Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen01g029530 Solanum pennellii HOM05D006881 ORTHO05D008423 1.7e-66 256.1 155 100.0
Solyc01g067580.4 Solanum lycopersicum HOM05D006881 ORTHO05D008423 1.5e-62 243.0 155 96.8
PGSC0003DMG400010658 Solanum tuberosum HOM05D006881 ORTHO05D008423 1.5e-59 233.0 155 92.9
CAN.G223.19 Capsicum annuum HOM05D006881 ORTHO05D008423 1.5e-51 206.5 120 90.0
Nitab4.5_0013689g0020 Nicotiana tabacum HOM05D006881 ORTHO05D008423 1.4e-41 173.3 155 73.5
Peaxi162Scf00386g00414 Petunia axillaris HOM05D006881 ORTHO05D008423 2.1e-40 169.5 108 83.3
Cc03_g02070 Coffea canephora HOM05D006881 ORTHO05D008423 3.0e-39 165.6 153 72.5
vmacro15245 Vaccinium macrocarpon HOM05D006881 ORTHO05D008423 1.9e-38 162.9 155 61.9
MSTRG.10082 Avicennia marina HOM05D006881 ORTHO05D008423 2.5e-38 162.5 157 66.2
Aa31LG11G11080 Aethionema arabicum HOM05D006881 ORTHO05D008423 3.3e-38 162.2 159 63.5
Sabra08G0154800 Salix brachista HOM05D006881 ORTHO05D008423 3.3e-38 162.2 156 67.9
Migut.G00182 Erythranthe guttata HOM05D006881 ORTHO05D008423 1.6e-37 159.8 155 67.7
Oeu021111.1 Olea europaea HOM05D006881 ORTHO05D008423 3.6e-37 158.7 162 66.7
Ciclev10005896m.g Citrus clementina HOM05D006881 ORTHO05D008423 8.1e-37 157.5 160 66.2
Duzib212G0198 Durio zibethinus HOM05D006881 ORTHO05D008423 1.4e-36 156.8 118 68.6
Thecc.04G282000 Theobroma cacao HOM05D006881 ORTHO05D008423 1.8e-36 156.4 118 68.6
CSS0009612 Camellia sinensis var. sinensis HOM05D006881 ORTHO05D008423 3.1e-36 155.6 158 65.2
SGA_v2.0_scaffold86G26903 Striga asiatica HOM05D006881 ORTHO05D008423 3.1e-36 155.6 159 63.5
Actinidia00041 Actinidia chinensis HOM05D006881 ORTHO05D008423 4.0e-36 155.2 160 57.5
Dinv38306 Davidia involucrata HOM05D006881 ORTHO05D008423 4.0e-36 155.2 103 75.7
CARHR194480 Cardamine hirsuta HOM05D006881 ORTHO05D008423 1.5e-35 153.3 160 64.4
BcaB05g23335 Brassica carinata HOM05D006881 ORTHO05D008423 2.0e-35 152.9 161 65.2
AL6G29810 Arabidopsis lyrata HOM05D006881 ORTHO05D008423 3.4e-35 152.1 160 64.4
BcaC03g13606 Brassica carinata HOM05D006881 ORTHO05D008423 4.5e-35 151.8 161 65.2
C02p10000 Brassica napus HOM05D006881 ORTHO05D008423 4.5e-35 151.8 161 65.2
Thhalv10014829m.g Eutrema salsugineum HOM05D006881 ORTHO05D008423 4.5e-35 151.8 161 63.4
MBI19_g24002_MAGBIO Magnolia biondii HOM05D006881 ORTHO05D008423 4.5e-35 151.8 110 74.5
CSS0005297 Camellia sinensis var. sinensis HOM05D006881 ORTHO05D008423 7.6e-35 151.0 159 64.8
Carub.0006s1681 Capsella rubella HOM05D006881 ORTHO05D008423 9.9e-35 150.6 160 65.6
