Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen01g008500 Solanum pennellii HOM05D000053 ORTHO05D000035 1.5e-43 179.9 148 100.0
CAN.G1527.1 Capsicum annuum HOM05D000053 ORTHO05D000035 1.5e-27 126.7 144 68.8
Solyc01g008390.3 Solanum lycopersicum HOM05D000053 ORTHO05D000035 9.8e-24 114.0 135 88.1
CAN.G282.25 Capsicum annuum HOM05D000053 ORTHO05D000035 4.1e-22 108.6 127 86.6
CAN.G911.18 Capsicum annuum HOM05D000053 ORTHO05D000035 1.6e-21 106.7 130 70.0
Solyc01g008410.3 Solanum lycopersicum HOM05D000053 ORTHO05D000035 2.1e-21 106.3 177 66.7
CAN.G282.100 Capsicum annuum HOM05D000013 ORTHO05D000011 2.3e-20 102.8 176 67.0
CAN.G911.21 Capsicum annuum HOM05D000053 ORTHO05D000035 2.3e-20 102.8 127 51.2
CAN.G911.14 Capsicum annuum HOM05D000053 ORTHO05D000035 3.0e-20 102.4 127 70.9
CAN.G911.22 Capsicum annuum HOM05D000053 ORTHO05D000035 5.1e-20 101.7 135 80.7
Sopen01g003920 Solanum pennellii HOM05D000053 ORTHO05D000035 6.6e-20 101.3 177 66.7
CAN.G282.24 Capsicum annuum HOM05D000053 ORTHO05D000035 8.6e-20 100.9 181 65.2
CAN.G911.16 Capsicum annuum HOM05D000053 ORTHO05D000035 1.5e-19 100.1 127 84.3
PGSC0003DMG400016357 Solanum tuberosum HOM05D000053 ORTHO05D000035 1.5e-19 100.1 135 82.2
CAN.G158.30 Capsicum annuum HOM05D000053 ORTHO05D000035 1.9e-19 99.8 135 78.5
CAN.G282.38 Capsicum annuum HOM05D000053 ORTHO05D000035 1.9e-19 99.8 165 59.4
CAN.G911.15 Capsicum annuum HOM05D000053 ORTHO05D000035 1.9e-19 99.8 131 83.2
PGSC0003DMG401021049 Solanum tuberosum HOM05D000053 ORTHO05D000035 1.9e-19 99.8 186 65.6
CAN.G282.30 Capsicum annuum HOM05D000053 ORTHO05D000035 2.5e-19 99.4 135 79.3
CAN.G282.21 Capsicum annuum HOM05D000053 ORTHO05D000035 7.3e-19 97.8 127 85.8
CAN.G911.24 Capsicum annuum HOM05D000053 ORTHO05D000035 1.2e-18 97.1 127 82.7
CAN.G282.27 Capsicum annuum HOM05D000053 ORTHO05D000035 2.1e-18 96.3 127 83.5
CAN.G143.39 Capsicum annuum HOM05D000053 ORTHO05D000035 4.7e-18 95.1 127 84.3
CAN.G282.17 Capsicum annuum HOM05D000053 ORTHO05D000035 4.7e-18 95.1 127 83.5
CAN.G911.13 Capsicum annuum HOM05D000053 ORTHO05D000035 4.7e-18 95.1 123 85.4
CAN.G282.29 Capsicum annuum HOM05D000053 ORTHO05D000035 8.1e-18 94.4 127 82.7
CAN.G282.31 Capsicum annuum HOM05D000053 ORTHO05D000035 8.1e-18 94.4 127 82.7
PGSC0003DMG400005226 Solanum tuberosum HOM05D000053 ORTHO05D000035 8.1e-18 94.4 136 79.4
PGSC0003DMG400021051 Solanum tuberosum HOM05D000053 ORTHO05D000035 1.1e-17 94.0 137 79.6
CAN.G282.33 Capsicum annuum HOM05D000053 ORTHO05D000035 1.4e-17 93.6 178 63.5
PGSC0003DMG400031283 Solanum tuberosum HOM05D000053 ORTHO05D000035 1.8e-17 93.2 135 69.6
CAN.G257.92 Capsicum annuum HOM05D000053 ORTHO05D000035 2.3e-17 92.8 134 80.6
Sopen01g008230 Solanum pennellii HOM05D000053 ORTHO05D000035 4.0e-17 92.0 137 43.1
CAN.G257.38 Capsicum annuum HOM05D000053 ORTHO05D000035 5.2e-17 91.7 138 42.0
