Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen01g018140 Solanum pennellii HOM05D008695 ORTHO05D001422 6.2e-194 680.6 346 100.0
Sopen01g011600 Solanum pennellii HOM05D008695 ORTHO05D001422 1.2e-176 623.2 345 91.3
Sopen08g011480 Solanum pennellii HOM05D008695 ORTHO05D001422 7.2e-134 481.1 547 53.0
Sopen05g019090 Solanum pennellii HOM05D008695 ORTHO05D001422 6.1e-117 424.9 345 67.2
Sopen01g027720 Solanum pennellii HOM05D008695 ORTHO05D001422 5.9e-104 381.7 286 71.7
Sopen03g015690 Solanum pennellii HOM05D008695 ORTHO05D001422 4.5e-96 355.5 545 43.9
Sopen01g011610 Solanum pennellii HOM05D000047 ORTHO05D000044 2.8e-93 346.3 249 75.1
Sopen03g011960 Solanum pennellii HOM05D008695 ORTHO05D001422 2.5e-78 296.6 287 57.8
Sopen06g011080 Solanum pennellii HOM05D008695 ORTHO05D001422 4.7e-77 292.4 285 57.2
Sopen01g013960 Solanum pennellii HOM05D008695 ORTHO05D001422 1.4e-76 290.8 285 56.8
Sopen11g014810 Solanum pennellii HOM05D008695 ORTHO05D001422 5.2e-76 288.9 285 57.9
Sopen06g005030 Solanum pennellii HOM05D008695 ORTHO05D001422 8.9e-76 288.1 285 56.5
Sopen02g008890 Solanum pennellii HOM05D008695 ORTHO05D001422 6.4e-74 282.0 285 56.1
Sopen07g009220 Solanum pennellii HOM05D008695 ORTHO05D001422 6.4e-74 282.0 285 55.8
Sopen11g013600 Solanum pennellii HOM05D008695 ORTHO05D001422 1.2e-72 277.7 275 56.7
Sopen11g018120 Solanum pennellii HOM05D008695 ORTHO05D001422 2.3e-71 273.5 285 55.1
Sopen07g013820 Solanum pennellii HOM05D000047 ORTHO05D001422 2.8e-69 266.5 271 55.7
Sopen10g008400 Solanum pennellii HOM05D000047 ORTHO05D000044 6.8e-68 261.9 259 57.9
Sopen07g017450 Solanum pennellii HOM05D008695 ORTHO05D001422 1.5e-67 260.8 350 46.9
Sopen01g015000 Solanum pennellii HOM05D008695 ORTHO05D001422 2.0e-67 260.4 254 58.3
Sopen02g006620 Solanum pennellii HOM05D000047 ORTHO05D000589 7.8e-64 248.4 360 44.7
Sopen03g011910 Solanum pennellii HOM05D008695 ORTHO05D001422 6.6e-63 245.4 219 60.7
Sopen05g021760 Solanum pennellii HOM05D008695 ORTHO05D001422 2.6e-59 233.4 287 48.4
Sopen04g017310 Solanum pennellii HOM05D008695 ORTHO05D001422 2.2e-58 230.3 219 58.9
Sopen12g021750 Solanum pennellii HOM05D000047 ORTHO05D000044 1.0e-55 221.5 285 47.0
Sopen12g016390 Solanum pennellii HOM05D008695 ORTHO05D001422 9.6e-54 214.9 223 58.3
Sopen12g025930 Solanum pennellii HOM05D008695 ORTHO05D001422 6.9e-52 208.8 221 55.7
Sopen04g013010 Solanum pennellii HOM05D008695 ORTHO05D001422 2.6e-51 206.8 190 60.5
Sopen01g017210 Solanum pennellii HOM05D000047 ORTHO05D001422 5.8e-51 205.7 203 59.6
