Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen01g015020 Solanum pennellii HOM05D002907 ORTHO05D005554 2.5e-133 478.8 243 100.0
Sopen09g023780 Solanum pennellii HOM05D002907 ORTHO05D005554 1.6e-92 343.2 495 46.3
Sopen11g022000 Solanum pennellii HOM05D002907 ORTHO05D005554 1.6e-92 343.2 495 46.3
Sopen01g012720 Solanum pennellii HOM05D002907 ORTHO05D005554 7.6e-90 334.3 377 55.2
Solyc07g017280.3 Solanum lycopersicum HOM05D002907 ORTHO05D005554 1.6e-84 316.6 378 52.9
Solyc10g074430.2 Solanum lycopersicum HOM05D002907 ORTHO05D005554 5.5e-72 275.0 508 40.4
Solyc10g050400.1 Solanum lycopersicum HOM05D002907 ORTHO05D005554 3.9e-70 268.9 374 47.1
Sopen05g018840 Solanum pennellii HOM05D002907 ORTHO05D005554 3.9e-70 268.9 159 86.2
Solyc10g050370.2 Solanum lycopersicum HOM05D002907 ORTHO05D005554 4.1e-51 205.7 250 51.2
PGSC0003DMG400039849 Solanum tuberosum HOM05D002907 ORTHO05D005554 2.4e-35 153.3 188 48.9
Nitab4.5_0009770g0030 Nicotiana tabacum HOM05D002907 ORTHO05D005554 7.7e-34 148.3 293 32.1
Peaxi162Scf01370g00020 Petunia axillaris HOM05D002907 ORTHO05D005554 2.2e-33 146.7 306 30.4
Peaxi162Scf00505g00016 Petunia axillaris HOM05D002907 ORTHO05D005554 9.4e-32 141.4 290 30.7
Peaxi162Scf00661g00421 Petunia axillaris HOM05D002907 ORTHO05D005554 8.0e-31 138.3 275 31.6
Peaxi162Scf00168g01413 Petunia axillaris HOM05D002907 ORTHO05D005554 2.0e-29 133.7 261 31.4
Peaxi162Scf00816g00411 Petunia axillaris HOM05D002907 ORTHO05D005554 1.7e-28 130.6 268 31.0
Peaxi162Scf00005g02517 Petunia axillaris HOM05D002907 ORTHO05D005554 2.2e-28 130.2 306 27.1
Peaxi162Scf00073g02336 Petunia axillaris HOM05D002907 ORTHO05D005554 3.7e-28 129.4 269 31.2
Peaxi162Scf00635g00615 Petunia axillaris HOM05D002907 ORTHO05D005554 4.8e-28 129.0 301 28.6
Solyc08g028810.1 Solanum lycopersicum HOM05D002907 ORTHO05D005554 6.3e-28 128.6 289 32.9
Peaxi162Scf00386g00927 Petunia axillaris HOM05D002907 ORTHO05D005554 7.0e-27 125.2 306 26.8
Nitab4.5_0000011g0020 Nicotiana tabacum HOM05D002907 ORTHO05D005554 9.1e-27 124.8 292 30.1
Nitab4.5_0002986g0060 Nicotiana tabacum HOM05D002907 ORTHO05D005554 8.6e-25 118.2 287 28.9
Nitab4.5_0000162g0050 Nicotiana tabacum HOM05D002907 ORTHO05D005554 5.5e-24 115.5 96 56.2
Nitab4.5_0002746g0010 Nicotiana tabacum HOM05D002907 ORTHO05D005554 4.0e-22 109.4 99 52.5
Solyc10g054270.3 Solanum lycopersicum HOM05D002907 ORTHO05D005554 6.8e-22 108.6 197 37.1
CANSAT35G0321 Cannabis sativa HOM05D002907 ORTHO05D005554 8.9e-22 108.2 290 26.2
Nitab4.5_0002548g0050 Nicotiana tabacum HOM05D002907 ORTHO05D005554 2.8e-20 103.2 101 49.5
CAN.G865.8 Capsicum annuum HOM05D002907 ORTHO05D005554 5.4e-19 99.0 203 31.0
Solyc12g038200.3 Solanum lycopersicum HOM05D002700 ORTHO05D003228 7.0e-19 98.6 96 47.9
PGSC0003DMG400042496 Solanum tuberosum HOM05D002907 ORTHO05D005554 7.0e-19 98.6 73 64.4
