Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen01g011730 Solanum pennellii HOM05D004064 ORTHO05D009561 1.4e-75 286.2 142 100.0
Sopen12g005860 Solanum pennellii HOM05D000017 ORTHO05D000013 2.7e-63 245.4 145 88.3
Sopen05g012050 Solanum pennellii HOM05D000017 ORTHO05D000013 3.5e-63 245.0 145 86.2
Sopen05g012450 Solanum pennellii HOM05D000017 ORTHO05D009561 7.9e-63 243.8 145 87.6
Sopen08g001370 Solanum pennellii HOM05D000017 ORTHO05D000013 7.9e-63 243.8 145 87.6
Sopen09g011090 Solanum pennellii HOM05D000017 ORTHO05D009561 7.9e-63 243.8 145 87.6
Sopen11g012650 Solanum pennellii HOM05D000017 ORTHO05D009561 7.9e-63 243.8 145 87.6
Sopen11g026090 Solanum pennellii HOM05D000017 ORTHO05D000013 7.9e-63 243.8 145 87.6
Sopen11g013980 Solanum pennellii HOM05D000017 ORTHO05D009561 1.8e-62 242.7 145 86.9
Sopen10g011860 Solanum pennellii HOM05D004064 ORTHO05D009561 3.3e-61 238.4 144 85.4
Sopen06g017430 Solanum pennellii HOM05D000017 ORTHO05D000013 5.7e-61 237.7 145 85.5
Sopen10g010720 Solanum pennellii HOM05D000017 ORTHO05D009561 2.4e-59 232.3 145 84.1
Sopen11g010850 Solanum pennellii HOM05D000017 ORTHO05D009561 9.0e-59 230.3 134 86.6
PGSC0003DMG400004103 Solanum tuberosum HOM05D004064 ORTHO05D009561 1.5e-58 229.6 144 83.3
PGSC0003DMG400004104 Solanum tuberosum HOM05D004064 ORTHO05D009561 2.9e-57 225.3 142 81.7
Sopen09g015990 Solanum pennellii HOM05D000017 ORTHO05D000013 1.4e-56 223.0 134 84.3
Sopen10g017570 Solanum pennellii HOM05D000017 ORTHO05D009561 4.2e-56 221.5 145 80.7
Sopen02g010790 Solanum pennellii HOM05D000017 ORTHO05D009561 6.1e-55 217.6 142 80.3
Sopen01g010980 Solanum pennellii HOM05D000017 ORTHO05D009561 2.3e-54 215.7 132 84.8
Sopen03g028030 Solanum pennellii HOM05D000017 ORTHO05D009561 8.7e-54 213.8 142 76.8
Sopen06g016100 Solanum pennellii HOM05D004064 ORTHO05D009561 1.5e-53 213.0 144 77.8
Sopen01g018580 Solanum pennellii HOM05D004064 ORTHO05D009561 1.9e-53 212.6 142 77.5
PGSC0003DMG400026053 Solanum tuberosum HOM05D004064 ORTHO05D009561 3.3e-53 211.8 146 78.1
Sopen10g013120 Solanum pennellii HOM05D000017 ORTHO05D000013 2.8e-52 208.8 145 78.6
Sopen05g016460 Solanum pennellii HOM05D000004 ORTHO05D009561 9.1e-51 203.8 109 89.0
Sopen10g007460 Solanum pennellii HOM05D000017 ORTHO05D009561 1.0e-41 173.7 145 66.9
Sopen10g014100 Solanum pennellii HOM05D000017 ORTHO05D000013 1.4e-40 169.9 132 72.7
CAN.G4596.1 Capsicum annuum HOM05D004064 ORTHO05D009561 1.8e-38 162.9 144 62.5
Sopen10g021400 Solanum pennellii HOM05D000017 ORTHO05D009561 2.3e-38 162.5 111 73.0
Sopen12g028900 Solanum pennellii HOM05D037232 ORTHO05D009561 8.8e-38 160.6 97 85.6
CAN.G1759.4 Capsicum annuum HOM05D004064 ORTHO05D009561 1.3e-33 146.7 117 62.4
Sopen08g005490 Solanum pennellii HOM05D000017 ORTHO05D000013 1.4e-30 136.7 104 71.2