Sopen09g011950 Solanum pennellii HOM05D000047 ORTHO05D000044 4.8e-45 186.0 185 56.2
Sopen01g020530 Solanum pennellii HOM05D000047 ORTHO05D000044 6.2e-45 185.7 166 63.9
Sopen09g014930 Solanum pennellii HOM05D008695 ORTHO05D001422 1.1e-44 184.9 223 50.2
CAN.G1452.1 Capsicum annuum HOM05D008695 ORTHO05D006375 2.0e-43 180.6 233 44.6
Sopen01g010260 Solanum pennellii HOM05D000047 ORTHO05D000044 7.6e-43 178.7 173 57.8
Sopen07g015290 Solanum pennellii HOM05D008695 ORTHO05D001422 6.4e-42 175.6 207 52.2
Sopen06g005040 Solanum pennellii HOM05D008695 ORTHO05D001422 6.7e-39 165.6 345 36.8
Sopen12g017920 Solanum pennellii HOM05D008695 ORTHO05D001422 1.8e-36 157.5 80 97.5
Sopen01g017890 Solanum pennellii HOM05D000047 ORTHO05D000589 1.5e-35 154.5 80 95.0
Sopen07g017290 Solanum pennellii HOM05D000047 ORTHO05D000589 1.5e-35 154.5 153 62.1
Sopen03g009580 Solanum pennellii HOM05D008695 ORTHO05D001422 9.9e-35 151.8 80 92.5
Sopen12g012670 Solanum pennellii HOM05D000047 ORTHO05D000589 1.4e-33 147.9 136 61.8
Sopen11g018650 Solanum pennellii HOM05D000047 ORTHO05D001422 9.3e-33 145.2 80 90.0
Sopen10g020210 Solanum pennellii HOM05D008695 ORTHO05D001422 5.8e-27 125.9 119 57.1
Nitab4.5_0026237g0010 Nicotiana tabacum HOM05D008440 ORTHO05D001422 2.5e-25 120.6 228 32.0
Nitab4.5_0005061g0030 Nicotiana tabacum HOM05D008440 ORTHO05D001422 7.1e-25 119.0 207 33.8
Sopen09g024660 Solanum pennellii HOM05D002047 ORTHO05D001422 2.1e-24 117.5 62 90.3
Nitab4.5_0024891g0010 Nicotiana tabacum HOM05D008440 ORTHO05D006375 4.6e-24 116.3 294 27.9
Nitab4.5_0000652g0010 Nicotiana tabacum HOM05D008440 ORTHO05D001422 6.0e-24 115.9 294 27.9
Nitab4.5_0000235g0100 Nicotiana tabacum HOM05D008440 ORTHO05D006375 5.1e-23 112.8 293 28.3
Nitab4.5_0004952g0010 Nicotiana tabacum HOM05D008440 ORTHO05D001422 8.7e-23 112.1 138 40.6
Sopen06g007550 Solanum pennellii HOM05D002047 ORTHO05D001422 8.7e-23 112.1 62 87.1
Solyc04g025755.1 Solanum lycopersicum HOM05D002047 ORTHO05D001422 3.3e-22 110.2 62 87.1
Nitab4.5_0015285g0010 Nicotiana tabacum HOM05D008440 ORTHO05D006375 1.3e-21 108.2 126 44.4
Sopen12g026490 Solanum pennellii HOM05D000047 ORTHO05D000589 1.3e-21 108.2 55 96.4
Sopen08g018560 Solanum pennellii HOM05D000047 ORTHO05D000044 1.6e-21 107.8 107 55.1
Nitab4.5_0000157g0030 Nicotiana tabacum HOM05D008440 ORTHO05D011334 2.2e-21 107.5 202 32.2
Sopen07g013240 Solanum pennellii HOM05D000047 ORTHO05D000589 2.2e-21 107.5 55 94.5
Nitab4.5_0000587g0030 Nicotiana tabacum HOM05D004926 ORTHO05D006375 2.8e-21 107.1 203 34.5
