Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen01g029770 Solanum pennellii HOM05D006941 ORTHO05D008361 1.8e-34 148.7 72 100.0
Solyc01g067820.3 Solanum lycopersicum HOM05D006941 ORTHO05D008361 8.7e-34 146.4 72 97.2
PGSC0003DMG400022846 Solanum tuberosum HOM05D006941 ORTHO05D008361 8.7e-34 146.4 72 97.2
Nitab4.5_0001624g0050 Nicotiana tabacum HOM05D006941 ORTHO05D008361 4.3e-33 144.1 72 95.8
Peaxi162Scf01067g00024 Petunia axillaris HOM05D006941 ORTHO05D008361 4.5e-30 134.0 69 91.3
CAN.G1327.4 Capsicum annuum HOM05D006941 ORTHO05D008361 3.8e-29 131.0 72 87.5
Actinidia32379 Actinidia chinensis HOM05D006941 ORTHO05D008361 1.1e-28 129.4 70 84.3
CSS0029112 Camellia sinensis var. sinensis HOM05D006941 ORTHO05D008361 7.1e-28 126.7 72 77.8
Oeu029280.1 Olea europaea HOM05D006941 ORTHO05D008361 2.7e-27 124.8 72 83.3
Prupe.1G143700 Prunus persica HOM05D006941 ORTHO05D008361 6.0e-27 123.6 72 80.6
PGR004G2827 Punica granatum HOM05D006941 ORTHO05D008361 3.0e-26 121.3 72 80.6
CiPaw.02G087700 Carya illinoinensis HOM05D006941 ORTHO05D008361 3.9e-26 120.9 72 76.4
FAN17G2868 Fragaria x ananassa HOM05D006941 ORTHO05D008361 8.7e-26 119.8 72 77.8
Lj5g0014316 Lotus japonicus HOM05D006941 ORTHO05D008361 8.7e-26 119.8 72 79.2
EL10As5g23584 Beta vulgaris HOM05D006941 ORTHO05D008361 1.1e-25 119.4 70 81.4
Gorai.005G056700 Gossypium raimondii HOM05D006941 ORTHO05D008361 1.5e-25 119.0 72 77.8
Oeu010965.1 Olea europaea HOM05D006941 ORTHO05D008361 1.5e-25 119.0 72 79.2
Eucgr.H03682 Eucalyptus grandis HOM05D006941 ORTHO05D008361 1.9e-25 118.6 72 76.4
FvH4_4g16990 Fragaria vesca HOM05D006941 ORTHO05D008361 2.5e-25 118.2 72 77.8
FAN07G2315 Fragaria x ananassa HOM05D006941 ORTHO05D008361 2.5e-25 118.2 72 77.8
FAN12G1403 Fragaria x ananassa HOM05D006941 ORTHO05D008361 2.5e-25 118.2 72 77.8
FAN12G3786 Fragaria x ananassa HOM05D006941 ORTHO05D008361 2.5e-25 118.2 72 77.8
Manes.03G190000 Manihot esculenta HOM05D006941 ORTHO05D008361 2.5e-25 118.2 72 77.8
RcHm_v2.0_Chr4g0420661 Rosa chinensis HOM05D006941 ORTHO05D008361 2.5e-25 118.2 72 77.8
SalBow1G8344 Salvia bowleyana HOM05D006941 ORTHO05D008361 2.5e-25 118.2 72 76.4
CARHR172790 Cardamine hirsuta HOM05D006941 ORTHO05D008361 3.3e-25 117.9 69 78.3
Gohir.A02G045400 Gossypium hirsutum HOM05D006941 ORTHO05D008361 4.3e-25 117.5 72 76.4
Gohir.D02G051400 Gossypium hirsutum HOM05D006941 ORTHO05D008361 4.3e-25 117.5 72 76.4
