Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen01g028370 Solanum pennellii HOM05D006680 ORTHO05D008206 2.2e-58 228.8 120 100.0
PGSC0003DMG400011317 Solanum tuberosum HOM05D006680 ORTHO05D008206 1.2e-56 223.0 120 95.8
CAN.G129.31 Capsicum annuum HOM05D006680 ORTHO05D008206 1.1e-54 216.5 120 92.5
Nitab4.5_0002761g0070 Nicotiana tabacum HOM05D006680 ORTHO05D008206 4.1e-52 208.0 121 89.3
Peaxi162Scf00246g00103 Petunia axillaris HOM05D006680 ORTHO05D008206 1.4e-49 199.5 117 88.0
Peaxi162Scf00646g00027 Petunia axillaris HOM05D006680 ORTHO05D008206 9.4e-49 196.8 120 81.7
Nitab4.5_0003466g0010 Nicotiana tabacum HOM05D006680 ORTHO05D008206 6.1e-48 194.1 120 80.0
Migut.G00148 Erythranthe guttata HOM05D006680 ORTHO05D008206 1.3e-45 186.4 120 77.5
Solyc12g099500.2 Solanum lycopersicum HOM05D006680 ORTHO05D008206 2.8e-45 185.3 116 78.4
Sopen12g034170 Solanum pennellii HOM05D006680 ORTHO05D008206 2.8e-45 185.3 116 78.4
Cc03_g01760 Coffea canephora HOM05D006680 ORTHO05D008206 3.7e-45 184.9 120 77.5
Ciclev10006049m.g Citrus clementina HOM05D006680 ORTHO05D008206 1.4e-44 183.0 121 77.7
PGSC0003DMG400004705 Solanum tuberosum HOM05D006680 ORTHO05D008206 1.8e-44 182.6 117 78.6
Oeu063359.1 Olea europaea HOM05D006680 ORTHO05D008206 6.9e-44 180.6 120 75.0
Sabra10G0008200 Salix brachista HOM05D006680 ORTHO05D008206 6.9e-44 180.6 116 78.4
Oeu001107.1 Olea europaea HOM05D006680 ORTHO05D008206 9.1e-44 180.3 120 74.2
Atru.chr4.2870 Acer truncatum HOM05D006680 ORTHO05D008206 1.5e-43 179.5 122 75.4
Cpa.g.sc16.184 Carica papaya HOM05D006680 ORTHO05D008206 2.6e-43 178.7 124 75.0
ClCG00G005610 Citrullus lanatus HOM05D006680 ORTHO05D008206 1.0e-42 176.8 120 75.8
TWI09G0327 Tripterygium wilfordii HOM05D006680 ORTHO05D008206 2.9e-42 175.3 118 76.3
Dinv29759 Davidia involucrata HOM05D006680 ORTHO05D008206 5.0e-42 174.5 117 72.6
Manes.15G011600 Manihot esculenta HOM05D006680 ORTHO05D008206 5.0e-42 174.5 123 75.6
QL06p009590 Quercus lobata HOM05D006680 ORTHO05D008206 5.0e-42 174.5 119 73.9
MD13G1167200 Malus domestica HOM05D006680 ORTHO05D008206 1.9e-41 172.6 122 73.8
SGA_v2.0_scaffold67G22622 Striga asiatica HOM05D006680 ORTHO05D008206 1.9e-41 172.6 120 70.0
CiPaw.01G147500 Carya illinoinensis HOM05D006680 ORTHO05D008206 2.1e-40 169.1 120 70.8
Lsat_1_v5_gn_6_95660 Lactuca sativa HOM05D006680 ORTHO05D008206 2.7e-40 168.7 120 71.7
Manes.03G196700 Manihot esculenta HOM05D006680 ORTHO05D008206 2.7e-40 168.7 119 71.4
Gohir.A10G164900 Gossypium hirsutum HOM05D006680 ORTHO05D008206 3.6e-40 168.3 118 73.7
