Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen01g029630 Solanum pennellii HOM05D007369 ORTHO05D009369 4.3e-245 850.9 429 100.0
CAN.G223.8 Capsicum annuum HOM05D007369 ORTHO05D009369 2.4e-208 728.8 430 85.1
Solyc01g067700.3 Solanum lycopersicum HOM05D007369 ORTHO05D009369 1.2e-191 673.3 346 98.3
Nitab4.5_0003067g0040 Nicotiana tabacum HOM05D007369 ORTHO05D009369 9.1e-163 577.4 411 73.7
Nitab4.5_0000197g0120 Nicotiana tabacum HOM05D007369 ORTHO05D009369 1.7e-140 503.4 408 68.1
Peaxi162Scf00386g00219 Petunia axillaris HOM05D007369 ORTHO05D009369 5.8e-133 478.4 334 74.3
Dinv38329 Davidia involucrata HOM05D007369 ORTHO05D009369 1.3e-89 334.3 434 47.5
Hma1.2p1_0078F.1_g040800 Hydrangea macrophylla HOM05D007369 ORTHO05D009369 3.1e-78 296.6 432 42.8
CSS0015973 Camellia sinensis var. sinensis HOM05D007369 ORTHO05D009369 1.4e-75 287.7 436 44.0
QL06p007318 Quercus lobata HOM05D007369 ORTHO05D009369 2.0e-69 267.3 436 41.5
Thecc.04G277200 Theobroma cacao HOM05D007369 ORTHO05D009369 3.4e-69 266.5 431 41.1
Actinidia40222 Actinidia chinensis HOM05D007369 ORTHO05D009369 2.2e-68 263.8 405 43.0
TAR636G2558 Trochodendron aralioides HOM05D007369 ORTHO05D009369 3.2e-67 260.0 442 40.3
Cfa015498 Carpinus fangiana HOM05D007369 ORTHO05D009369 4.2e-67 259.6 436 39.2
Cc03_g02400 Coffea canephora HOM05D007369 ORTHO05D009369 4.2e-67 259.6 423 44.2
Rhsim04G0215900 Rhododendron simsii HOM05D007369 ORTHO05D009369 6.1e-66 255.8 440 39.5
Oeu044796.2 Olea europaea HOM05D007369 ORTHO05D009369 1.8e-65 254.2 433 42.3
Ciclev10005057m.g Citrus clementina HOM05D007369 ORTHO05D009369 3.0e-65 253.4 427 40.7
Actinidia23432 Actinidia chinensis HOM05D007369 ORTHO05D009369 1.5e-64 251.1 423 41.4
GSVIVG01017812001 Vitis vinifera HOM05D007369 ORTHO05D009369 3.3e-64 250.0 414 41.1
CiPaw.02G086900 Carya illinoinensis HOM05D007369 ORTHO05D009369 5.7e-64 249.2 432 40.0
Potri.008G195300 Populus trichocarpa HOM05D007369 ORTHO05D009369 2.8e-63 246.9 429 38.7
Prupe.1G142600 Prunus persica HOM05D007369 ORTHO05D009369 2.8e-63 246.9 438 38.6
MD13G1174200 Malus domestica HOM05D007369 ORTHO05D009369 1.2e-61 241.5 427 38.6
Duzib052G0382 Durio zibethinus HOM05D007369 ORTHO05D009369 5.9e-61 239.2 426 39.0
Gohir.D09G060700 Gossypium hirsutum HOM05D007369 ORTHO05D009369 1.3e-60 238.0 419 38.4
Manes.03G190800 Manihot esculenta HOM05D007369 ORTHO05D009369 8.5e-60 235.3 361 41.8
Manes.15G017400 Manihot esculenta HOM05D007369 ORTHO05D009369 1.1e-59 235.0 419 38.2
Nn3g21294 Nelumbo nucifera HOM05D007369 ORTHO05D009369 2.5e-59 233.8 435 36.3
Gorai.006G075300 Gossypium raimondii HOM05D007369 ORTHO05D009369 9.4e-59 231.9 432 37.3
SalBow2G2600 Salvia bowleyana HOM05D007369 ORTHO05D009369 1.0e-57 228.4 432 38.9