CAN.G257.9 Capsicum annuum HOM05D004064 ORTHO05D009561 1.3e-28 130.2 116 60.3
Sopen10g011870 Solanum pennellii HOM05D000017 ORTHO05D009561 4.8e-28 128.3 80 85.0
CAN.G362.17 Capsicum annuum HOM05D004064 ORTHO05D009561 1.4e-27 126.7 97 64.9
PGSC0003DMG400042636 Solanum tuberosum HOM05D000017 ORTHO05D009561 1.4e-27 126.7 94 72.3
CAN.G53.40 Capsicum annuum HOM05D004064 ORTHO05D009561 2.0e-26 122.9 109 59.6
Sopen07g008650 Solanum pennellii HOM05D000017 ORTHO05D009561 2.7e-26 122.5 128 54.7
CAN.G853.3 Capsicum annuum HOM05D004064 ORTHO05D009561 4.4e-21 105.1 78 66.7
Peaxi162Scf00031g02423 Petunia axillaris HOM05D000017 ORTHO05D009561 1.1e-19 100.5 139 43.2
CAN.G456.22 Capsicum annuum HOM05D000017 ORTHO05D009561 1.8e-19 99.8 97 57.7
Sopen07g011250 Solanum pennellii HOM05D000017 ORTHO05D009561 2.4e-19 99.4 69 76.8
Peaxi162Scf00375g00430 Petunia axillaris HOM05D004064 ORTHO05D009561 4.5e-18 95.1 115 46.1
Peaxi162Scf00566g00021 Petunia axillaris HOM05D004064 ORTHO05D009561 1.0e-17 94.0 115 45.2
CAN.G125.3 Capsicum annuum HOM05D000017 ORTHO05D009561 2.3e-17 92.8 76 63.2
CAN.G673.18 Capsicum annuum HOM05D000541 ORTHO05D000137 3.3e-16 89.0 79 55.7
PGSC0003DMG400034895 Solanum tuberosum HOM05D004064 ORTHO05D009561 3.3e-16 89.0 119 46.2
Peaxi162Scf00004g00458 Petunia axillaris HOM05D004064 ORTHO05D009561 6.1e-15 84.7 102 45.1
Peaxi162Scf00022g00611 Petunia axillaris HOM05D004064 ORTHO05D009561 6.1e-15 84.7 124 40.3
Peaxi162Scf00553g00217 Petunia axillaris HOM05D004064 ORTHO05D009561 6.1e-15 84.7 123 39.8
CAN.G147.9 Capsicum annuum HOM05D000541 ORTHO05D009561 8.0e-15 84.3 51 74.5
Peaxi162Scf00270g00413 Petunia axillaris HOM05D004064 ORTHO05D009561 5.2e-14 81.6 139 38.1
Nitab4.5_0002581g0010 Nicotiana tabacum HOM05D004064 ORTHO05D009909 6.8e-14 81.3 108 43.5
Nitab4.5_0003892g0010 Nicotiana tabacum HOM05D004064 ORTHO05D009561 8.9e-14 80.9 107 42.1
Peaxi162Scf01238g00022 Petunia axillaris HOM05D004064 ORTHO05D009561 8.9e-14 80.9 107 41.1
Nitab4.5_0007351g0040 Nicotiana tabacum HOM05D004064 ORTHO05D009909 2.0e-13 79.7 106 44.3
PGSC0003DMG400046188 Solanum tuberosum HOM05D004064 ORTHO05D011910 5.7e-13 78.2 109 38.5
PGSC0003DMG400039926 Solanum tuberosum HOM05D004064 ORTHO05D011910 2.2e-12 76.3 109 37.6
Nitab4.5_0005665g0070 Nicotiana tabacum HOM05D004064 ORTHO05D009909 2.8e-12 75.9 107 41.1
PGSC0003DMG400017950 Solanum tuberosum HOM05D004064 ORTHO05D009561 2.8e-12 75.9 139 35.3
Nitab4.5_0021453g0010 Nicotiana tabacum HOM05D004064 ORTHO05D009909 8.3e-12 74.3 141 36.2
Nitab4.5_0001499g0080 Nicotiana tabacum HOM05D004064 ORTHO05D009561 1.1e-11 73.9 111 40.5
CAN.G318.3 Capsicum annuum HOM05D000017 ORTHO05D009561 2.4e-11 72.8 71 54.9