Gohir.D10G171100 Gossypium hirsutum HOM05D006680 ORTHO05D008206 3.6e-40 168.3 118 73.7
Gorai.011G191100 Gossypium raimondii HOM05D006680 ORTHO05D008206 3.6e-40 168.3 118 73.7
BraA05t22848Z Brassica rapa HOM05D006680 ORTHO05D008206 4.7e-40 167.9 111 79.3
Potri.010G013100 Populus trichocarpa HOM05D006680 ORTHO05D008206 7.9e-40 167.2 116 73.3
Thecc.04G286300 Theobroma cacao HOM05D006680 ORTHO05D008206 7.9e-40 167.2 117 71.8
VMungo1215G2846 Vigna mungo HOM05D006680 ORTHO05D008206 1.0e-39 166.8 119 72.3
Potri.008G221000 Populus trichocarpa HOM05D006680 ORTHO05D008206 1.4e-39 166.4 116 75.0
CSS0014864 Camellia sinensis var. sinensis HOM05D006680 ORTHO05D008206 1.8e-39 166.0 118 71.2
CAN.G484.39 Capsicum annuum HOM05D006680 ORTHO05D008206 2.3e-39 165.6 118 72.9
DCAR_027070 Daucus carota HOM05D006680 ORTHO05D008206 2.3e-39 165.6 116 69.0
MSTRG.3906 Avicennia marina HOM05D006680 ORTHO05D008206 3.9e-39 164.9 120 67.5
CSS0010580 Camellia sinensis var. sinensis HOM05D006680 ORTHO05D008206 5.1e-39 164.5 118 71.2
THA.LOC104818922 Tarenaya hassleriana HOM05D006680 ORTHO05D008206 5.1e-39 164.5 120 71.7
A05p41250 Brassica napus HOM05D006680 ORTHO05D008206 6.7e-39 164.1 111 78.4
CiPaw.02G082300 Carya illinoinensis HOM05D006680 ORTHO05D008206 6.7e-39 164.1 120 68.3
Lalb_Chr13g0303561 Lupinus albus HOM05D006680 ORTHO05D008206 6.7e-39 164.1 116 75.9
BcaC05g29822 Brassica carinata HOM05D006680 ORTHO05D008206 8.8e-39 163.7 112 78.6
BolC5t34701H Brassica oleracea HOM05D006680 ORTHO05D008206 8.8e-39 163.7 112 78.6
A03p34950 Brassica napus HOM05D006680 ORTHO05D008206 1.5e-38 162.9 111 75.7
C03p42530 Brassica napus HOM05D006680 ORTHO05D008206 1.5e-38 162.9 111 75.7
BolC3t16523H Brassica oleracea HOM05D006680 ORTHO05D008206 1.5e-38 162.9 111 75.7
BraA03t12675Z Brassica rapa HOM05D006680 ORTHO05D008206 1.5e-38 162.9 111 75.7
Prupe.1G134500 Prunus persica HOM05D006680 ORTHO05D008206 1.5e-38 162.9 118 72.9
RcHm_v2.0_Chr4g0422811 Rosa chinensis HOM05D006680 ORTHO05D008206 2.0e-38 162.5 118 72.9
Lalb_Chr07g0177791 Lupinus albus HOM05D006680 ORTHO05D008206 5.7e-38 161.0 116 75.0
Hma1.2p1_1185F.1_g265000 Hydrangea macrophylla HOM05D006680 ORTHO05D008206 7.4e-38 160.6 120 73.3
Gohir.A09G238300 Gossypium hirsutum HOM05D006680 ORTHO05D008206 9.7e-38 160.2 119 68.9
ECA240G4018 Erigeron canadensis HOM05D006680 ORTHO05D008206 1.3e-37 159.8 111 71.2
Gohir.D09G239200 Gossypium hirsutum HOM05D006680 ORTHO05D008206 1.7e-37 159.5 119 68.9
Gorai.006G261900 Gossypium raimondii HOM05D006680 ORTHO05D008206 1.7e-37 159.5 119 68.9
