Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen01g028510 Solanum pennellii HOM05D006719 ORTHO05D007063 2.5e-43 179.1 149 100.0
Solyc01g066900.4 Solanum lycopersicum HOM05D006719 ORTHO05D007063 1.2e-42 176.8 149 96.6
PGSC0003DMG400011322 Solanum tuberosum HOM05D006719 ORTHO05D007063 9.5e-35 150.6 149 93.3
Peaxi162Scf00534g00017 Petunia axillaris HOM05D006719 ORTHO05D007063 1.5e-24 116.7 151 53.6
Peaxi162Scf00024g00041 Petunia axillaris HOM05D006719 ORTHO05D007063 4.2e-22 108.6 140 82.1
Peaxi162Scf00024g00231 Petunia axillaris HOM05D006719 ORTHO05D007063 1.7e-20 103.2 129 85.3
vmacro08144 Vaccinium macrocarpon HOM05D006719 ORTHO05D007063 1.5e-19 100.1 150 72.7
vmacro22972 Vaccinium macrocarpon HOM05D006719 ORTHO05D007063 1.5e-19 100.1 150 72.7
Dinv44385 Davidia involucrata HOM05D006719 ORTHO05D007063 2.8e-18 95.9 152 71.1
CSS0008404 Camellia sinensis var. sinensis HOM05D006719 ORTHO05D007063 6.9e-17 91.3 150 67.3
CSS0019267 Camellia sinensis var. sinensis HOM05D006719 ORTHO05D007063 6.9e-17 91.3 150 67.3
Actinidia40259 Actinidia chinensis HOM05D006719 ORTHO05D007063 1.2e-16 90.5 150 75.3
Hma1.2p1_2670F.1_g326650 Hydrangea macrophylla HOM05D006719 ORTHO05D007063 1.3e-15 87.0 150 70.0
CAN.G129.20 Capsicum annuum HOM05D006719 ORTHO05D007063 1.7e-15 86.7 138 76.8
Thecc.04G284000 Theobroma cacao HOM05D006719 ORTHO05D007063 2.2e-15 86.3 149 69.1
COL.COLO4_13881 Corchorus olitorius HOM05D006719 ORTHO05D007063 1.1e-14 84.0 149 67.1
Gorai.011G189600 Gossypium raimondii HOM05D006719 ORTHO05D007063 1.1e-14 84.0 147 69.4
Oeu037752.1 Olea europaea HOM05D006719 ORTHO05D007063 1.4e-14 83.6 147 72.1
Duzib151G0940 Durio zibethinus HOM05D006719 ORTHO05D007063 1.9e-14 83.2 149 62.4
Nitab4.5_0000960g0100 Nicotiana tabacum HOM05D006719 ORTHO05D007063 2.4e-14 82.8 151 67.5
Gohir.D10G170100 Gossypium hirsutum HOM05D006719 ORTHO05D007063 7.1e-14 81.3 147 68.7
MSTRG.21797 Avicennia marina HOM05D006719 ORTHO05D007063 2.7e-13 79.3 147 58.5
Nitab4.5_0005076g0040 Nicotiana tabacum HOM05D006719 ORTHO05D007063 2.7e-13 79.3 149 67.1
GSVIVG01017752001 Vitis vinifera HOM05D006719 ORTHO05D007063 1.0e-12 77.4 155 69.0
Gohir.A10G163700 Gossypium hirsutum HOM05D006719 ORTHO05D007063 2.3e-12 76.3 147 67.3
Cfa015380 Carpinus fangiana HOM05D006719 ORTHO05D007063 3.0e-12 75.9 150 40.7
Dinv29768 Davidia involucrata HOM05D001303 ORTHO05D001129 3.0e-12 75.9 130 68.5
Duzib212G0625 Durio zibethinus HOM05D006719 ORTHO05D007063 3.9e-12 75.5 149 63.1
MD13G1169300 Malus domestica HOM05D006719 ORTHO05D007063 1.5e-11 73.6 125 69.6
MD16G1170500 Malus domestica HOM05D006719 ORTHO05D007063 1.9e-11 73.2 124 73.4
VMungo1309G0351 Vigna mungo HOM05D006719 ORTHO05D007063 2.5e-11 72.8 144 61.8
CiPaw.02G083300 Carya illinoinensis HOM05D006719 ORTHO05D007063 5.6e-11 71.6 132 68.9
Potri.008G207500 Populus trichocarpa HOM05D006719 ORTHO05D007063 9.6e-11 70.9 133 62.4
Gorai.006G263400 Gossypium raimondii HOM05D006719 ORTHO05D007063 1.3e-10 70.5 150 59.3
Manes.03G194500 Manihot esculenta HOM05D006719 ORTHO05D007063 1.3e-10 70.5 149 62.4
Potri.010G024600 Populus trichocarpa HOM05D006719 ORTHO05D007063 1.3e-10 70.5 150 64.0
HanXRQChr08g0227651 Helianthus annuus HOM05D006719 ORTHO05D007063 1.6e-10 70.1 127 69.3
Prupe.1G137900 Prunus persica HOM05D006719 ORTHO05D007063 2.1e-10 69.7 128 68.8
Carub.0007s2587 Capsella rubella HOM05D006719 ORTHO05D007063 3.7e-10 68.9 146 65.1
ECA233G1326 Erigeron canadensis HOM05D006719 ORTHO05D007063 3.7e-10 68.9 107 76.6