Sopen06g010830 Solanum pennellii HOM05D002907 ORTHO05D005554 9.2e-19 98.2 96 47.9
CANSAT56G3687 Cannabis sativa HOM05D002907 ORTHO05D005554 2.0e-18 97.1 283 25.4
Solyc11g044605.1 Solanum lycopersicum HOM05D002907 ORTHO05D005554 3.5e-18 96.3 272 29.4
CANSAT01G2740 Cannabis sativa HOM05D002907 ORTHO05D005554 2.9e-17 93.2 96 44.8
DCAR_024022 Daucus carota HOM05D002907 ORTHO05D005554 6.6e-17 92.0 308 24.7
Nitab4.5_0026714g0010 Nicotiana tabacum HOM05D002907 ORTHO05D005554 6.6e-17 92.0 292 26.4
Nitab4.5_0001916g0050 Nicotiana tabacum HOM05D002907 ORTHO05D005554 8.6e-17 91.7 203 33.5
Sopen04g011410 Solanum pennellii HOM05D000004 ORTHO05D000002 1.9e-16 90.5 78 67.9
Sopen08g012630 Solanum pennellii HOM05D000096 ORTHO05D000045 5.6e-16 89.0 292 26.7
Solyc10g050350.1 Solanum lycopersicum HOM05D002907 ORTHO05D005554 7.3e-16 88.6 62 71.0
CAN.G98.12 Capsicum annuum HOM05D002907 ORTHO05D005554 9.5e-16 88.2 96 46.9
Solyc02g014410.1 Solanum lycopersicum HOM05D002907 ORTHO05D005554 3.6e-15 86.3 68 60.3
Nitab4.5_0000051g0020 Nicotiana tabacum HOM05D002907 ORTHO05D005554 4.7e-15 85.9 168 32.1
Solyc05g018860.1 Solanum lycopersicum HOM05D002907 ORTHO05D005554 8.0e-15 85.1 59 72.9
Nitab4.5_0008853g0020 Nicotiana tabacum HOM05D002907 ORTHO05D005554 1.8e-14 84.0 102 47.1
CANSAT78G0666 Cannabis sativa HOM05D002907 ORTHO05D005554 2.3e-14 83.6 289 22.1
Solyc04g018050.1 Solanum lycopersicum HOM05D045494 ORTHO05D026150 2.3e-14 83.6 146 41.8
Sopen04g009160 Solanum pennellii HOM05D045494 ORTHO05D026150 2.3e-14 83.6 146 41.8
CAN.G181.47 Capsicum annuum HOM05D002907 ORTHO05D005554 3.1e-14 83.2 274 24.5
Peaxi162Scf00203g01424 Petunia axillaris HOM05D002907 ORTHO05D005554 3.1e-14 83.2 95 45.3
Solyc02g044000.3 Solanum lycopersicum HOM05D002907 ORTHO05D005554 3.1e-14 83.2 296 25.7
DCAR_010335 Daucus carota HOM05D002907 ORTHO05D005554 5.8e-13 79.0 103 38.8
Sopen10g024010 Solanum pennellii HOM05D002907 ORTHO05D005554 5.8e-13 79.0 66 59.1
DCAR_020135 Daucus carota HOM05D002907 ORTHO05D005554 7.5e-13 78.6 283 21.9
Sopen05g016270 Solanum pennellii HOM05D004229 ORTHO05D026150 7.5e-13 78.6 54 72.2
CAN.G660.34 Capsicum annuum HOM05D002907 ORTHO05D005554 9.8e-13 78.2 216 26.9
Solyc10g054170.3 Solanum lycopersicum HOM05D028602 ORTHO05D005554 1.7e-12 77.4 51 66.7
DCAR_029864 Daucus carota HOM05D002907 ORTHO05D005554 2.2e-12 77.0 103 36.9
DCAR_030300 Daucus carota HOM05D002907 ORTHO05D005554 2.9e-12 76.6 98 36.7
DCAR_030301 Daucus carota HOM05D002907 ORTHO05D005554 2.9e-12 76.6 98 36.7
Peaxi162Scf00715g00062 Petunia axillaris HOM05D002907 ORTHO05D000065 8.3e-12 75.1 53 56.6
Solyc10g054240.1 Solanum lycopersicum HOM05D002907 ORTHO05D005554 8.3e-12 75.1 53 66.0
Nitab4.5_0002746g0030 Nicotiana tabacum HOM05D002907 ORTHO05D000065 1.4e-11 74.3 57 52.6
Solyc02g014340.1 Solanum lycopersicum HOM05D002907 ORTHO05D005554 2.4e-11 73.6 159 33.3
