Ceratophyllum demersum HOM05D006977 ORTHO05D008738 4.6e-15 85.5 75 53.3
CDE04G2744 Ceratophyllum demersum HOM05D006977 ORTHO05D008738 4.4e-10 68.9 102 36.3
Mapoly0147s0029 Marchantia polymorpha HOM05D006977 ORTHO05D008738 2.9e-09 66.2 121 34.7
Pp3c20_22530 Physcomitrium patens HOM05D006977 ORTHO05D008738 8.4e-09 64.7 128 32.8
Duzib138G1646 Durio zibethinus HOM05D006977 ORTHO05D008738 3.9e-06 55.8 63 50.8


User provided reference genes

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