FAN07G2082 Fragaria x ananassa HOM05D006680 ORTHO05D008206 2.2e-37 159.1 118 70.3
FAN12G3601 Fragaria x ananassa HOM05D006680 ORTHO05D008206 2.2e-37 159.1 118 70.3
FAN17G1034 Fragaria x ananassa HOM05D006680 ORTHO05D008206 2.2e-37 159.1 118 70.3
FvH4_4g18340 Fragaria vesca HOM05D006680 ORTHO05D008206 4.8e-37 157.9 118 69.5
Duzib151G0306 Durio zibethinus HOM05D006680 ORTHO05D008206 6.3e-37 157.5 119 70.6
FAN12G3976 Fragaria x ananassa HOM05D006680 ORTHO05D008206 1.1e-36 156.8 117 70.1
Duzib212G0294 Durio zibethinus HOM05D006680 ORTHO05D008206 1.4e-36 156.4 119 70.6
Ca_21488_v3 Cicer arietinum L. HOM05D006680 ORTHO05D008206 1.8e-36 156.0 119 72.3
Ah.08g214570 Amaranthus hybridus HOM05D006680 ORTHO05D008206 4.1e-36 154.8 121 68.6
HanXRQChr13g0419971 Helianthus annuus HOM05D006680 ORTHO05D008206 4.1e-36 154.8 117 67.5
Sed0015603 Sechium edule HOM05D006680 ORTHO05D008206 7.0e-36 154.1 120 65.8
AUR62040379 Chenopodium quinoa HOM05D006680 ORTHO05D008206 2.6e-35 152.1 121 67.8
DCAR_002469 Daucus carota HOM05D006680 ORTHO05D008206 3.5e-35 151.8 118 62.7
Sc19g0005290 Simmondsia chinensis HOM05D006680 ORTHO05D008206 4.5e-35 151.4 121 65.3
Sc19g0005370 Simmondsia chinensis HOM05D006680 ORTHO05D008206 4.5e-35 151.4 121 65.3
TAR370G0002 Trochodendron aralioides HOM05D006680 ORTHO05D008206 4.5e-35 151.4 119 69.7
Glyma.07G246700 Glycine max HOM05D006680 ORTHO05D008206 7.7e-35 150.6 113 69.0
Thhalv10021931m.g Eutrema salsugineum HOM05D006680 ORTHO05D008206 1.3e-34 149.8 109 71.6
Nn4g25792 Nelumbo nucifera HOM05D006680 ORTHO05D008206 1.3e-34 149.8 120 65.8
CARHR081510 Cardamine hirsuta HOM05D006680 ORTHO05D008206 1.7e-34 149.4 99 76.8
Carub.0003s0642 Capsella rubella HOM05D006680 ORTHO05D008206 2.2e-34 149.1 98 77.6
AT3G06890 Arabidopsis thaliana HOM05D006680 ORTHO05D008206 8.5e-34 147.1 99 76.8
Aqoxy2G02951 Aquilegia oxysepala HOM05D006680 ORTHO05D008206 1.1e-33 146.7 121 64.5
AL3G18020 Arabidopsis lyrata HOM05D006680 ORTHO05D008206 1.1e-33 146.7 99 76.8
Medtr4g120020 Medicago truncatula HOM05D006680 ORTHO05D008206 1.1e-33 146.7 108 70.4
MBI19_g25353_MAGBIO Magnolia biondii HOM05D006680 ORTHO05D008206 3.2e-33 145.2 121 64.5
Lj4g0016566 Lotus japonicus HOM05D006680 ORTHO05D008206 1.6e-32 142.9 91 79.1
Nn3g21479 Nelumbo nucifera HOM05D006680 ORTHO05D008206 1.6e-32 142.9 107 70.1
Sp3g05850 Schrenkiella parvula HOM05D006680 ORTHO05D008206 2.1e-32 142.5 97 75.3
CANSAT78G1139 Cannabis sativa HOM05D006680 ORTHO05D008206 1.0e-31 140.2 96 74.0