A02p04970 Brassica napus HOM05D006881 ORTHO05D008423 1.3e-34 150.2 109 74.3
Potri.008G216700 Populus trichocarpa HOM05D006881 ORTHO05D008423 1.3e-34 150.2 155 63.2
GSVIVG01017769001 Vitis vinifera HOM05D006881 ORTHO05D008423 1.3e-34 150.2 157 63.7
AT5G18540 Arabidopsis thaliana HOM05D006881 ORTHO05D008423 1.7e-34 149.8 162 61.7
SalBow2G0124 Salvia bowleyana HOM05D006881 ORTHO05D008423 1.7e-34 149.8 157 64.3
Sp6g25790 Schrenkiella parvula HOM05D006881 ORTHO05D008423 1.7e-34 149.8 160 64.4
Gohir.A02G048200 Gossypium hirsutum HOM05D006881 ORTHO05D008423 2.9e-34 149.1 157 66.2
Manes.03G192600 Manihot esculenta HOM05D006881 ORTHO05D008423 2.9e-34 149.1 150 67.3
TAR636G2672 Trochodendron aralioides HOM05D006881 ORTHO05D008423 2.9e-34 149.1 105 70.5
DCAR_024558 Daucus carota HOM05D006881 ORTHO05D008423 3.8e-34 148.7 121 68.6
Gorai.005G059100 Gossypium raimondii HOM05D006881 ORTHO05D008423 4.9e-34 148.3 117 69.2
arahy.Tifrunner.gnm1.ann1.E8HU74 Arachis hypogaea HOM05D006881 ORTHO05D008423 6.4e-34 147.9 104 73.1
Gohir.D02G053300 Gossypium hirsutum HOM05D006881 ORTHO05D008423 6.4e-34 147.9 157 65.6
HanXRQChr17g0536111 Helianthus annuus HOM05D006881 ORTHO05D008423 6.4e-34 147.9 105 72.4
QL06p008283 Quercus lobata HOM05D006881 ORTHO05D008423 6.4e-34 147.9 110 70.0
CiPaw.01G150600 Carya illinoinensis HOM05D006881 ORTHO05D008423 1.1e-33 147.1 163 58.9
THA.LOC104818851 Tarenaya hassleriana HOM05D006881 ORTHO05D008423 1.4e-33 146.7 118 66.1
Cpa.g.sc16.153 Carica papaya HOM05D006881 ORTHO05D008423 1.9e-33 146.4 106 69.8
SalBow2G2956 Salvia bowleyana HOM05D006881 ORTHO05D008423 1.9e-33 146.4 120 64.2
unitig_748.g8741 Utricularia gibba HOM05D006881 ORTHO05D008423 1.9e-33 146.4 119 66.4
BraA02t05456Z Brassica rapa HOM05D006881 ORTHO05D008423 2.4e-33 146.0 108 73.1
Lsat_1_v5_gn_3_24181 Lactuca sativa HOM05D006881 ORTHO05D008423 4.2e-33 145.2 111 68.5
PSO210G1559 Papaver somniferum HOM05D006881 ORTHO05D008423 4.2e-33 145.2 119 64.7
Psat1g151960 Pisum sativum HOM05D006881 ORTHO05D008423 5.4e-33 144.8 148 61.5
TPR.G23710 Trifolium pratense HOM05D006881 ORTHO05D008423 5.4e-33 144.8 108 65.7
Lalb_Chr18g0051811 Lupinus albus HOM05D006881 ORTHO05D008423 7.1e-33 144.4 111 66.7
EL10Ac3g06585 Beta vulgaris HOM05D006881 ORTHO05D008423 9.3e-33 144.1 120 64.2
Prupe.1G139200 Prunus persica HOM05D006881 ORTHO05D008423 9.3e-33 144.1 154 65.6
Sed0007304 Sechium edule HOM05D006881 ORTHO05D008423 1.2e-32 143.7 157 63.7
ClCG05G005980 Citrullus lanatus HOM05D006881 ORTHO05D008423 2.1e-32 142.9 121 62.8
