Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen01g017590 Solanum pennellii HOM05D003515 ORTHO05D004347 1.2e-67 259.6 125 100.0
PGSC0003DMG402001013 Solanum tuberosum HOM05D003515 ORTHO05D004347 1.3e-53 213.0 125 85.6
Solyc01g034150.4 Solanum lycopersicum HOM05D003515 ORTHO05D004347 1.9e-52 209.1 125 84.0
Sopen01g017810 Solanum pennellii HOM05D003515 ORTHO05D004347 1.9e-52 209.1 125 84.0
CAN.G391.1 Capsicum annuum HOM05D003515 ORTHO05D004347 1.4e-50 203.0 125 82.4
Nitab4.5_0000254g0140 Nicotiana tabacum HOM05D003515 ORTHO05D004347 5.2e-50 201.1 125 81.6
Nitab4.5_0003190g0020 Nicotiana tabacum HOM05D003515 ORTHO05D004347 1.3e-48 196.4 125 80.0
TAR624G0550 Trochodendron aralioides HOM05D003515 ORTHO05D004347 3.2e-44 181.8 124 73.4
Peaxi162Scf00151g00110 Petunia axillaris HOM05D003515 ORTHO05D004347 9.4e-44 180.3 126 74.6
Dinv07004 Davidia involucrata HOM05D003515 ORTHO05D004347 1.0e-42 176.8 125 70.4
COL.COLO4_16231 Corchorus olitorius HOM05D003515 ORTHO05D004347 1.4e-42 176.4 125 71.2
arahy.Tifrunner.gnm1.ann1.NQ3I2Y Arachis hypogaea HOM05D003515 ORTHO05D004347 2.3e-42 175.6 124 70.2
GSVIVG01012151001 Vitis vinifera HOM05D003515 ORTHO05D004347 2.3e-42 175.6 125 71.2
MD10G1227200 Malus domestica HOM05D003515 ORTHO05D004347 4.0e-42 174.9 124 69.4
Cfa001125 Carpinus fangiana HOM05D003515 ORTHO05D004347 8.8e-42 173.7 125 69.6
Duzib132G1190 Durio zibethinus HOM05D003515 ORTHO05D004347 8.8e-42 173.7 125 69.6
RcHm_v2.0_Chr5g0021201 Rosa chinensis HOM05D003515 ORTHO05D004347 8.8e-42 173.7 124 68.5
Ciclev10014398m.g Citrus clementina HOM05D003515 ORTHO05D004347 1.2e-41 173.3 125 70.4
RcHm_v2.0_Chr5g0021171 Rosa chinensis HOM05D003515 ORTHO05D004347 1.5e-41 172.9 124 68.5
FvH4_3g13010 Fragaria vesca HOM05D003515 ORTHO05D004347 2.6e-41 172.2 124 68.5
FAN11G3814 Fragaria x ananassa HOM05D003515 ORTHO05D004347 2.6e-41 172.2 124 68.5
FAN21G1878 Fragaria x ananassa HOM05D003515 ORTHO05D004347 2.6e-41 172.2 124 68.5
Prupe.4G118000 Prunus persica HOM05D003515 ORTHO05D004347 3.4e-41 171.8 124 69.4
CSS0001709 Camellia sinensis var. sinensis HOM05D003515 ORTHO05D004347 4.4e-41 171.4 125 68.8
CSS0015899 Camellia sinensis var. sinensis HOM05D003515 ORTHO05D004347 4.4e-41 171.4 125 68.8
Haze_05267 Corylus avellana HOM05D003515 ORTHO05D004347 4.4e-41 171.4 125 68.8
CSS0031993 Camellia sinensis var. sinensis HOM05D003515 ORTHO05D004347 5.7e-41 171.0 125 68.8
Ca_18232_v3 Cicer arietinum L. HOM05D003515 ORTHO05D004347 5.7e-41 171.0 124 66.9