Peaxi162Scf00115g00007 Petunia axillaris HOM05D002907 ORTHO05D000065 2.0e-10 70.5 53 54.7
Solyc09g150120.1 Solanum lycopersicum HOM05D002907 ORTHO05D005554 2.0e-10 70.5 73 47.9
Nitab4.5_0005521g0020 Nicotiana tabacum HOM05D002907 ORTHO05D005554 7.8e-10 68.6 96 41.7
Nitab4.5_0000037g0150 Nicotiana tabacum HOM05D002907 ORTHO05D005554 1.7e-09 67.4 45 57.8
QL04p076347 Quercus lobata HOM05D002907 ORTHO05D000065 2.3e-09 67.0 180 28.9
Solyc06g034070.3 Solanum lycopersicum HOM05D002907 ORTHO05D005554 2.3e-09 67.0 64 43.8
Nitab4.5_0002746g0020 Nicotiana tabacum HOM05D002907 ORTHO05D005554 3.9e-09 66.2 108 40.7
CANSAT64G0304 Cannabis sativa HOM05D002907 ORTHO05D000065 5.0e-09 65.9 53 49.1
Sopen02g003400 Solanum pennellii HOM05D002907 ORTHO05D005554 5.0e-09 65.9 74 44.6
CAN.G1342.3 Capsicum annuum HOM05D001433 ORTHO05D005554 8.6e-09 65.1 131 33.6
DCAR_027158 Daucus carota HOM05D002907 ORTHO05D005554 8.6e-09 65.1 106 36.8
QL07p005779 Quercus lobata HOM05D002907 ORTHO05D005554 8.6e-09 65.1 86 38.4
QL07p006362 Quercus lobata HOM05D002907 ORTHO05D005554 8.6e-09 65.1 86 38.4
Nitab4.5_0000488g0200 Nicotiana tabacum HOM05D002907 ORTHO05D005554 1.1e-08 64.7 53 47.2
CAN.G542.9 Capsicum annuum HOM05D002907 ORTHO05D005554 1.9e-08 63.9 158 33.5
QL93p0107_0026 Quercus lobata HOM05D002907 ORTHO05D005554 1.9e-08 63.9 79 35.4
CAN.G419.22 Capsicum annuum HOM05D002907 ORTHO05D005554 2.5e-08 63.5 44 56.8
Nitab4.5_0001245g0050 Nicotiana tabacum HOM05D002907 ORTHO05D000065 2.5e-08 63.5 57 47.4
QL05p044516 Quercus lobata HOM05D002907 ORTHO05D000065 3.3e-08 63.2 96 28.1
QL93p0100_0313 Quercus lobata HOM05D000038 ORTHO05D000612 3.3e-08 63.2 96 28.1
Peaxi162Scf00431g00511 Petunia axillaris HOM05D002907 ORTHO05D005554 4.3e-08 62.8 73 38.4
Peaxi162Scf00871g00034 Petunia axillaris HOM05D002907 ORTHO05D005554 7.3e-08 62.0 214 25.2
CAN.G183.9 Capsicum annuum HOM05D002907 ORTHO05D005554 9.5e-08 61.6 70 41.4
QL10p011037 Quercus lobata HOM05D002907 ORTHO05D000065 9.5e-08 61.6 51 43.1
Nitab4.5_0000231g0360 Nicotiana tabacum HOM05D002907 ORTHO05D005554 2.1e-07 60.5 48 47.9
CAN.G665.22 Capsicum annuum HOM05D002907 ORTHO05D005554 6.2e-07 58.9 246 22.4
Nitab4.5_0000359g0030 Nicotiana tabacum HOM05D002907 ORTHO05D005554 6.2e-07 58.9 74 43.2
Peaxi162Scf00297g00049 Petunia axillaris HOM05D002907 ORTHO05D005554 1.4e-06 57.8 73 35.6
QL06p039579 Quercus lobata HOM05D002907 ORTHO05D000065 1.4e-06 57.8 60 41.7
CANSAT01G3093 Cannabis sativa HOM05D002907 ORTHO05D005554 1.8e-06 57.4 44 52.3
COL.COLO4_24757 Corchorus olitorius HOM05D025352 ORTHO05D025141 1.8e-06 57.4 106 25.5
Hma1.2p1_0006F.1_g004680 Hydrangea macrophylla HOM05D000096 ORTHO05D000045 6.8e-06 55.5 98 26.5
CAN.G25.7 Capsicum annuum HOM05D002907 ORTHO05D005554 8.9e-06 55.1 72 38.9
QL93p0160_0004 Quercus lobata HOM05D002907 ORTHO05D000065 8.9e-06 55.1 97 27.8


User provided reference genes

Program Settings