CAN.G282.20 Capsicum annuum HOM05D000053 ORTHO05D000035 6.8e-17 91.3 135 78.5
PGSC0003DMG400032130 Solanum tuberosum HOM05D000053 ORTHO05D000035 1.5e-16 90.1 135 79.3
CAN.G282.99 Capsicum annuum HOM05D000053 ORTHO05D000035 2.0e-16 89.7 132 81.1
Solyc01g009700.3 Solanum lycopersicum HOM05D000053 ORTHO05D000035 2.0e-16 89.7 144 72.9
CAN.G608.6 Capsicum annuum HOM05D000053 ORTHO05D000035 3.4e-16 89.0 129 48.1
Sopen01g001770 Solanum pennellii HOM05D000053 ORTHO05D000035 4.4e-16 88.6 136 76.5
Solyc01g009930.3 Solanum lycopersicum HOM05D000053 ORTHO05D000035 7.5e-16 87.8 136 77.2
Solyc01g005780.1 Solanum lycopersicum HOM05D000053 ORTHO05D000035 9.9e-16 87.4 136 75.7
Sopen01g002540 Solanum pennellii HOM05D000053 ORTHO05D000035 2.2e-15 86.3 128 81.2
Sopen01g008240 Solanum pennellii HOM05D000053 ORTHO05D000035 2.9e-15 85.9 126 66.7
Sopen01g001720 Solanum pennellii HOM05D000053 ORTHO05D000035 4.9e-15 85.1 127 80.3
Solyc01g005720.3 Solanum lycopersicum HOM05D000053 ORTHO05D000035 8.3e-15 84.3 126 81.0
Solyc01g005760.3 Solanum lycopersicum HOM05D000053 ORTHO05D000035 8.3e-15 84.3 128 79.7
CAN.G282.34 Capsicum annuum HOM05D000053 ORTHO05D000035 1.9e-14 83.2 51 78.4
Nitab4.5_0009084g0020 Nicotiana tabacum HOM05D000053 ORTHO05D000035 1.9e-14 83.2 136 77.2
PGSC0003DMG400031284 Solanum tuberosum HOM05D000053 ORTHO05D000035 1.9e-14 83.2 135 74.8
Solyc01g005730.3 Solanum lycopersicum HOM05D000053 ORTHO05D000035 2.4e-14 82.8 128 79.7
Sopen01g001730 Solanum pennellii HOM05D000053 ORTHO05D000035 2.4e-14 82.8 128 79.7
Nitab4.5_0002932g0020 Nicotiana tabacum HOM05D000053 ORTHO05D000035 3.2e-14 82.4 135 78.5
Solyc01g014160.1 Solanum lycopersicum HOM05D000053 ORTHO05D000035 3.2e-14 82.4 113 89.4
Sopen01g003910 Solanum pennellii HOM05D000053 ORTHO05D000035 3.2e-14 82.4 47 89.4
Solyc01g006550.3 Solanum lycopersicum HOM05D000053 ORTHO05D000035 4.1e-14 82.0 128 79.7
Solyc01g009690.3 Solanum lycopersicum HOM05D000053 ORTHO05D000035 4.1e-14 82.0 128 79.7
Nitab4.5_0027046g0010 Nicotiana tabacum HOM05D000053 ORTHO05D000035 2.1e-13 79.7 136 75.0
Sopen01g001750 Solanum pennellii HOM05D000053 ORTHO05D000035 2.7e-13 79.3 126 79.4
CAN.G702.47 Capsicum annuum HOM05D000053 ORTHO05D000035 3.5e-13 79.0 127 69.3
Nitab4.5_0007678g0050 Nicotiana tabacum HOM05D000053 ORTHO05D000035 4.6e-13 78.6 136 74.3
CAN.G282.37 Capsicum annuum HOM05D000053 ORTHO05D000035 6.0e-13 78.2 128 37.5
Nitab4.5_0001730g0090 Nicotiana tabacum HOM05D000053 ORTHO05D000035 6.0e-13 78.2 136 72.8
CAN.G257.93 Capsicum annuum HOM05D000053 ORTHO05D000035 1.3e-12 77.0 118 83.1
Solyc12g100020.1 Solanum lycopersicum HOM05D000053 ORTHO05D000035 1.7e-12 76.6 128 37.5
Nitab4.5_0001730g0100 Nicotiana tabacum HOM05D000053 ORTHO05D000035 3.9e-12 75.5 136 74.3
Nitab4.5_0002932g0010 Nicotiana tabacum HOM05D000053 ORTHO05D000035 3.9e-12 75.5 135 75.6