Gohir.A09G061800 Gossypium hirsutum HOM05D007369 ORTHO05D009369 1.5e-56 224.6 423 36.9
CANSAT78G0356 Cannabis sativa HOM05D007369 ORTHO05D009369 3.8e-52 209.9 434 35.5
Oeu062882.1 Olea europaea HOM05D007369 ORTHO05D009369 3.2e-51 206.8 348 42.2
Dinv44429 Davidia involucrata HOM05D007369 ORTHO05D009369 9.4e-51 205.3 342 40.9
Aqoxy2G03087 Aquilegia oxysepala HOM05D007369 ORTHO05D009369 1.2e-50 204.9 433 33.7
MBI19_g37517_MAGBIO Magnolia biondii HOM05D007369 ORTHO05D009369 1.4e-49 201.4 444 36.5
DCAR_002440 Daucus carota HOM05D007369 ORTHO05D009369 2.0e-48 197.6 315 41.0
Haze_01056 Corylus avellana HOM05D007369 ORTHO05D009369 2.6e-48 197.2 481 32.6
COL.COLO4_13933 Corchorus olitorius HOM05D007369 ORTHO05D009369 2.2e-47 194.1 494 32.2
TPR.G37368 Trifolium pratense HOM05D007369 ORTHO05D009369 4.8e-47 193.0 431 34.1
Duzib151G0340 Durio zibethinus HOM05D007369 ORTHO05D009369 6.3e-47 192.6 429 34.0
Nn4g26033 Nelumbo nucifera HOM05D007369 ORTHO05D009369 6.3e-47 192.6 433 33.7
Phvul.006G161000 Phaseolus vulgaris HOM05D007369 ORTHO05D009369 8.2e-47 192.2 427 31.4
RcHm_v2.0_Chr4g0420931 Rosa chinensis HOM05D007369 ORTHO05D009369 1.1e-46 191.8 423 34.5
VMungo0540G1702 Vigna mungo HOM05D007369 ORTHO05D009369 2.4e-46 190.7 437 31.1
Glyma.13G214800 Glycine max HOM05D007369 ORTHO05D009369 7.0e-46 189.1 433 32.6
ATR0706G035 Amborella trichopoda HOM05D007369 ORTHO05D009369 1.2e-45 188.3 444 35.8
FAN07G2486 Fragaria x ananassa HOM05D007369 ORTHO05D009369 2.0e-45 187.6 420 35.0
vmacro08206 Vaccinium macrocarpon HOM05D007369 ORTHO05D009369 3.5e-45 186.8 451 32.8
Sed0026345 Sechium edule HOM05D007369 ORTHO05D009369 1.0e-44 185.3 403 35.2
FvH4_4g17160 Fragaria vesca HOM05D007369 ORTHO05D009369 1.3e-44 184.9 424 35.1
FAN12G1425 Fragaria x ananassa HOM05D007369 ORTHO05D009369 1.3e-44 184.9 424 35.1
FAN12G3176 Fragaria x ananassa HOM05D007369 ORTHO05D009369 1.9e-43 181.0 424 34.9
Potri.010G031250 Populus trichocarpa HOM05D007369 ORTHO05D009369 7.2e-43 179.1 196 51.5
Glyma.15G098300 Glycine max HOM05D007369 ORTHO05D009369 9.4e-43 178.7 430 32.8
SGA_v2.0_scaffold57G20253 Striga asiatica HOM05D007369 ORTHO05D009369 1.6e-42 177.9 427 33.3
Eucgr.B01264 Eucalyptus grandis HOM05D007369 ORTHO05D009369 2.7e-42 177.2 425 33.9
Migut.G00214 Erythranthe guttata HOM05D007369 ORTHO05D009369 3.6e-42 176.8 170 54.7
FAN17G0929 Fragaria x ananassa HOM05D007369 ORTHO05D009369 4.7e-42 176.4 422 34.4
CsaV3_3G014100 Cucumis sativus L. HOM05D007369 ORTHO05D009369 4.0e-41 173.3 405 33.6
Psat1g187040 Pisum sativum HOM05D007369 ORTHO05D009369 5.7e-40 169.5 486 30.5
Lalb_Chr18g0055751 Lupinus albus HOM05D007369 ORTHO05D009369 1.3e-39 168.3 432 31.0
TWI73G1273 Tripterygium wilfordii HOM05D007369 ORTHO05D009369 1.7e-39 167.9 230 43.9