Nitab4.5_0000109g0590 Nicotiana tabacum HOM05D004926 ORTHO05D006375 4.8e-21 106.3 231 30.7
Sopen02g004680 Solanum pennellii HOM05D008695 ORTHO05D001422 8.2e-21 105.5 54 96.3
Nitab4.5_0001832g0060 Nicotiana tabacum HOM05D004926 ORTHO05D006375 2.4e-20 104.0 203 31.0
Nitab4.5_0009741g0030 Nicotiana tabacum HOM05D004926 ORTHO05D006375 6.9e-20 102.4 204 29.4
Nitab4.5_0000199g0080 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.0e-18 98.6 228 31.1
Nitab4.5_0000235g0090 Nicotiana tabacum HOM05D008440 ORTHO05D006375 1.0e-18 98.6 82 50.0
Nitab4.5_0004532g0050 Nicotiana tabacum HOM05D004926 ORTHO05D006375 3.8e-18 96.7 299 28.8
Nitab4.5_0002851g0010 Nicotiana tabacum HOM05D008440 ORTHO05D011334 8.5e-18 95.5 98 42.9
Nitab4.5_0000017g0210 Nicotiana tabacum HOM05D004926 ORTHO05D001422 1.1e-17 95.1 130 38.5
Nitab4.5_0000342g0240 Nicotiana tabacum HOM05D008440 ORTHO05D001422 1.4e-17 94.7 96 42.7
Nitab4.5_0002540g0110 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.4e-17 94.7 206 28.2
Nitab4.5_0001850g0050 Nicotiana tabacum HOM05D008440 ORTHO05D006375 2.5e-17 94.0 230 27.4
Sopen05g010350 Solanum pennellii HOM05D000047 ORTHO05D000044 3.2e-17 93.6 124 41.9
Nitab4.5_0000046g0100 Nicotiana tabacum HOM05D004926 ORTHO05D006375 4.2e-17 93.2 218 28.0
Nitab4.5_0001544g0030 Nicotiana tabacum HOM05D008440 ORTHO05D001422 7.2e-17 92.4 188 37.2
Nitab4.5_0008949g0010 Nicotiana tabacum HOM05D008440 ORTHO05D006375 7.2e-17 92.4 242 32.6
Nitab4.5_0007241g0020 Nicotiana tabacum HOM05D008440 ORTHO05D001422 1.2e-16 91.7 136 38.2
Nitab4.5_0000035g0160 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.6e-16 91.3 239 28.5
Nitab4.5_0028204g0010 Nicotiana tabacum HOM05D004926 ORTHO05D006375 3.6e-16 90.1 179 31.3
Sopen03g009300 Solanum pennellii HOM05D004926 ORTHO05D013907 1.0e-15 88.6 291 26.5
Sopen10g027680 Solanum pennellii HOM05D004926 ORTHO05D013907 6.7e-15 85.9 275 27.3
Sopen08g015910 Solanum pennellii HOM05D000047 ORTHO05D000044 1.5e-14 84.7 90 48.9
Nitab4.5_0005513g0020 Nicotiana tabacum HOM05D008440 ORTHO05D006375 2.5e-14 84.0 88 43.2
Nitab4.5_0001239g0190 Nicotiana tabacum HOM05D008440 ORTHO05D006375 3.3e-14 83.6 73 49.3
Nitab4.5_0001392g0080 Nicotiana tabacum HOM05D004926 ORTHO05D006375 2.2e-13 80.9 207 28.0
Nitab4.5_0002740g0060 Nicotiana tabacum HOM05D004926 ORTHO05D006375 2.2e-13 80.9 242 29.3
Nitab4.5_0000396g0210 Nicotiana tabacum HOM05D004926 ORTHO05D006375 2.8e-13 80.5 118 34.7
Nitab4.5_0000708g0040 Nicotiana tabacum HOM05D008440 ORTHO05D006375 1.4e-12 78.2 217 27.2