Peaxi162Scf00086g00054 Petunia axillaris HOM05D000053 ORTHO05D000035 3.9e-12 75.5 128 37.5
Nitab4.5_0009034g0020 Nicotiana tabacum HOM05D000053 ORTHO05D000035 1.1e-11 73.9 136 74.3
Peaxi162Scf00635g00019 Petunia axillaris HOM05D000053 ORTHO05D000035 1.1e-11 73.9 127 76.4
CAN.G866.29 Capsicum annuum HOM05D000053 ORTHO05D000035 1.9e-11 73.2 129 38.8
Nitab4.5_0014151g0020 Nicotiana tabacum HOM05D000053 ORTHO05D000035 1.9e-11 73.2 128 76.6
Nitab4.5_0009084g0010 Nicotiana tabacum HOM05D000053 ORTHO05D000035 3.3e-11 72.4 136 74.3
CAN.G911.10 Capsicum annuum HOM05D000053 ORTHO05D000035 4.3e-11 72.0 47 72.3
Sopen01g001870 Solanum pennellii HOM05D000053 ORTHO05D000035 5.6e-11 71.6 126 77.0
CAN.G911.12 Capsicum annuum HOM05D000053 ORTHO05D000035 7.3e-11 71.2 47 72.3
Solyc01g005870.3 Solanum lycopersicum HOM05D000053 ORTHO05D000035 2.1e-10 69.7 122 78.7
Nitab4.5_0004418g0010 Nicotiana tabacum HOM05D000053 ORTHO05D000035 8.1e-10 67.8 128 71.9
CAN.G1735.6 Capsicum annuum HOM05D000053 ORTHO05D000035 1.4e-09 67.0 138 66.7
CAN.G484.20 Capsicum annuum HOM05D000053 ORTHO05D000035 2.4e-09 66.2 127 74.0
CAN.G2177.3 Capsicum annuum HOM05D000053 ORTHO05D000035 4.0e-09 65.5 129 74.4
CAN.G575.9 Capsicum annuum HOM05D000053 ORTHO05D000035 5.2e-09 65.1 127 58.3
CAN.G575.8 Capsicum annuum HOM05D000053 ORTHO05D000035 1.2e-08 63.9 127 71.7
Nitab4.5_0008760g0010 Nicotiana tabacum HOM05D000053 ORTHO05D000035 1.2e-08 63.9 128 74.2
Nitab4.5_0011909g0010 Nicotiana tabacum HOM05D000053 ORTHO05D000035 1.2e-08 63.9 134 66.4
Solyc12g099950.3 Solanum lycopersicum HOM05D000053 ORTHO05D000035 1.2e-08 63.9 129 72.1
PGSC0003DMG401023870 Solanum tuberosum HOM05D000132 ORTHO05D000058 1.2e-08 63.9 52 61.5
CAN.G282.19 Capsicum annuum HOM05D000053 ORTHO05D000035 2.0e-08 63.2 101 88.1
PGSC0003DMG400004284 Solanum tuberosum HOM05D000053 ORTHO05D000035 2.0e-08 63.2 127 71.7
CAN.G1579.25 Capsicum annuum HOM05D000053 ORTHO05D000035 2.6e-08 62.8 129 72.9
CAN.G2075.3 Capsicum annuum HOM05D000053 ORTHO05D000035 2.6e-08 62.8 129 72.9
Solyc12g049190.3 Solanum lycopersicum HOM05D000053 ORTHO05D000035 2.6e-08 62.8 127 70.9
Sopen12g023650 Solanum pennellii HOM05D000053 ORTHO05D000035 2.6e-08 62.8 127 70.9
PGSC0003DMG400023869 Solanum tuberosum HOM05D000053 ORTHO05D000035 2.6e-08 62.8 129 72.9
PGSC0003DMG400023863 Solanum tuberosum HOM05D000053 ORTHO05D000035 3.4e-08 62.4 128 71.9
CAN.G208.71 Capsicum annuum HOM05D000053 ORTHO05D000035 4.4e-08 62.0 111 78.4
PGSC0003DMG400023864 Solanum tuberosum HOM05D000053 ORTHO05D000035 4.4e-08 62.0 130 72.3
CAN.G484.15 Capsicum annuum HOM05D000053 ORTHO05D000035 7.6e-08 61.2 128 72.7
CAN.G575.74 Capsicum annuum HOM05D000053 ORTHO05D000035 7.6e-08 61.2 129 71.3
Peaxi162Scf00062g00928 Petunia axillaris HOM05D000053 ORTHO05D000035 7.6e-08 61.2 127 73.2
PGSC0003DMG400039627 Solanum tuberosum HOM05D000053 ORTHO05D000035 7.6e-08 61.2 127 70.1