Medtr8g093650 Medicago truncatula HOM05D007369 ORTHO05D009369 3.7e-39 166.8 473 29.6
ECA240G2128 Erigeron canadensis HOM05D007369 ORTHO05D009369 1.1e-38 165.2 406 34.7
ClCG05G005770 Citrullus lanatus HOM05D007369 ORTHO05D009369 2.4e-38 164.1 396 33.1
Ca_00577_v3 Cicer arietinum L. HOM05D007369 ORTHO05D009369 3.1e-38 163.7 321 33.6
Sabra08G0148500 Salix brachista HOM05D007369 ORTHO05D009369 5.9e-37 159.5 180 47.2
HanXRQChr03g0080111 Helianthus annuus HOM05D007369 ORTHO05D009369 1.3e-36 158.3 308 36.7
arahy.Tifrunner.gnm1.ann1.ED76E0 Arachis hypogaea HOM05D007369 ORTHO05D009369 1.7e-36 157.9 402 32.3
arahy.Tifrunner.gnm1.ann1.IR05CW Arachis hypogaea HOM05D007369 ORTHO05D009369 1.5e-35 154.8 415 31.3
FAN17G3125 Fragaria x ananassa HOM05D007369 ORTHO05D009369 2.0e-32 144.4 129 56.6
Mapoly0126s0031 Marchantia polymorpha HOM05D007369 ORTHO05D009369 4.9e-31 139.8 341 32.0
THA.LOC104820236 Tarenaya hassleriana HOM05D007369 ORTHO05D009369 6.3e-31 139.4 309 32.0
Ca_17638_v3 Cicer arietinum L. HOM05D007369 ORTHO05D009369 1.8e-30 137.9 493 27.6
MD16G1175700 Malus domestica HOM05D007369 ORTHO05D009369 1.8e-30 137.9 93 67.7
FAN22G0049 Fragaria x ananassa HOM05D007369 ORTHO05D009369 3.1e-30 137.1 423 31.2
Solyc01g067690.4 Solanum lycopersicum HOM05D007369 ORTHO05D051100 9.1e-30 135.6 67 97.0
MELO3C031713.2 Cucumis melo HOM05D007369 ORTHO05D009369 1.2e-29 135.2 422 31.5
PGSC0003DMG402010654 Solanum tuberosum HOM05D007369 ORTHO05D009369 1.9e-27 127.9 62 98.4
Atru.chr4.2749 Acer truncatum HOM05D007369 ORTHO05D009369 1.6e-26 124.8 134 50.0
Sc13g0003630 Simmondsia chinensis HOM05D007369 ORTHO05D009369 4.7e-26 123.2 353 30.3
LjContig00389g0017607 Lotus japonicus HOM05D007369 ORTHO05D009369 3.2e-22 110.5 363 27.3
Zm00001eb410560 Zea mays HOM05D007369 ORTHO05D009369 8.6e-20 102.4 154 37.0
Atru.chr4.2750 Acer truncatum HOM05D007369 ORTHO05D009369 3.3e-19 100.5 164 40.9
PGSC0003DMG403010654 Solanum tuberosum HOM05D007369 ORTHO05D051100 4.7e-18 96.7 50 88.0
AagrBONN_evm.TU.Sc2ySwM_362.2687 Anthoceros agrestis HOM05D007369 ORTHO05D009369 1.8e-17 94.7 132 44.7
TAR365G0645 Trochodendron aralioides HOM05D007369 ORTHO05D009369 3.1e-17 94.0 256 32.4
Lsat_1_v5_gn_5_50560 Lactuca sativa HOM05D007369 ORTHO05D009369 8.3e-15 85.9 148 41.9
Hund24911 Selenicereus undatus HOM05D007369 ORTHO05D009369 1.1e-14 85.5 430 25.8
PGSC0003DMG401010654 Solanum tuberosum HOM05D007369 ORTHO05D009369 1.1e-14 85.5 51 86.3
MD16G1175500 Malus domestica HOM05D007369 ORTHO05D009369 1.9e-11 74.7 244 29.5
Mapoly0008s0171 Marchantia polymorpha HOM05D007369 ORTHO05D009369 2.0e-08 64.7 106 35.8


User provided reference genes

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