Nitab4.5_0000643g0040 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.8e-12 77.8 121 33.1
Nitab4.5_0000599g0040 Nicotiana tabacum HOM05D004926 ORTHO05D006375 2.4e-12 77.4 189 26.5
Nitab4.5_0005138g0020 Nicotiana tabacum HOM05D004926 ORTHO05D006375 3.1e-12 77.0 122 33.6
Nitab4.5_0000524g0020 Nicotiana tabacum HOM05D004926 ORTHO05D006375 4.1e-12 76.6 173 28.3
Nitab4.5_0000324g0260 Nicotiana tabacum HOM05D004926 ORTHO05D006375 5.3e-12 76.3 150 31.3
Nitab4.5_0026708g0010 Nicotiana tabacum HOM05D004926 ORTHO05D006375 6.9e-12 75.9 159 32.1
Nitab4.5_0000637g0010 Nicotiana tabacum HOM05D008440 ORTHO05D000292 1.2e-11 75.1 252 26.2
Nitab4.5_0003972g0050 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.5e-11 74.7 122 32.8
Nitab4.5_0000775g0180 Nicotiana tabacum HOM05D004926 ORTHO05D006375 2.6e-11 73.9 117 32.5
Nitab4.5_0000073g0430 Nicotiana tabacum HOM05D004926 ORTHO05D006375 4.5e-11 73.2 122 32.0
Sopen04g023930 Solanum pennellii HOM05D004926 ORTHO05D013907 4.5e-11 73.2 282 24.8
Nitab4.5_0002382g0010 Nicotiana tabacum HOM05D008440 ORTHO05D006375 5.9e-11 72.8 134 30.6
Nitab4.5_0003555g0010 Nicotiana tabacum HOM05D004926 ORTHO05D006375 5.9e-11 72.8 142 31.7
Nitab4.5_0000053g0110 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.0e-10 72.0 118 33.9
Nitab4.5_0005614g0050 Nicotiana tabacum HOM05D008440 ORTHO05D001422 1.0e-10 72.0 167 32.9
Nitab4.5_0000326g0140 Nicotiana tabacum HOM05D004926 ORTHO05D006375 2.2e-10 70.9 158 30.4
Nitab4.5_0004478g0070 Nicotiana tabacum HOM05D008440 ORTHO05D006375 2.9e-10 70.5 69 49.3
Nitab4.5_0001299g0120 Nicotiana tabacum HOM05D004926 ORTHO05D006375 3.8e-10 70.1 143 30.8
Nitab4.5_0003273g0050 Nicotiana tabacum HOM05D004926 ORTHO05D001422 3.8e-10 70.1 245 24.1
Nitab4.5_0000372g0080 Nicotiana tabacum HOM05D004926 ORTHO05D006375 6.5e-10 69.3 155 29.7
Nitab4.5_0000926g0050 Nicotiana tabacum HOM05D004926 ORTHO05D006375 6.5e-10 69.3 90 37.8
Nitab4.5_0000053g0240 Nicotiana tabacum HOM05D002047 ORTHO05D001422 8.5e-10 68.9 69 50.7
Nitab4.5_0002542g0080 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.4e-09 68.2 256 24.2
Nitab4.5_0006504g0010 Nicotiana tabacum HOM05D009073 ORTHO05D011334 2.5e-09 67.4 102 37.3
Nitab4.5_0006856g0010 Nicotiana tabacum HOM05D004926 ORTHO05D006375 2.5e-09 67.4 137 34.3
Sopen03g025130 Solanum pennellii HOM05D000047 ORTHO05D013907 2.5e-09 67.4 291 25.1
Nitab4.5_0000754g0320 Nicotiana tabacum HOM05D004926 ORTHO05D006375 3.2e-09 67.0 154 29.2