Peaxi162Scf00306g00043 Petunia axillaris HOM05D000053 ORTHO05D000035 9.9e-08 60.8 127 70.9
Solyc12g100030.2 Solanum lycopersicum HOM05D000053 ORTHO05D000035 9.9e-08 60.8 127 72.4
CAN.G575.85 Capsicum annuum HOM05D000053 ORTHO05D000035 1.3e-07 60.5 129 72.9
PGSC0003DMG402004726 Solanum tuberosum HOM05D000053 ORTHO05D000035 1.3e-07 60.5 129 71.3
Peaxi162Scf00086g00436 Petunia axillaris HOM05D000053 ORTHO05D000035 1.7e-07 60.1 128 72.7
Peaxi162Scf00299g00111 Petunia axillaris HOM05D000053 ORTHO05D000035 1.7e-07 60.1 137 67.9
PGSC0003DMG400013898 Solanum tuberosum HOM05D000053 ORTHO05D000035 1.7e-07 60.1 127 70.9
PGSC0003DMG400017967 Solanum tuberosum HOM05D000053 ORTHO05D000035 1.7e-07 60.1 128 69.5
PGSC0003DMG401004726 Solanum tuberosum HOM05D000053 ORTHO05D000035 1.7e-07 60.1 129 70.5
PGSC0003DMG402023866 Solanum tuberosum HOM05D000053 ORTHO05D000035 1.7e-07 60.1 128 69.5
CAN.G575.104 Capsicum annuum HOM05D000033 ORTHO05D007915 2.2e-07 59.7 129 48.1
Lj5P391T36 Lonicera japonica HOM05D000053 ORTHO05D000035 2.2e-07 59.7 127 70.9
PGSC0003DMG400023867 Solanum tuberosum HOM05D000053 ORTHO05D000035 2.2e-07 59.7 128 71.1
CAN.G1833.4 Capsicum annuum HOM05D000053 ORTHO05D000035 2.9e-07 59.3 129 72.9
Sopen12g034500 Solanum pennellii HOM05D000053 ORTHO05D000035 2.9e-07 59.3 126 72.2
CAN.G575.83 Capsicum annuum HOM05D000053 ORTHO05D000035 3.8e-07 58.9 129 71.3
CAN.G793.60 Capsicum annuum HOM05D000053 ORTHO05D000035 3.8e-07 58.9 129 72.9
Peaxi162Scf00646g00009 Petunia axillaris HOM05D000053 ORTHO05D000035 3.8e-07 58.9 52 61.5
Solyc10g051220.3 Solanum lycopersicum HOM05D000053 ORTHO05D000035 3.8e-07 58.9 122 36.1
CAN.G1579.21 Capsicum annuum HOM05D000053 ORTHO05D000035 4.9e-07 58.5 53 58.5
CAN.G2075.4 Capsicum annuum HOM05D000053 ORTHO05D000035 4.9e-07 58.5 53 58.5
Nitab4.5_0002757g0070 Nicotiana tabacum HOM05D000053 ORTHO05D000035 4.9e-07 58.5 129 62.0
Solyc12g099870.3 Solanum lycopersicum HOM05D000053 ORTHO05D000035 4.9e-07 58.5 126 72.2
CAN.G575.10 Capsicum annuum HOM05D000053 ORTHO05D000035 6.4e-07 58.2 127 67.7
CAN.G575.127 Capsicum annuum HOM05D000053 ORTHO05D000035 6.4e-07 58.2 111 78.4
Solyc06g008270.2 Solanum lycopersicum HOM05D000053 ORTHO05D000035 6.4e-07 58.2 127 69.3
PGSC0003DMG401002869 Solanum tuberosum HOM05D000053 ORTHO05D000035 6.4e-07 58.2 128 72.7
CAN.G21.7 Capsicum annuum HOM05D000053 ORTHO05D000035 8.4e-07 57.8 145 31.0
CAN.G484.11 Capsicum annuum HOM05D000053 ORTHO05D000035 8.4e-07 57.8 127 70.1
Nitab4.5_0006164g0060 Nicotiana tabacum HOM05D000053 ORTHO05D000035 8.4e-07 57.8 129 64.3
Solyc12g100010.1 Solanum lycopersicum HOM05D000053 ORTHO05D000035 8.4e-07 57.8 128 73.4
Sopen00g010090 Solanum pennellii HOM05D000053 ORTHO05D000035 8.4e-07 57.8 127 71.7
CAN.G1484.12 Capsicum annuum HOM05D002496 ORTHO05D002787 1.1e-06 57.4 106 55.7