Gorai.009G257800 Gossypium raimondii HOM05D003515 ORTHO05D004347 5.7e-41 171.0 125 69.6
Medtr4g094755 Medicago truncatula HOM05D003515 ORTHO05D004347 5.7e-41 171.0 123 68.3
Gohir.D05G247100 Gossypium hirsutum HOM05D003515 ORTHO05D004347 7.5e-41 170.6 125 69.6
QL11p012061 Quercus lobata HOM05D003515 ORTHO05D004347 7.5e-41 170.6 125 68.0
Glyma.08G088900 Glycine max HOM05D003515 ORTHO05D004347 9.8e-41 170.2 124 68.5
Phvul.002G188000 Phaseolus vulgaris HOM05D003515 ORTHO05D004347 9.8e-41 170.2 124 67.7
arahy.Tifrunner.gnm1.ann1.ZWBN17 Arachis hypogaea HOM05D003515 ORTHO05D004347 1.7e-40 169.5 124 68.5
Thecc.02G003700 Theobroma cacao HOM05D003515 ORTHO05D004347 1.7e-40 169.5 125 68.8
Manes.03G074900 Manihot esculenta HOM05D003515 ORTHO05D004347 2.2e-40 169.1 125 68.0
vmacro03558 Vaccinium macrocarpon HOM05D003515 ORTHO05D004347 2.2e-40 169.1 125 68.8
Gohir.A05G245600 Gossypium hirsutum HOM05D003515 ORTHO05D004347 2.8e-40 168.7 125 68.8
Cc09_g05170 Coffea canephora HOM05D003515 ORTHO05D004347 4.8e-40 167.9 125 67.2
Psat7g087560 Pisum sativum HOM05D003515 ORTHO05D004347 4.8e-40 167.9 124 66.9
Rhsim13G0134000 Rhododendron simsii HOM05D003515 ORTHO05D004347 4.8e-40 167.9 125 68.0
RhsimUnG0176900 Rhododendron simsii HOM05D003515 ORTHO05D004347 4.8e-40 167.9 125 68.0
CSS0002085 Camellia sinensis var. sinensis HOM05D003515 ORTHO05D004347 6.3e-40 167.5 125 67.2
Oeu008987.4 Olea europaea HOM05D003515 ORTHO05D004347 6.3e-40 167.5 125 66.4
Eucgr.D00012 Eucalyptus grandis HOM05D003515 ORTHO05D004347 8.3e-40 167.2 125 66.4
Lj4g0010619 Lotus japonicus HOM05D003515 ORTHO05D004347 8.3e-40 167.2 124 66.1
VMungo0251G3194 Vigna mungo HOM05D003515 ORTHO05D004347 1.1e-39 166.8 124 66.1
Lj1C1149T14 Lonicera japonica HOM05D003515 ORTHO05D004347 2.4e-39 165.6 112 74.1
CiPaw.10G105500 Carya illinoinensis HOM05D003515 ORTHO05D004347 3.1e-39 165.2 125 66.4
Lalb_Chr13g0293411 Lupinus albus HOM05D003515 ORTHO05D004347 3.1e-39 165.2 124 66.9
EL10Ac7g17242 Beta vulgaris HOM05D003515 ORTHO05D004347 9.1e-39 163.7 125 64.8
CANSAT35G1862 Cannabis sativa HOM05D003515 ORTHO05D004347 1.6e-38 162.9 125 62.4
Sp2g09580 Schrenkiella parvula HOM05D003515 ORTHO05D004347 4.5e-38 161.4 122 67.2
THA.LOC104812921 Tarenaya hassleriana HOM05D003515 ORTHO05D004347 4.5e-38 161.4 125 67.2
Atru.chr10.315 Acer truncatum HOM05D003515 ORTHO05D004347 5.9e-38 161.0 125 65.6
FAN16G1075 Fragaria x ananassa HOM05D003515 ORTHO05D004347 5.9e-38 161.0 126 63.5
TPR.G22047 Trifolium pratense HOM05D003515 ORTHO05D004347 5.9e-38 161.0 124 64.5