HanXRQChr05g0154771 Helianthus annuus HOM05D006941 ORTHO05D008361 4.3e-25 117.5 72 77.8
Phvul.007G158300 Phaseolus vulgaris HOM05D006941 ORTHO05D008361 4.3e-25 117.5 72 76.4
Eucgr.H03704 Eucalyptus grandis HOM05D006941 ORTHO05D008361 5.7e-25 117.1 72 75.0
FAN22G2172 Fragaria x ananassa HOM05D006941 ORTHO05D008361 5.7e-25 117.1 72 77.8
Lalb_Chr14g0364951 Lupinus albus HOM05D006941 ORTHO05D008361 5.7e-25 117.1 72 77.8
C08p37290 Brassica napus HOM05D006941 ORTHO05D008361 7.4e-25 116.7 68 80.9
BolC8t51307H Brassica oleracea HOM05D006941 ORTHO05D008361 7.4e-25 116.7 68 80.9
Migut.G00223 Erythranthe guttata HOM05D006941 ORTHO05D008361 7.4e-25 116.7 73 79.5
Thecc.04G275300 Theobroma cacao HOM05D006941 ORTHO05D008361 1.3e-24 115.9 72 75.0
Atru.chr4.2738 Acer truncatum HOM05D006941 ORTHO05D008361 1.6e-24 115.5 72 76.4
QL06p006942 Quercus lobata HOM05D006941 ORTHO05D008361 1.6e-24 115.5 71 74.6
Rhsim02G0014500 Rhododendron simsii HOM05D006941 ORTHO05D008361 1.6e-24 115.5 72 76.4
BcaC07g42761 Brassica carinata HOM05D006941 ORTHO05D008361 2.1e-24 115.2 68 79.4
Ca_09608_v3 Cicer arietinum L. HOM05D006941 ORTHO05D008361 2.1e-24 115.2 72 73.6
ECA233G1626 Erigeron canadensis HOM05D006941 ORTHO05D008361 2.1e-24 115.2 72 76.4
Thhalv10006352m.g Eutrema salsugineum HOM05D006941 ORTHO05D008361 2.1e-24 115.2 68 79.4
Manes.14G117300 Manihot esculenta HOM05D006941 ORTHO05D008361 2.1e-24 115.2 72 76.4
Psat6g067840 Pisum sativum HOM05D006941 ORTHO05D008361 2.1e-24 115.2 72 73.6
Carub.0005s2918 Capsella rubella HOM05D006941 ORTHO05D008361 3.7e-24 114.4 68 76.5
Duzib151G0434 Durio zibethinus HOM05D006941 ORTHO05D008361 3.7e-24 114.4 70 75.7
Phvul.010G109000 Phaseolus vulgaris HOM05D006941 ORTHO05D008361 3.7e-24 114.4 72 75.0
Phvul.L002281 Phaseolus vulgaris HOM05D006941 ORTHO05D008361 3.7e-24 114.4 72 75.0
Potri.005G071700 Populus trichocarpa HOM05D006941 ORTHO05D008361 6.2e-24 113.6 72 72.2
Sp5g00970 Schrenkiella parvula HOM05D006941 ORTHO05D008361 6.2e-24 113.6 68 77.9
Glyma.10G044600 Glycine max HOM05D006941 ORTHO05D008361 8.2e-24 113.2 72 73.6
Glyma.13G132200 Glycine max HOM05D006941 ORTHO05D008361 8.2e-24 113.2 72 73.6
TWI09G0325 Tripterygium wilfordii HOM05D006941 ORTHO05D008361 1.1e-23 112.8 72 72.2
Lalb_Chr22g0358511 Lupinus albus HOM05D006941 ORTHO05D008361 1.8e-23 112.1 72 72.2
TWI53G0190 Tripterygium wilfordii HOM05D006941 ORTHO05D008361 2.4e-23 111.7 71 71.8
A09p54410 Brassica napus HOM05D006941 ORTHO05D008361 3.1e-23 111.3 68 75.0