Sopen02g009320 Solanum pennellii HOM05D000017 ORTHO05D011910 2.4e-11 72.8 107 36.4
Nitab4.5_0002311g0030 Nicotiana tabacum HOM05D004064 ORTHO05D009909 3.1e-11 72.4 78 43.6
Nitab4.5_0002845g0010 Nicotiana tabacum HOM05D004064 ORTHO05D009561 3.1e-11 72.4 130 37.7
Nitab4.5_0005436g0040 Nicotiana tabacum HOM05D006921 ORTHO05D009185 4.1e-11 72.0 103 39.8
Peaxi162Scf00296g00035 Petunia axillaris HOM05D004064 ORTHO05D009561 5.4e-11 71.6 91 44.0
Sopen11g024710 Solanum pennellii HOM05D000002 ORTHO05D000001 9.2e-11 70.9 107 35.5
Nitab4.5_0001023g0170 Nicotiana tabacum HOM05D004064 ORTHO05D009561 1.2e-10 70.5 99 43.4
Sopen02g010180 Solanum pennellii HOM05D000017 ORTHO05D009909 1.2e-10 70.5 82 43.9
Sopen02g014660 Solanum pennellii HOM05D000017 ORTHO05D011910 1.2e-10 70.5 139 33.1
Sopen04g015180 Solanum pennellii HOM05D000004 ORTHO05D011910 1.2e-10 70.5 139 33.1
Sopen04g022370 Solanum pennellii HOM05D000017 ORTHO05D011910 1.2e-10 70.5 107 35.5
Sopen05g004820 Solanum pennellii HOM05D000072 ORTHO05D011910 1.2e-10 70.5 139 33.1
Sopen08g005960 Solanum pennellii HOM05D004064 ORTHO05D011910 1.2e-10 70.5 104 35.6
Sopen08g008550 Solanum pennellii HOM05D004064 ORTHO05D011910 1.2e-10 70.5 139 33.1
Sopen01g020720 Solanum pennellii HOM05D004064 ORTHO05D011910 1.6e-10 70.1 122 33.6
Sopen10g028660 Solanum pennellii HOM05D004064 ORTHO05D009561 1.6e-10 70.1 70 52.9
Peaxi162Scf00007g00831 Petunia axillaris HOM05D006921 ORTHO05D009185 3.5e-10 68.9 105 40.0
Peaxi162Scf00010g00072 Petunia axillaris HOM05D006921 ORTHO05D009185 3.5e-10 68.9 110 39.1
Sopen05g016400 Solanum pennellii HOM05D000017 ORTHO05D011910 3.5e-10 68.9 107 34.6
PGSC0003DMG400014991 Solanum tuberosum HOM05D004064 ORTHO05D009561 4.5e-10 68.6 105 36.2
CAN.G563.3 Capsicum annuum HOM05D000017 ORTHO05D009561 1.0e-09 67.4 110 41.8
Nitab4.5_0005436g0020 Nicotiana tabacum HOM05D006921 ORTHO05D009185 1.0e-09 67.4 136 34.6
Sopen09g011110 Solanum pennellii HOM05D000017 ORTHO05D011910 1.0e-09 67.4 139 32.4
Peaxi162Scf00086g00199 Petunia axillaris HOM05D006921 ORTHO05D009185 2.3e-09 66.2 109 34.9
Peaxi162Scf00268g00039 Petunia axillaris HOM05D006921 ORTHO05D009185 2.9e-09 65.9 88 39.8
PGSC0003DMG400031418 Solanum tuberosum HOM05D004064 ORTHO05D009561 3.8e-09 65.5 99 35.4
Nitab4.5_0004504g0070 Nicotiana tabacum HOM05D004064 ORTHO05D009561 5.0e-09 65.1 99 39.4
Sopen03g017620 Solanum pennellii HOM05D004064 ORTHO05D009561 5.0e-09 65.1 136 33.1
Nitab4.5_0001041g0110 Nicotiana tabacum HOM05D006921 ORTHO05D009185 6.6e-09 64.7 83 41.0
PGSC0003DMG400046845 Solanum tuberosum HOM05D004064 ORTHO05D009561 6.6e-09 64.7 68 45.6
Solyc07g042497.1 Solanum lycopersicum HOM05D004064 ORTHO05D011910 8.6e-09 64.3 140 32.1
Nitab4.5_0005016g0010 Nicotiana tabacum HOM05D006921 ORTHO05D009185 1.5e-08 63.5 82 40.2