TWI63G0015 Tripterygium wilfordii HOM05D003515 ORTHO05D004347 5.9e-38 161.0 124 65.3
Aa31LG9G8430 Aethionema arabicum HOM05D003515 ORTHO05D004347 7.7e-38 160.6 122 65.6
CsaV3_6G052970 Cucumis sativus L. HOM05D003515 ORTHO05D004347 7.7e-38 160.6 125 64.0
ECA238G0584 Erigeron canadensis HOM05D003515 ORTHO05D004347 1.3e-37 159.8 112 69.6
AUR62040332 Chenopodium quinoa HOM05D003515 ORTHO05D004347 2.3e-37 159.1 124 64.5
Potri.003G152600 Populus trichocarpa HOM05D003515 ORTHO05D004347 2.3e-37 159.1 125 60.8
MELO3C007012.2 Cucumis melo HOM05D003515 ORTHO05D004347 5.0e-37 157.9 124 63.7
Sabra03G0110800 Salix brachista HOM05D003515 ORTHO05D004347 5.0e-37 157.9 125 60.8
AT5G44740 Arabidopsis thaliana HOM05D003515 ORTHO05D004347 6.5e-37 157.5 122 64.8
CARHR178160 Cardamine hirsuta HOM05D003515 ORTHO05D004347 6.5e-37 157.5 122 65.6
AUR62037879 Chenopodium quinoa HOM05D003515 ORTHO05D004347 6.5e-37 157.5 124 63.7
Nn7g38343 Nelumbo nucifera HOM05D003515 ORTHO05D004347 1.1e-36 156.8 125 60.8
Aqoxy2G04030 Aquilegia oxysepala HOM05D003515 ORTHO05D004347 1.9e-36 156.0 124 59.7
ClCG01G025730 Citrullus lanatus HOM05D003515 ORTHO05D004347 4.2e-36 154.8 125 62.4
Phvul.007G100966 Phaseolus vulgaris HOM05D003515 ORTHO05D004347 4.2e-36 154.8 110 70.0
HanXRQChr14g0439721 Helianthus annuus HOM05D003515 ORTHO05D004347 7.2e-36 154.1 120 65.0
AL8G14790 Arabidopsis lyrata HOM05D003515 ORTHO05D004347 9.5e-36 153.7 122 64.8
BcaNung07103 Brassica carinata HOM05D003515 ORTHO05D004347 9.5e-36 153.7 122 63.1
BcaNung06821 Brassica carinata HOM05D003515 ORTHO05D004347 1.6e-35 152.9 122 62.3
A06p46940 Brassica napus HOM05D003515 ORTHO05D004347 1.6e-35 152.9 122 63.1
C07p27710 Brassica napus HOM05D003515 ORTHO05D004347 1.6e-35 152.9 122 63.1
BolC7t43303H Brassica oleracea HOM05D003515 ORTHO05D004347 1.6e-35 152.9 122 63.1
BraA06t27567Z Brassica rapa HOM05D003515 ORTHO05D004347 1.6e-35 152.9 122 63.1
Migut.M02011 Erythranthe guttata HOM05D003515 ORTHO05D004347 2.8e-35 152.1 118 64.4
Zm00001eb152650 Zea mays HOM05D003515 ORTHO05D004347 2.8e-35 152.1 110 65.5
Carub.0008s0352 Capsella rubella HOM05D003515 ORTHO05D004347 3.6e-35 151.8 124 63.7
Lsat_1_v5_gn_2_60141 Lactuca sativa HOM05D003515 ORTHO05D004347 3.6e-35 151.8 110 67.3
Os01g0757800 Oryza sativa ssp. japonica HOM05D003515 ORTHO05D004347 6.1e-35 151.0 119 62.2
PGR004G1774 Punica granatum HOM05D003515 ORTHO05D004347 6.1e-35 151.0 110 68.2