PSO170G6252 Papaver somniferum HOM05D006719 ORTHO05D007063 4.8e-10 68.6 136 66.2
PSO210G7501 Papaver somniferum HOM05D006719 ORTHO05D007063 4.8e-10 68.6 136 69.1
Ciclev10006148m.g Citrus clementina HOM05D006719 ORTHO05D007063 6.2e-10 68.2 154 60.4
CANSAT78G1100 Cannabis sativa HOM05D006719 ORTHO05D007063 1.1e-09 67.4 56 66.1
CiPaw.01G149100 Carya illinoinensis HOM05D006719 ORTHO05D007063 1.1e-09 67.4 59 64.4
Psat1g153440 Pisum sativum HOM05D006719 ORTHO05D007063 1.1e-09 67.4 123 70.7
DCAR_030531 Daucus carota HOM05D006719 ORTHO05D007063 1.4e-09 67.0 141 58.2
Duzib052G0445 Durio zibethinus HOM05D006719 ORTHO05D007063 4.0e-09 65.5 149 63.8
THA.LOC104821772 Tarenaya hassleriana HOM05D006719 ORTHO05D007063 5.3e-09 65.1 133 54.9
THA.LOC104820261 Tarenaya hassleriana HOM05D006719 ORTHO05D007063 6.9e-09 64.7 146 68.5
Atru.chr4.2828 Acer truncatum HOM05D006719 ORTHO05D007063 9.0e-09 64.3 150 67.3
Manes.15G012900 Manihot esculenta HOM05D006719 ORTHO05D007063 1.2e-08 63.9 149 62.4
Lj6g0006694 Lotus japonicus HOM05D006719 ORTHO05D007063 1.5e-08 63.5 152 65.8
Gohir.A09G239500 Gossypium hirsutum HOM05D006719 ORTHO05D007063 3.4e-08 62.4 59 64.4
Gohir.D09G240400 Gossypium hirsutum HOM05D006719 ORTHO05D007063 3.4e-08 62.4 59 64.4
Nn4g25876 Nelumbo nucifera HOM05D006719 ORTHO05D007063 5.8e-08 61.6 147 53.7
RcHm_v2.0_Chr4g0422101 Rosa chinensis HOM05D006719 ORTHO05D007063 7.6e-08 61.2 125 67.2
Phvul.009G247500 Phaseolus vulgaris HOM05D006719 ORTHO05D007063 1.3e-07 60.5 141 64.5
Cpa.g.sc16.165 Carica papaya HOM05D006719 ORTHO05D007063 1.7e-07 60.1 148 63.5
Ca_01942_v3 Cicer arietinum L. HOM05D006719 ORTHO05D007063 2.2e-07 59.7 131 70.2
Lalb_Chr15g0083521 Lupinus albus HOM05D006719 ORTHO05D007063 2.2e-07 59.7 157 64.3
ClCG05G006040 Citrullus lanatus HOM05D006719 ORTHO05D007063 2.9e-07 59.3 149 65.1
Glyma.15G147300 Glycine max HOM05D006719 ORTHO05D007063 2.9e-07 59.3 145 67.6
QL06p008791 Quercus lobata HOM05D006719 ORTHO05D007063 2.9e-07 59.3 141 65.2
SalBow2G1281 Salvia bowleyana HOM05D006719 ORTHO05D007063 4.9e-07 58.5 59 55.9
SGA_v2.0_scaffold147G36286 Striga asiatica HOM05D006719 ORTHO05D007063 4.9e-07 58.5 59 59.3
FAN12G0931 Fragaria x ananassa HOM05D006719 ORTHO05D007063 6.4e-07 58.2 153 60.1
Migut.G00270 Erythranthe guttata HOM05D006719 ORTHO05D007063 8.4e-07 57.8 112 66.1
FvH4_4g17930 Fragaria vesca HOM05D006719 ORTHO05D007063 8.4e-07 57.8 153 60.1
Actinidia01465 Actinidia chinensis HOM05D006719 ORTHO05D007063 1.1e-06 57.4 66 59.1
Aqoxy2G03000 Aquilegia oxysepala HOM05D000520 ORTHO05D000399 2.4e-06 56.2 57 59.6
TAR365G1095 Trochodendron aralioides HOM05D006719 ORTHO05D007063 2.4e-06 56.2 144 65.3
Aa31LG10G6320 Aethionema arabicum HOM05D006719 ORTHO05D007063 3.2e-06 55.8 140 65.0
Aqoxy5G00712 Aquilegia oxysepala HOM05D006719 ORTHO05D007063 5.5e-06 55.1 158 58.9
A08p11980 Brassica napus HOM05D006719 ORTHO05D007063 5.5e-06 55.1 51 60.8
Thhalv10026485m.g Eutrema salsugineum HOM05D006719 ORTHO05D007063 5.5e-06 55.1 137 63.5
unitig_37.g12394 Utricularia gibba HOM05D006719 ORTHO05D007063 5.5e-06 55.1 101 73.3
BraA08t33189Z Brassica rapa HOM05D006719 ORTHO05D007063 7.1e-06 54.7 141 58.2
MELO3C006659.2 Cucumis melo HOM05D006719 ORTHO05D007063 7.1e-06 54.7 148 62.8
CsaV3_3G014580 Cucumis sativus L. HOM05D006719 ORTHO05D007063 7.1e-06 54.7 143 64.3
Sp7g14160 Schrenkiella parvula HOM05D006719 ORTHO05D007063 9.3e-06 54.3 149 62.4
TAR362G0876 Trochodendron aralioides HOM05D006719 ORTHO05D007063 9.3e-06 54.3 126 65.1


User provided reference genes

Program Settings