Sabra10G0008300 Salix brachista HOM05D006680 ORTHO05D008206 2.6e-30 135.6 115 62.6
Psat4g026840 Pisum sativum HOM05D006680 ORTHO05D008206 3.3e-30 135.2 92 73.9
TPR.G3164 Trifolium pratense HOM05D006680 ORTHO05D008206 7.4e-30 134.0 91 75.8
PSO832G1781 Papaver somniferum HOM05D006680 ORTHO05D008206 1.3e-29 133.3 114 61.4
DCAR_030521 Daucus carota HOM05D006680 ORTHO05D008206 2.2e-29 132.5 118 56.8
PSO210G6323 Papaver somniferum HOM05D006680 ORTHO05D008206 2.2e-29 132.5 114 63.2
PGR004G0310 Punica granatum HOM05D006680 ORTHO05D008206 2.2e-29 132.5 119 61.3
Phvul.003G097003 Phaseolus vulgaris HOM05D006680 ORTHO05D008206 2.8e-29 132.1 92 71.7
PGR031G3343 Punica granatum HOM05D006680 ORTHO05D008206 3.7e-29 131.7 116 55.2
HanXRQChr03g0089341 Helianthus annuus HOM05D006680 ORTHO05D008206 1.8e-28 129.4 120 58.3
MBI18_g06870_MAGBIO Magnolia biondii HOM05D006680 ORTHO05D008206 3.1e-28 128.6 117 60.7
PSO017G4993 Papaver somniferum HOM05D006680 ORTHO05D008206 2.6e-27 125.6 96 71.9
PSO170G5007 Papaver somniferum HOM05D006680 ORTHO05D008206 7.7e-27 124.0 96 70.8
MD16G1168200 Malus domestica HOM05D006680 ORTHO05D008206 3.8e-26 121.7 125 59.2
unitig_32.g11869 Utricularia gibba HOM05D006680 ORTHO05D008206 3.2e-25 118.6 120 52.5
ATR0796G044 Amborella trichopoda HOM05D006680 ORTHO05D008206 9.4e-25 117.1 113 53.1
Rhsim04G0223700 Rhododendron simsii HOM05D006680 ORTHO05D008206 4.7e-24 114.8 96 60.4
Rhsim09G0007300 Rhododendron simsii HOM05D006680 ORTHO05D008206 4.7e-24 114.8 96 60.4
HPP92_000110 Vanilla planifolia HOM05D006680 ORTHO05D008206 6.1e-24 114.4 112 54.5
Os03g0343800 Oryza sativa ssp. japonica HOM05D006680 ORTHO05D008206 6.7e-23 110.9 107 55.1
Zm00001eb124100 Zea mays HOM05D006680 ORTHO05D008206 1.2e-22 110.2 116 52.6
Thecc.09G272700 Theobroma cacao HOM05D006680 ORTHO05D008206 4.8e-21 104.8 86 67.4
Zm00001eb016470 Zea mays HOM05D006680 ORTHO05D008206 1.8e-20 102.8 111 50.5
Thecc.05G268700 Theobroma cacao HOM05D006680 ORTHO05D008206 4.1e-20 101.7 87 63.2
Eucgr.H03932 Eucalyptus grandis HOM05D006680 ORTHO05D008206 1.3e-18 96.7 125 48.8
Zm00001eb394930 Zea mays HOM05D006680 ORTHO05D008206 1.9e-17 92.8 92 53.3
TAR633G0386 Trochodendron aralioides HOM05D006680 ORTHO05D008206 1.4e-15 86.7 123 46.3
Os07g0673801 Oryza sativa ssp. japonica HOM05D006680 ORTHO05D008206 4.8e-13 78.2 110 43.6
SalBow5G0837 Salvia bowleyana HOM05D006680 ORTHO05D008206 1.6e-11 73.2 117 35.9
MELO3C006671.2 Cucumis melo HOM05D006680 ORTHO05D008206 1.7e-10 69.7 52 69.2


User provided reference genes

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