Nitab4.5_0000359g0150 Nicotiana tabacum HOM05D008440 ORTHO05D001422 5.5e-09 66.2 90 41.1
Nitab4.5_0004906g0060 Nicotiana tabacum HOM05D002047 ORTHO05D001422 5.5e-09 66.2 69 52.2
Nitab4.5_0005446g0020 Nicotiana tabacum HOM05D004926 ORTHO05D006375 5.5e-09 66.2 158 30.4
Nitab4.5_0012379g0020 Nicotiana tabacum HOM05D004926 ORTHO05D006375 7.2e-09 65.9 123 32.5
PGSC0003DMG400022101 Solanum tuberosum HOM05D008695 ORTHO05D001422 9.4e-09 65.5 64 50.0
Nitab4.5_0005729g0090 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.2e-08 65.1 146 28.8
Sopen02g009260 Solanum pennellii HOM05D000047 ORTHO05D009630 1.2e-08 65.1 214 30.8
Nitab4.5_0016905g0010 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.6e-08 64.7 111 32.4
Sopen03g019140 Solanum pennellii HOM05D000047 ORTHO05D000044 1.6e-08 64.7 118 32.2
PGSC0003DMG400014865 Solanum tuberosum HOM05D008695 ORTHO05D001422 1.6e-08 64.7 101 38.6
Nitab4.5_0000332g0090 Nicotiana tabacum HOM05D004926 ORTHO05D006375 2.1e-08 64.3 207 27.1
Nitab4.5_0000915g0050 Nicotiana tabacum HOM05D004926 ORTHO05D001422 2.1e-08 64.3 148 28.4
Nitab4.5_0007424g0030 Nicotiana tabacum HOM05D008440 ORTHO05D001422 2.1e-08 64.3 48 58.3
Sopen01g029360 Solanum pennellii HOM05D000047 ORTHO05D000589 2.1e-08 64.3 103 35.9
Nitab4.5_0000318g0210 Nicotiana tabacum HOM05D004926 ORTHO05D001422 2.7e-08 63.9 62 46.8
Nitab4.5_0006940g0020 Nicotiana tabacum HOM05D000413 ORTHO05D000292 2.7e-08 63.9 151 31.1
Nitab4.5_0000727g0020 Nicotiana tabacum HOM05D004926 ORTHO05D006375 3.6e-08 63.5 199 28.1
Nitab4.5_0001955g0140 Nicotiana tabacum HOM05D008440 ORTHO05D006375 3.6e-08 63.5 256 23.8
Sopen05g027190 Solanum pennellii HOM05D007487 ORTHO05D008561 3.6e-08 63.5 280 21.1
Nitab4.5_0004541g0030 Nicotiana tabacum HOM05D004926 ORTHO05D006375 4.7e-08 63.2 161 29.2
Nitab4.5_0007680g0020 Nicotiana tabacum HOM05D004926 ORTHO05D006375 4.7e-08 63.2 149 27.5
Nitab4.5_0000068g0110 Nicotiana tabacum HOM05D004926 ORTHO05D006375 7.9e-08 62.4 153 30.7
Nitab4.5_0001871g0010 Nicotiana tabacum HOM05D008440 ORTHO05D006375 7.9e-08 62.4 105 29.5
Sopen09g011900 Solanum pennellii HOM05D000047 ORTHO05D000044 1.4e-07 61.6 59 61.0
Nitab4.5_0000118g0050 Nicotiana tabacum HOM05D008695 ORTHO05D001422 1.8e-07 61.2 69 47.8
Nitab4.5_0002664g0100 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.8e-07 61.2 149 30.9
Nitab4.5_0003692g0020 Nicotiana tabacum HOM05D004926 ORTHO05D006375 2.3e-07 60.8 212 26.4
Nitab4.5_0010681g0010 Nicotiana tabacum HOM05D004926 ORTHO05D006375 2.3e-07 60.8 144 28.5