Phvul.009G245900 Phaseolus vulgaris HOM05D006881 ORTHO05D008423 3.5e-32 142.1 157 62.4
Ca_02413_v3 Cicer arietinum L. HOM05D002802 ORTHO05D003166 7.9e-32 141.0 109 64.2
ECA246G4172 Erigeron canadensis HOM05D006881 ORTHO05D008423 1.0e-31 140.6 115 67.8
PSO170G5464 Papaver somniferum HOM05D006881 ORTHO05D008423 1.0e-31 140.6 155 52.9
Atru.chr4.2800 Acer truncatum HOM05D006881 ORTHO05D008423 1.8e-31 139.8 158 65.2
CsaV3_3G014430 Cucumis sativus L. HOM05D006881 ORTHO05D008423 2.3e-31 139.4 158 62.7
MD13G1170800 Malus domestica HOM05D006881 ORTHO05D008423 3.0e-31 139.0 121 64.5
CANSAT78G0809 Cannabis sativa HOM05D006881 ORTHO05D008423 8.7e-31 137.5 115 67.8
Glyma.09G046900 Glycine max HOM05D006881 ORTHO05D008423 1.9e-30 136.3 103 68.0
Zm00001eb330210 Zea mays HOM05D006881 ORTHO05D008423 1.9e-30 136.3 112 66.1
BolC2t06902H Brassica oleracea HOM05D006881 ORTHO05D008423 2.5e-30 136.0 102 73.5
VMungo1309G2079 Vigna mungo HOM05D006881 ORTHO05D008423 2.5e-30 136.0 103 67.0
arahy.Tifrunner.gnm1.ann1.NXX1KJ Arachis hypogaea HOM05D006881 ORTHO05D008423 9.6e-30 134.0 123 61.0
FAN12G2996 Fragaria x ananassa HOM05D006881 ORTHO05D008423 1.3e-29 133.7 121 63.6
PGR031G0133 Punica granatum HOM05D006881 ORTHO05D008423 1.3e-29 133.7 168 59.5
Eucgr.B01283 Eucalyptus grandis HOM05D006881 ORTHO05D008423 1.6e-29 133.3 103 68.0
FAN07G1171 Fragaria x ananassa HOM05D006881 ORTHO05D008423 1.6e-29 133.3 121 63.6
A10p21020 Brassica napus HOM05D006881 ORTHO05D008423 2.8e-29 132.5 165 59.4
FvH4_4g17670 Fragaria vesca HOM05D006881 ORTHO05D008423 2.8e-29 132.5 112 66.1
FAN12G2006 Fragaria x ananassa HOM05D006881 ORTHO05D008423 2.8e-29 132.5 112 66.1
FAN17G1543 Fragaria x ananassa HOM05D006881 ORTHO05D008423 2.8e-29 132.5 123 62.6
Os07g0669600 Oryza sativa ssp. japonica HOM05D006881 ORTHO05D008423 2.8e-29 132.5 103 67.0
Glyma.15G154400 Glycine max HOM05D006881 ORTHO05D008423 3.7e-29 132.1 103 67.0
RcHm_v2.0_Chr4g0421611 Rosa chinensis HOM05D006881 ORTHO05D008423 4.8e-29 131.7 155 61.3
MELO3C006643.2 Cucumis melo HOM05D006881 ORTHO05D008423 1.1e-28 130.6 154 60.4
TWI09G1277 Tripterygium wilfordii HOM05D006881 ORTHO05D008423 1.1e-28 130.6 158 60.8
Lj6g0021421 Lotus japonicus HOM05D006881 ORTHO05D008423 1.8e-28 129.8 103 64.1
HPP92_025226 Vanilla planifolia HOM05D006881 ORTHO05D008423 1.8e-28 129.8 159 50.9
Aqoxy2G03052 Aquilegia oxysepala HOM05D006881 ORTHO05D008423 2.4e-28 129.4 120 62.5
Hund20570 Selenicereus undatus HOM05D006881 ORTHO05D008423 5.3e-28 128.3 122 58.2