BraA09t40854Z Brassica rapa HOM05D006941 ORTHO05D008361 3.1e-23 111.3 68 75.0
DCAR_030574 Daucus carota HOM05D006941 ORTHO05D008361 3.1e-23 111.3 72 72.2
vmacro15274 Vaccinium macrocarpon HOM05D006941 ORTHO05D008361 3.1e-23 111.3 75 73.3
arahy.Tifrunner.gnm1.ann1.UB09PE Arachis hypogaea HOM05D006941 ORTHO05D008361 6.9e-23 110.2 71 77.5
AT3G62450 Arabidopsis thaliana HOM05D006941 ORTHO05D008361 9.0e-23 109.8 68 73.5
CANSAT78G0092 Cannabis sativa HOM05D006941 ORTHO05D008361 9.0e-23 109.8 72 70.8
arahy.Tifrunner.gnm1.ann1.DDI179 Arachis hypogaea HOM05D006941 ORTHO05D008361 1.2e-22 109.4 85 68.2
AL5G45260 Arabidopsis lyrata HOM05D006941 ORTHO05D008361 1.5e-22 109.0 68 73.5
Sed0004518 Sechium edule HOM05D006941 ORTHO05D008361 2.0e-22 108.6 73 74.0
THA.LOC104820449 Tarenaya hassleriana HOM05D006941 ORTHO05D008361 2.0e-22 108.6 71 70.4
Medtr1g068580 Medicago truncatula HOM05D006941 ORTHO05D008361 3.4e-22 107.8 65 73.8
unitig_22.g6332 Utricularia gibba HOM05D006941 ORTHO05D008361 4.5e-22 107.5 66 74.2
Aa31LG10G16360 Aethionema arabicum HOM05D006941 ORTHO05D008361 1.3e-21 105.9 65 73.8
Sabra07G0080600 Salix brachista HOM05D006941 ORTHO05D008361 1.7e-21 105.5 82 64.6
PSO302G0016 Papaver somniferum HOM05D006941 ORTHO05D008361 2.2e-21 105.1 69 69.6
Medtr2g005070 Medicago truncatula HOM05D006941 ORTHO05D008361 2.9e-21 104.8 64 73.4
BcaB02g07336 Brassica carinata HOM05D006941 ORTHO05D008361 3.8e-21 104.4 61 82.0
Lj4g0022805 Lotus japonicus HOM05D006941 ORTHO05D008361 5.5e-20 100.5 72 70.8
Os11g0107450 Oryza sativa ssp. japonica HOM05D006941 ORTHO05D008361 5.5e-20 100.5 67 73.1
Hund22020 Selenicereus undatus HOM05D006941 ORTHO05D008361 7.1e-20 100.1 70 68.6
PGSC0003DMG400029912 Solanum tuberosum HOM05D006941 ORTHO05D008361 7.1e-20 100.1 51 94.1
Zm00001eb163280 Zea mays HOM05D006941 ORTHO05D008361 9.3e-20 99.8 70 68.6
Zm00001eb094170 Zea mays HOM05D006941 ORTHO05D008361 2.1e-19 98.6 70 67.1
SGA_v2.0_scaffold57G20266 Striga asiatica HOM05D006941 ORTHO05D008361 4.6e-19 97.4 101 54.5
ClCG06G005480 Citrullus lanatus HOM05D006941 ORTHO05D008361 6.1e-19 97.1 88 59.1
Os12g0106550 Oryza sativa ssp. japonica HOM05D006941 ORTHO05D008361 1.3e-18 95.9 69 66.7
SHI00325 Sapria himalayana HOM05D006941 ORTHO05D008361 3.9e-18 94.4 72 63.9
SEGI_10041 Sequoiadendron giganteum HOM05D006941 ORTHO05D008361 8.7e-18 93.2 70 62.9
Haze_01039 Corylus avellana HOM05D006941 ORTHO05D008361 3.3e-17 91.3 72 63.9
