Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen01g029220 Solanum pennellii HOM05D008610 ORTHO05D010832 8.0e-115 417.2 217 100.0
Solyc01g067340.3 Solanum lycopersicum HOM05D008610 ORTHO05D010832 1.8e-95 352.8 185 98.9
CAN.G556.6 Capsicum annuum HOM05D008610 ORTHO05D010832 5.8e-73 278.1 191 80.6
Nitab4.5_0000829g0060 Nicotiana tabacum HOM05D008610 ORTHO05D010832 2.3e-61 239.6 193 70.5
Peaxi162Scf00386g00922 Petunia axillaris HOM05D008610 ORTHO05D010832 7.3e-60 234.6 190 72.1
Nitab4.5_0002986g0040 Nicotiana tabacum HOM05D008610 ORTHO05D010832 3.6e-51 205.7 166 68.1
Thecc.04G278400 Theobroma cacao HOM05D008610 ORTHO05D010832 2.3e-29 133.3 191 44.5
Duzib151G0343 Durio zibethinus HOM05D008610 ORTHO05D010832 3.1e-26 122.9 190 43.7
TAR362G0442 Trochodendron aralioides HOM05D008610 ORTHO05D010832 9.0e-26 121.3 185 45.4
COL.COLO4_13922 Corchorus olitorius HOM05D008610 ORTHO05D010832 1.9e-23 113.6 173 41.0
Migut.G00203 Erythranthe guttata HOM05D008610 ORTHO05D010832 9.3e-23 111.3 188 35.6
CSS0018848 Camellia sinensis var. sinensis HOM05D008610 ORTHO05D010832 1.2e-22 110.9 166 47.0
QL06p007560 Quercus lobata HOM05D008610 ORTHO05D010832 2.1e-22 110.2 188 41.0
Nn4g26013 Nelumbo nucifera HOM05D008610 ORTHO05D010832 1.3e-21 107.5 184 39.7
CANSAT78G1094 Cannabis sativa HOM05D008610 ORTHO05D010832 1.6e-19 100.5 196 37.8
SGA_v2.0_scaffold57G20206 Striga asiatica HOM05D008610 ORTHO05D010832 2.8e-19 99.8 184 37.5
Rhsim02G0012900 Rhododendron simsii HOM05D008610 ORTHO05D010832 1.1e-18 97.8 127 50.4
unitig_748.g8579 Utricularia gibba HOM05D008610 ORTHO05D010832 2.0e-17 93.6 162 36.4
TWI09G0412 Tripterygium wilfordii HOM05D008610 ORTHO05D010832 2.9e-16 89.7 190 33.7
TPR.G28783 Trifolium pratense HOM05D008610 ORTHO05D010832 5.0e-16 89.0 175 33.7
Dinv44421 Davidia involucrata HOM05D008610 ORTHO05D010832 3.2e-15 86.3 114 47.4
Hma1.2p1_0823F.1_g224690 Hydrangea macrophylla HOM05D008610 ORTHO05D010832 4.2e-15 85.9 165 39.4
Glyma.07G251100 Glycine max HOM05D008610 ORTHO05D010832 7.2e-15 85.1 149 41.6
Glyma.17G023200 Glycine max HOM05D008610 ORTHO05D010832 2.1e-14 83.6 158 38.0
Lj4g0020809 Lotus japonicus HOM05D008610 ORTHO05D010832 2.1e-14 83.6 163 37.4
Phvul.003G101300 Phaseolus vulgaris HOM05D008610 ORTHO05D010832 2.1e-14 83.6 165 37.0
Actinidia23424 Actinidia chinensis HOM05D008610 ORTHO05D010832 4.6e-14 82.4 167 35.9
Sed0011065 Sechium edule HOM05D008610 ORTHO05D010832 7.9e-14 81.6 140 40.0
VMungo1215G1271 Vigna mungo HOM05D008610 ORTHO05D010832 3.0e-13 79.7 152 38.2
Ca_21546_v3 Cicer arietinum L. HOM05D008610 ORTHO05D010832 8.8e-13 78.2 140 41.4
arahy.Tifrunner.gnm1.ann1.L0EE17 Arachis hypogaea HOM05D008610 ORTHO05D010832 2.0e-12 77.0 138 38.4
Psat4g226320 Pisum sativum HOM05D008610 ORTHO05D010832 3.3e-12 76.3 143 38.5
arahy.Tifrunner.gnm1.ann1.2NND9M Arachis hypogaea HOM05D008610 ORTHO05D010832 4.4e-12 75.9 138 37.0
DCAR_027105 Daucus carota HOM05D008610 ORTHO05D010832 4.4e-12 75.9 120 38.3
ATR0706G219 Amborella trichopoda HOM05D008610 ORTHO05D010832 1.3e-11 74.3 182 33.0
PSO170G6844 Papaver somniferum HOM05D008610 ORTHO05D010832 1.5e-09 67.4 222 29.7
Medtr4g118830 Medicago truncatula HOM05D008610 ORTHO05D010832 2.6e-09 66.6 151 35.8
Aqoxy2G03100 Aquilegia oxysepala HOM05D008610 ORTHO05D010832 7.7e-09 65.1 142 31.7
ClCG05G005840 Citrullus lanatus HOM05D008610 ORTHO05D010832 3.8e-08 62.8 140 35.0
CsaV3_3G014190 Cucumis sativus L. HOM05D008610 ORTHO05D010832 3.8e-08 62.8 123 35.8
Lalb_Chr12g0196451 Lupinus albus HOM05D008610 ORTHO05D010832 8.5e-08 61.6 112 38.4
MELO3C006612.2 Cucumis melo HOM05D008610 ORTHO05D010832 1.4e-07 60.8 122 33.6
Atru.chr4.2765 Acer truncatum HOM05D008610 ORTHO05D010832 7.2e-07 58.5 99 40.4
Nn3g21308 Nelumbo nucifera HOM05D008610 ORTHO05D010832 7.2e-07 58.5 92 42.4
SalBow6G1753 Salvia bowleyana HOM05D003014 ORTHO05D003233 2.7e-06 56.6 142 29.6


User provided reference genes

Program Settings