HPP92_025214 Vanilla planifolia HOM05D006881 ORTHO05D008423 6.9e-28 127.9 158 50.6
Medtr2g437470 Medicago truncatula HOM05D006881 ORTHO05D008423 2.9e-26 122.5 105 59.0
BraA10t44166Z Brassica rapa HOM05D006881 ORTHO05D008423 6.5e-26 121.3 167 56.9
Rhsim02G0011900 Rhododendron simsii HOM05D006881 ORTHO05D008423 6.5e-26 121.3 84 73.8
CDE09G1155 Ceratophyllum demersum HOM05D006881 ORTHO05D008423 1.4e-25 120.2 118 58.5
Hma1.2p1_0698F.1_g205340 Hydrangea macrophylla HOM05D006881 ORTHO05D008423 1.2e-24 117.1 152 57.2
ATR0706G047 Amborella trichopoda HOM05D006881 ORTHO05D008423 1.6e-24 116.7 120 51.7
Sc19g0005040 Simmondsia chinensis HOM05D006881 ORTHO05D008423 1.6e-24 116.7 140 50.7
Nn3g21363 Nelumbo nucifera HOM05D006881 ORTHO05D008423 2.1e-24 116.3 81 70.4
SMO367G0816 Selaginella moellendorffii HOM05D006881 ORTHO05D008423 3.9e-23 112.1 107 58.9
CSS0034417 Camellia sinensis var. sinensis HOM05D006881 ORTHO05D008423 8.7e-23 110.9 87 65.5
SEGI_11441 Sequoiadendron giganteum HOM05D006881 ORTHO05D008423 4.3e-22 108.6 111 53.2
SHI00284 Sapria himalayana HOM05D006881 ORTHO05D008423 1.3e-21 107.1 85 63.5
Ah.13g074590 Amaranthus hybridus HOM05D006881 ORTHO05D008423 1.6e-21 106.7 140 49.3
TWI73G0635 Tripterygium wilfordii HOM05D006881 ORTHO05D008423 8.2e-21 104.4 102 56.9
CSS0015929 Camellia sinensis var. sinensis HOM05D006881 ORTHO05D008423 1.4e-20 103.6 168 51.2
Pp3c15_10020 Physcomitrium patens HOM05D006881 ORTHO05D008423 9.0e-20 100.9 134 47.0
Nitab4.5_0000784g0080 Nicotiana tabacum HOM05D006881 ORTHO05D008423 1.5e-19 100.1 160 57.5
Mapoly0010s0048 Marchantia polymorpha HOM05D006881 ORTHO05D008423 7.6e-19 97.8 109 48.6
Haze_01236 Corylus avellana HOM05D006881 ORTHO05D008423 2.5e-17 92.8 81 60.5
BcaB08g36664 Brassica carinata HOM05D006881 ORTHO05D008423 1.2e-16 90.5 157 51.0
BcaC04g18670 Brassica carinata HOM05D006881 ORTHO05D008423 2.1e-16 89.7 63 74.6
AagrBONN_evm.TU.Sc2ySwM_228.1971 Anthoceros agrestis HOM05D006881 ORTHO05D008423 1.9e-14 83.2 103 48.5
AUR62040384 Chenopodium quinoa HOM05D006881 ORTHO05D008423 3.3e-14 82.4 54 74.1
CDE02G3907 Ceratophyllum demersum HOM05D006881 ORTHO05D008423 1.6e-13 80.1 76 60.5
CSS0002463 Camellia sinensis var. sinensis HOM05D006881 ORTHO05D008423 2.8e-13 79.3 103 48.5
CBR_g46646 Chara braunii HOM05D006881 ORTHO05D008423 9.0e-12 74.3 92 46.7
C09p57950 Brassica napus HOM05D006881 ORTHO05D008423 1.5e-11 73.6 50 68.0
BolC9t58662H Brassica oleracea HOM05D006881 ORTHO05D008423 1.5e-11 73.6 50 68.0


User provided reference genes

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