HanXRQChr15g0466771 Helianthus annuus HOM05D006941 ORTHO05D008361 7.4e-17 90.1 137 41.6
MD16G1176900 Malus domestica HOM05D006941 ORTHO05D008361 9.7e-17 89.7 52 80.8
CDE02G1545 Ceratophyllum demersum HOM05D006941 ORTHO05D008361 2.2e-16 88.6 61 63.9
VMungo0464G0431 Vigna mungo HOM05D006941 ORTHO05D008361 2.2e-16 88.6 131 41.2
Cfa015511 Carpinus fangiana HOM05D006941 ORTHO05D008361 1.1e-15 86.3 70 60.0
RcHm_v2.0_Chr1g0363231 Rosa chinensis HOM05D006941 ORTHO05D008361 2.6e-14 81.6 50 78.0
BcaC07g40728 Brassica carinata HOM05D006941 ORTHO05D008361 2.1e-11 72.0 68 55.9
Eucgr.H03709 Eucalyptus grandis HOM05D006941 ORTHO05D008361 3.6e-11 71.2 42 76.2
COL.COLO4_13955 Corchorus olitorius HOM05D006941 ORTHO05D008361 6.1e-11 70.5 41 78.0
Ciclev10006724m.g Citrus clementina HOM05D006941 ORTHO05D008361 1.4e-10 69.3 42 71.4
vmacro16859 Vaccinium macrocarpon HOM05D000537 ORTHO05D000415 3.0e-10 68.2 39 76.9
VMungo0720G2266 Vigna mungo HOM05D006941 ORTHO05D008361 5.1e-10 67.4 42 73.8
SGA_v2.0_scaffold114G31931 Striga asiatica HOM05D006941 ORTHO05D008361 8.8e-10 66.6 51 62.7
Sc19g0004830 Simmondsia chinensis HOM05D006941 ORTHO05D008361 1.1e-09 66.2 42 69.0
Lsat_1_v5_gn_2_28060 Lactuca sativa HOM05D006941 ORTHO05D008361 1.5e-09 65.9 41 73.2
Atru.chr2.2418 Acer truncatum HOM05D006941 ORTHO05D008361 7.4e-09 63.5 42 71.4
Actinidia00061 Actinidia chinensis HOM05D006941 ORTHO05D008361 1.3e-08 62.8 30 93.3
Dinv16400 Davidia involucrata HOM05D006941 ORTHO05D008361 1.3e-08 62.8 35 80.0
Sabra05G0058700 Salix brachista HOM05D006941 ORTHO05D008361 2.2e-08 62.0 166 28.9
MSTRG.24772 Avicennia marina HOM05D006941 ORTHO05D008361 3.7e-08 61.2 42 64.3
Medtr2g048470 Medicago truncatula HOM05D006941 ORTHO05D008361 6.3e-08 60.5 36 72.2
Eucgr.H03675 Eucalyptus grandis HOM05D006941 ORTHO05D008361 1.1e-07 59.7 39 64.1
Oeu048197.1 Olea europaea HOM05D010625 ORTHO05D008361 1.1e-07 59.7 41 68.3
AagrBONN_evm.TU.Sc2ySwM_344.628 Anthoceros agrestis HOM05D006941 ORTHO05D008361 3.1e-07 58.2 45 60.0
HanXRQChr10g0285751 Helianthus annuus HOM05D006941 ORTHO05D008361 1.5e-06 55.8 31 80.6
Eucgr.H03674 Eucalyptus grandis HOM05D025724 ORTHO05D008361 2.6e-06 55.1 35 71.4
Pp3c4_20400 Physcomitrium patens HOM05D006941 ORTHO05D008361 3.4e-06 54.7 40 60.0
Mapoly0142s0032 Marchantia polymorpha HOM05D006941 ORTHO05D008361 4.5e-06 54.3 53 54.7


User provided reference genes

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