Peaxi162Scf00033g00082 Petunia axillaris HOM05D004064 ORTHO05D009561 1.5e-08 63.5 83 43.4
Nitab4.5_0004576g0020 Nicotiana tabacum HOM05D006921 ORTHO05D009185 1.9e-08 63.2 86 39.5
Sopen05g002620 Solanum pennellii HOM05D000017 ORTHO05D011910 1.9e-08 63.2 107 32.7
Peaxi162Scf00780g01011 Petunia axillaris HOM05D004064 ORTHO05D009561 2.5e-08 62.8 62 46.8
Solyc05g041970.1 Solanum lycopersicum HOM05D004064 ORTHO05D009561 2.5e-08 62.8 68 48.5
PGSC0003DMG400011366 Solanum tuberosum HOM05D022869 ORTHO05D023010 2.5e-08 62.8 101 34.7
Peaxi162Scf00136g01915 Petunia axillaris HOM05D006921 ORTHO05D009185 3.3e-08 62.4 83 37.3
Solyc11g010817.1 Solanum lycopersicum HOM05D022869 ORTHO05D023010 5.6e-08 61.6 145 34.5
Peaxi162Scf00108g00115 Petunia axillaris HOM05D004064 ORTHO05D009561 7.3e-08 61.2 63 50.8
Sopen01g016940 Solanum pennellii HOM05D004064 ORTHO05D009909 7.3e-08 61.2 74 47.3
Sopen12g025840 Solanum pennellii HOM05D000014 ORTHO05D011910 7.3e-08 61.2 66 42.4
CAN.G83.8 Capsicum annuum HOM05D004064 ORTHO05D009561 1.2e-07 60.5 102 35.3
Solyc12g035525.1 Solanum lycopersicum HOM05D006921 ORTHO05D009185 1.2e-07 60.5 110 38.2
Peaxi162Scf00591g00515 Petunia axillaris HOM05D006921 ORTHO05D009185 1.6e-07 60.1 132 33.3
Sopen10g005830 Solanum pennellii HOM05D000017 ORTHO05D011910 1.6e-07 60.1 107 31.8
Sopen10g022390 Solanum pennellii HOM05D000017 ORTHO05D000013 1.6e-07 60.1 146 34.2
Nitab4.5_0001461g0090 Nicotiana tabacum HOM05D004064 ORTHO05D009561 2.1e-07 59.7 77 41.6
Nitab4.5_0003166g0020 Nicotiana tabacum HOM05D004064 ORTHO05D009909 2.1e-07 59.7 72 43.1
Nitab4.5_0004688g0070 Nicotiana tabacum HOM05D006921 ORTHO05D009185 2.1e-07 59.7 90 38.9
Peaxi162Scf00848g00013 Petunia axillaris HOM05D006921 ORTHO05D009185 3.6e-07 58.9 125 31.2
Sopen05g014940 Solanum pennellii HOM05D004064 ORTHO05D009909 3.6e-07 58.9 77 44.2
PGSC0003DMG400025344 Solanum tuberosum HOM05D004064 ORTHO05D009561 4.7e-07 58.5 88 40.9
PGSC0003DMG400043277 Solanum tuberosum HOM05D004064 ORTHO05D009909 4.7e-07 58.5 69 43.5
Sopen02g003610 Solanum pennellii HOM05D000017 ORTHO05D000013 6.1e-07 58.2 113 35.4
Sopen02g013230 Solanum pennellii HOM05D000017 ORTHO05D000013 6.1e-07 58.2 113 35.4
Sopen08g008450 Solanum pennellii HOM05D000017 ORTHO05D000013 6.1e-07 58.2 113 35.4
Sopen08g030170 Solanum pennellii HOM05D000017 ORTHO05D000013 6.1e-07 58.2 113 35.4
Sopen09g020620 Solanum pennellii HOM05D000017 ORTHO05D000013 6.1e-07 58.2 113 35.4
Sopen12g016630 Solanum pennellii HOM05D000017 ORTHO05D000013 6.1e-07 58.2 113 35.4
Sopen12g020620 Solanum pennellii HOM05D000017 ORTHO05D000013 6.1e-07 58.2 98 37.8
Sopen12g026920 Solanum pennellii HOM05D000017 ORTHO05D000013 6.1e-07 58.2 113 35.4