Sopen06g003150 Solanum pennellii HOM05D000053 ORTHO05D000035 1.1e-06 57.4 127 68.5
CAN.G518.10 Capsicum annuum HOM05D000541 ORTHO05D000137 1.4e-06 57.0 148 29.7
CAN.G575.115 Capsicum annuum HOM05D000053 ORTHO05D000035 1.4e-06 57.0 129 71.3
CAN.G767.21 Capsicum annuum HOM05D000053 ORTHO05D000058 1.4e-06 57.0 129 71.3
CAN.G941.13 Capsicum annuum HOM05D000053 ORTHO05D000035 1.4e-06 57.0 133 69.2
Lj5P396T35 Lonicera japonica HOM05D000053 ORTHO05D000035 1.4e-06 57.0 47 57.4
PGSC0003DMG400014718 Solanum tuberosum HOM05D000053 ORTHO05D000035 1.4e-06 57.0 127 69.3
Thecc.07G158300 Theobroma cacao HOM05D000053 ORTHO05D000035 1.4e-06 57.0 48 58.3
CAN.G575.68 Capsicum annuum HOM05D000053 ORTHO05D000035 1.9e-06 56.6 126 72.2
CAN.G575.7 Capsicum annuum HOM05D000053 ORTHO05D000035 1.9e-06 56.6 127 69.3
Solyc12g006020.1 Solanum lycopersicum HOM05D000053 ORTHO05D000035 1.9e-06 56.6 127 68.5
CAN.G257.39 Capsicum annuum HOM05D000053 ORTHO05D000035 2.4e-06 56.2 101 84.2
Solyc06g008300.4 Solanum lycopersicum HOM05D000053 ORTHO05D000035 2.4e-06 56.2 127 69.3
PGSC0003DMG400031448 Solanum tuberosum HOM05D000053 ORTHO05D000035 2.4e-06 56.2 127 69.3
Lj5P450T7 Lonicera japonica HOM05D000053 ORTHO05D000035 3.2e-06 55.8 127 70.1
Sopen03g006290 Solanum pennellii HOM05D000053 ORTHO05D000035 3.2e-06 55.8 123 71.5
Sopen06g003130 Solanum pennellii HOM05D000053 ORTHO05D000035 3.2e-06 55.8 128 70.3
Sopen12g034600 Solanum pennellii HOM05D000053 ORTHO05D000035 3.2e-06 55.8 127 70.9
PGSC0003DMG400004727 Solanum tuberosum HOM05D000053 ORTHO05D000035 3.2e-06 55.8 112 75.9
PGSC0003DMG400011611 Solanum tuberosum HOM05D000053 ORTHO05D000035 3.2e-06 55.8 128 69.5
PGSC0003DMG400014717 Solanum tuberosum HOM05D000053 ORTHO05D000035 3.2e-06 55.8 111 76.6
CAN.G575.70 Capsicum annuum HOM05D000053 ORTHO05D000035 4.2e-06 55.5 111 77.5
PGSC0003DMG400014719 Solanum tuberosum HOM05D000053 ORTHO05D000035 4.2e-06 55.5 133 68.4
PGSC0003DMG400017969 Solanum tuberosum HOM05D000053 ORTHO05D000035 4.2e-06 55.5 128 71.9
PGSC0003DMG400033632 Solanum tuberosum HOM05D000053 ORTHO05D000035 4.2e-06 55.5 126 67.5
Sopen03g006300 Solanum pennellii HOM05D000053 ORTHO05D000035 5.4e-06 55.1 129 69.8
CAN.G1002.25 Capsicum annuum HOM05D000053 ORTHO05D000035 7.1e-06 54.7 128 70.3
HanXRQChr10g0280691 Helianthus annuus HOM05D000053 ORTHO05D000035 7.1e-06 54.7 42 61.9
Sopen12g001990 Solanum pennellii HOM05D000053 ORTHO05D000035 7.1e-06 54.7 127 68.5
PGSC0003DMG400005541 Solanum tuberosum HOM05D000053 ORTHO05D000035 7.1e-06 54.7 127 70.1
CAN.G1579.22 Capsicum annuum HOM05D000053 ORTHO05D000035 9.2e-06 54.3 111 77.5
Lsat_1_v5_gn_7_97801 Lactuca sativa HOM05D000053 ORTHO05D000035 9.2e-06 54.3 45 62.2
PGSC0003DMG400038990 Solanum tuberosum HOM05D000053 ORTHO05D000035 9.2e-06 54.3 129 68.2


User provided reference genes

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