Sopen07g014540 Solanum pennellii HOM05D007487 ORTHO05D008561 3.0e-07 60.5 210 22.4
Nitab4.5_0000116g0480 Nicotiana tabacum HOM05D004926 ORTHO05D001422 3.9e-07 60.1 54 50.0
Nitab4.5_0001574g0110 Nicotiana tabacum HOM05D004926 ORTHO05D006375 3.9e-07 60.1 175 29.1
Nitab4.5_0013472g0010 Nicotiana tabacum HOM05D004926 ORTHO05D006375 3.9e-07 60.1 161 29.2
Nitab4.5_0022418g0010 Nicotiana tabacum HOM05D004926 ORTHO05D006375 3.9e-07 60.1 153 30.1
Nitab4.5_0000421g0090 Nicotiana tabacum HOM05D008440 ORTHO05D006375 5.1e-07 59.7 77 42.9
Nitab4.5_0001510g0070 Nicotiana tabacum HOM05D002047 ORTHO05D001422 5.1e-07 59.7 205 26.8
Nitab4.5_0001634g0030 Nicotiana tabacum HOM05D004926 ORTHO05D006375 8.8e-07 58.9 279 23.3
Nitab4.5_0002045g0120 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.1e-06 58.5 166 30.7
Nitab4.5_0003000g0090 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.1e-06 58.5 204 26.0
Sopen03g025020 Solanum pennellii HOM05D007487 ORTHO05D008561 1.5e-06 58.2 190 23.2
Nitab4.5_0001843g0010 Nicotiana tabacum HOM05D004926 ORTHO05D006375 2.6e-06 57.4 110 33.6
Nitab4.5_0003691g0010 Nicotiana tabacum HOM05D008440 ORTHO05D006375 4.4e-06 56.6 94 33.0
Sopen04g012750 Solanum pennellii HOM05D007487 ORTHO05D008561 4.4e-06 56.6 164 23.2
Sopen09g007730 Solanum pennellii HOM05D008695 ORTHO05D001422 4.4e-06 56.6 43 60.5
Sopen10g022130 Solanum pennellii HOM05D000047 ORTHO05D000589 4.4e-06 56.6 60 51.7
Nitab4.5_0000708g0010 Nicotiana tabacum HOM05D008440 ORTHO05D001422 5.7e-06 56.2 215 27.0
Nitab4.5_0004364g0070 Nicotiana tabacum HOM05D004926 ORTHO05D006375 5.7e-06 56.2 123 29.3
Sopen01g011940 Solanum pennellii HOM05D000047 ORTHO05D013907 5.7e-06 56.2 282 24.8
Sopen05g011410 Solanum pennellii HOM05D004926 ORTHO05D013907 5.7e-06 56.2 284 24.3
Sopen05g025520 Solanum pennellii HOM05D000047 ORTHO05D000044 5.7e-06 56.2 56 46.4
Sopen07g015780 Solanum pennellii HOM05D007487 ORTHO05D008561 5.7e-06 56.2 119 27.7
Sopen12g015700 Solanum pennellii HOM05D008695 ORTHO05D001422 5.7e-06 56.2 56 46.4
Peaxi162Scf00620g00074 Petunia axillaris HOM05D002047 ORTHO05D001422 7.4e-06 55.8 74 44.6
Nitab4.5_0026367g0010 Nicotiana tabacum HOM05D008440 ORTHO05D001422 9.7e-06 55.5 245 23.3
Sopen05g009810 Solanum pennellii HOM05D002047 ORTHO05D001422 9.7e-06 55.5 76 39.5
Sopen05g013180 Solanum pennellii HOM05D002047 ORTHO05D001422 9.7e-06 55.5 76 39.5
Sopen06g007780 Solanum pennellii HOM05D009746 ORTHO05D008561 9.7e-06 55.5 220 25.5


User provided reference genes

Program Settings