Thhalv10000807m.g Eutrema salsugineum HOM05D003515 ORTHO05D004347 1.4e-34 149.8 112 66.1
Sed0024374 Sechium edule HOM05D003515 ORTHO05D004347 4.0e-34 148.3 125 61.6
MSTRG.2876 Avicennia marina HOM05D003515 ORTHO05D004347 6.8e-34 147.5 116 62.9
PSO541G6439 Papaver somniferum HOM05D003515 ORTHO05D004347 1.7e-32 142.9 124 58.1
HPP92_026459 Vanilla planifolia HOM05D003515 ORTHO05D004347 1.7e-32 142.9 112 63.4
HPP92_014201 Vanilla planifolia HOM05D003515 ORTHO05D004347 8.3e-32 140.6 112 62.5
ATR0763G272 Amborella trichopoda HOM05D003515 ORTHO05D004347 1.1e-31 140.2 113 60.2
DCAR_007777 Daucus carota HOM05D003515 ORTHO05D004347 7.0e-31 137.5 125 57.6
Sc05g0004760 Simmondsia chinensis HOM05D003515 ORTHO05D004347 9.2e-31 137.1 125 60.0
unitig_748.g8071 Utricularia gibba HOM05D003515 ORTHO05D004347 1.2e-30 136.7 117 60.7
SGA_v2.0_scaffold298G47708 Striga asiatica HOM05D003515 ORTHO05D004347 1.6e-30 136.3 158 48.1
CSS0035626 Camellia sinensis var. sinensis HOM05D003515 ORTHO05D004347 1.9e-28 129.4 92 68.5
SEGI_02016 Sequoiadendron giganteum HOM05D003515 ORTHO05D004347 2.5e-28 129.0 112 58.9
CSS0002615 Camellia sinensis var. sinensis HOM05D003515 ORTHO05D004347 8.0e-27 124.0 92 66.3
RcHm_v2.0_Chr4g0406921 Rosa chinensis HOM05D003515 ORTHO05D004347 1.8e-26 122.9 91 67.0
Ah.15g091880 Amaranthus hybridus HOM05D003515 ORTHO05D004347 8.3e-24 114.0 97 60.8
AagrBONN_evm.TU.Sc2ySwM_228.4437 Anthoceros agrestis HOM05D003515 ORTHO05D004347 3.5e-22 108.6 116 50.0
SMO118G0165 Selaginella moellendorffii HOM05D003515 ORTHO05D004347 4.6e-22 108.2 110 52.7
CSS0041486 Camellia sinensis var. sinensis HOM05D003515 ORTHO05D004347 9.5e-20 100.5 92 58.7
CDE06G0149 Ceratophyllum demersum HOM05D003515 ORTHO05D004347 1.6e-19 99.8 106 48.1
CSS0025043 Camellia sinensis var. sinensis HOM05D003515 ORTHO05D004347 2.8e-19 99.0 92 56.5
CSS0030035 Camellia sinensis var. sinensis HOM05D003515 ORTHO05D004347 1.8e-18 96.3 92 56.5
SHI28056 Sapria himalayana HOM05D003515 ORTHO05D004347 2.0e-17 92.8 81 55.6
Mapoly0100s0031 Marchantia polymorpha HOM05D003515 ORTHO05D004347 1.7e-16 89.7 112 42.0
Pp3c8_17250 Physcomitrium patens HOM05D003515 ORTHO05D004347 6.4e-16 87.8 111 42.3
SMO222G0016 Selaginella moellendorffii HOM05D010282 ORTHO05D004347 1.1e-15 87.0 104 49.0
arahy.Tifrunner.gnm1.ann1.E07S37 Arachis hypogaea HOM05D003509 ORTHO05D001340 1.2e-11 73.6 51 64.7
Cpa.g.sc30.108 Carica papaya HOM05D003515 ORTHO05D010193 2.4e-07 59.3 54 51.9


User provided reference genes

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