Nitab4.5_0004599g0050 Nicotiana tabacum HOM05D006921 ORTHO05D009185 8.0e-07 57.8 91 36.3
Solyc07g032784.1 Solanum lycopersicum HOM05D006921 ORTHO05D009185 8.0e-07 57.8 98 38.8
Sopen01g026090 Solanum pennellii HOM05D006921 ORTHO05D009185 8.0e-07 57.8 115 33.9
PGSC0003DMG400037601 Solanum tuberosum HOM05D010431 ORTHO05D016891 8.0e-07 57.8 98 36.7
Sopen01g027250 Solanum pennellii HOM05D000017 ORTHO05D000013 1.4e-06 57.0 70 41.4
Sopen02g036070 Solanum pennellii HOM05D000017 ORTHO05D000013 1.4e-06 57.0 70 41.4
Sopen03g005240 Solanum pennellii HOM05D000017 ORTHO05D009185 1.4e-06 57.0 70 41.4
Sopen04g019600 Solanum pennellii HOM05D000017 ORTHO05D000013 1.4e-06 57.0 70 41.4
Sopen04g025160 Solanum pennellii HOM05D000017 ORTHO05D000013 1.4e-06 57.0 70 41.4
Sopen05g025220 Solanum pennellii HOM05D000017 ORTHO05D000013 1.4e-06 57.0 70 41.4
Sopen08g012130 Solanum pennellii HOM05D000017 ORTHO05D000013 1.4e-06 57.0 70 41.4
Sopen08g021210 Solanum pennellii HOM05D000017 ORTHO05D000013 1.4e-06 57.0 70 41.4
Sopen10g027160 Solanum pennellii HOM05D000017 ORTHO05D000013 1.4e-06 57.0 70 41.4
Peaxi162Scf00174g01017 Petunia axillaris HOM05D000017 ORTHO05D015725 1.8e-06 56.6 106 37.7
PGSC0003DMG400012698 Solanum tuberosum HOM05D004064 ORTHO05D009909 1.8e-06 56.6 73 43.8
Nitab4.5_0003194g0020 Nicotiana tabacum HOM05D004064 ORTHO05D009561 2.3e-06 56.2 99 37.4
Peaxi162Scf00288g01114 Petunia axillaris HOM05D006921 ORTHO05D009185 2.3e-06 56.2 138 31.2
Nitab4.5_0001507g0090 Nicotiana tabacum HOM05D004064 ORTHO05D009561 3.0e-06 55.8 73 45.2
Peaxi162Scf00147g00129 Petunia axillaris HOM05D000017 ORTHO05D001349 3.0e-06 55.8 89 37.1
Peaxi162Scf00209g00944 Petunia axillaris HOM05D000017 ORTHO05D009364 3.0e-06 55.8 89 37.1
Sopen10g027790 Solanum pennellii HOM05D006921 ORTHO05D009185 3.0e-06 55.8 110 36.4
Sopen12g012540 Solanum pennellii HOM05D000017 ORTHO05D000013 4.0e-06 55.5 112 34.8
Sopen12g010990 Solanum pennellii HOM05D000017 ORTHO05D000013 5.2e-06 55.1 82 37.8
Peaxi162Scf00100g00816 Petunia axillaris HOM05D000017 ORTHO05D009364 6.8e-06 54.7 88 36.4
Peaxi162Scf00375g00621 Petunia axillaris HOM05D000017 ORTHO05D001349 6.8e-06 54.7 127 33.9
Solyc08g061275.1 Solanum lycopersicum HOM05D004064 ORTHO05D009561 6.8e-06 54.7 79 41.8
Sopen04g023140 Solanum pennellii HOM05D000004 ORTHO05D000002 6.8e-06 54.7 89 36.0
Sopen10g006650 Solanum pennellii HOM05D000017 ORTHO05D000013 6.8e-06 54.7 70 40.0
Nitab4.5_0002244g0030 Nicotiana tabacum HOM05D006921 ORTHO05D009185 8.9e-06 54.3 121 34.7
Sopen09g015000 Solanum pennellii HOM05D004064 ORTHO05D009909 8.9e-06 54.3 56 46.4
Sopen12g021170 Solanum pennellii HOM05D000017 ORTHO05D000013 8.9e-06 54.3 70 40.0


User provided reference genes

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